Diff of the two buildlogs:

--
--- b1/build.log	2025-08-02 03:56:29.239110481 +0000
+++ b2/build.log	2025-08-02 04:27:21.481762041 +0000
@@ -1,6 +1,6 @@
 I: pbuilder: network access will be disabled during build
-I: Current time: Thu Sep  3 21:56:09 -12 2026
-I: pbuilder-time-stamp: 1788515769
+I: Current time: Sat Aug  2 17:56:35 +14 2025
+I: pbuilder-time-stamp: 1754106995
 I: Building the build Environment
 I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
 I: copying local configuration
@@ -53,52 +53,84 @@
 dpkg-source: info: applying 0028-Fix-pip-invocation.patch
 I: Not using root during the build.
 I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/4083414/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/2558029/tmp/hooks/D01_modify_environment starting
+debug: Running on ionos1-amd64.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Aug  2 03:57 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/2558029/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/2558029/tmp/hooks/D02_print_environment starting
 I: set
-  BUILDDIR='/build/reproducible-path'
-  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
-  BUILDUSERNAME='pbuilder1'
-  BUILD_ARCH='amd64'
-  DEBIAN_FRONTEND='noninteractive'
-  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 '
-  DISTRIBUTION='unstable'
-  HOME='/root'
-  HOST_ARCH='amd64'
+  BASH=/bin/sh
+  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+  BASH_ALIASES=()
+  BASH_ARGC=()
+  BASH_ARGV=()
+  BASH_CMDS=()
+  BASH_LINENO=([0]="12" [1]="0")
+  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+  BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
+  BASH_VERSION='5.2.37(1)-release'
+  BUILDDIR=/build/reproducible-path
+  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+  BUILDUSERNAME=pbuilder2
+  BUILD_ARCH=amd64
+  DEBIAN_FRONTEND=noninteractive
+  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 '
+  DIRSTACK=()
+  DISTRIBUTION=unstable
+  EUID=0
+  FUNCNAME=([0]="Echo" [1]="main")
+  GROUPS=()
+  HOME=/root
+  HOSTNAME=i-capture-the-hostname
+  HOSTTYPE=x86_64
+  HOST_ARCH=amd64
   IFS=' 	
   '
-  INVOCATION_ID='5d0fd98dd0cd4af48ebcc1dec5dbc244'
-  LANG='C'
-  LANGUAGE='en_US:en'
-  LC_ALL='C'
-  MAIL='/var/mail/root'
-  OPTIND='1'
-  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
-  PBCURRENTCOMMANDLINEOPERATION='build'
-  PBUILDER_OPERATION='build'
-  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
-  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
-  PBUILDER_SYSCONFDIR='/etc'
-  PPID='4083414'
-  PS1='# '
-  PS2='> '
+  INVOCATION_ID=a4469798208f4149a26ee68589f41ac1
+  LANG=C
+  LANGUAGE=et_EE:et
+  LC_ALL=C
+  MACHTYPE=x86_64-pc-linux-gnu
+  MAIL=/var/mail/root
+  OPTERR=1
+  OPTIND=1
+  OSTYPE=linux-gnu
+  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+  PBCURRENTCOMMANDLINEOPERATION=build
+  PBUILDER_OPERATION=build
+  PBUILDER_PKGDATADIR=/usr/share/pbuilder
+  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+  PBUILDER_SYSCONFDIR=/etc
+  PIPESTATUS=([0]="0")
+  POSIXLY_CORRECT=y
+  PPID=2558029
   PS4='+ '
-  PWD='/'
-  SHELL='/bin/bash'
-  SHLVL='2'
-  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qV4FYMBK/pbuilderrc_V4L4 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qV4FYMBK/b1 --logfile b1/build.log cctbx_2024.10+ds2+~3.22.1+ds1-5.dsc'
-  SUDO_GID='111'
-  SUDO_UID='106'
-  SUDO_USER='jenkins'
-  TERM='unknown'
-  TZ='/usr/share/zoneinfo/Etc/GMT+12'
-  USER='root'
-  _='/usr/bin/systemd-run'
-  http_proxy='http://213.165.73.152:3128'
+  PWD=/
+  SHELL=/bin/bash
+  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+  SHLVL=3
+  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qV4FYMBK/pbuilderrc_FVB6 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qV4FYMBK/b2 --logfile b2/build.log cctbx_2024.10+ds2+~3.22.1+ds1-5.dsc'
+  SUDO_GID=110
+  SUDO_UID=105
+  SUDO_USER=jenkins
+  TERM=unknown
+  TZ=/usr/share/zoneinfo/Etc/GMT-14
+  UID=0
+  USER=root
+  _='I: set'
+  http_proxy=http://46.16.76.132:3128
 I: uname -a
-  Linux ionos15-amd64 6.12.33+deb12-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.33-1~bpo12+1 (2025-07-09) x86_64 GNU/Linux
+  Linux i-capture-the-hostname 6.1.0-37-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.140-1 (2025-05-22) x86_64 GNU/Linux
 I: ls -l /bin
-  lrwxrwxrwx 1 root root 7 May 12  2025 /bin -> usr/bin
-I: user script /srv/workspace/pbuilder/4083414/tmp/hooks/D02_print_environment finished
+  lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin
+I: user script /srv/workspace/pbuilder/2558029/tmp/hooks/D02_print_environment finished
  -> Attempting to satisfy build-dependencies
  -> Creating pbuilder-satisfydepends-dummy package
 Package: pbuilder-satisfydepends-dummy
@@ -746,7 +778,7 @@
 Get: 505 http://deb.debian.org/debian unstable/main amd64 python3-tqdm all 4.67.1-5 [90.8 kB]
 Get: 506 http://deb.debian.org/debian unstable/main amd64 python3-wxgtk4.0 amd64 4.2.3+dfsg-2 [7272 kB]
 Get: 507 http://deb.debian.org/debian unstable/main amd64 scons all 4.8.1+dfsg-1 [548 kB]
-Fetched 356 MB in 30s (12.0 MB/s)
+Fetched 356 MB in 9s (38.6 MB/s)
 Preconfiguring packages ...
 Selecting previously unselected package libsystemd-shared:amd64.
 (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19850 files and directories currently installed.)
@@ -2378,8 +2410,8 @@
 Setting up tzdata (2025b-4) ...
 
 Current default time zone: 'Etc/UTC'
-Local time is now:      Fri Sep  4 10:01:20 UTC 2026.
-Universal Time is now:  Fri Sep  4 10:01:20 UTC 2026.
+Local time is now:      Sat Aug  2 04:04:00 UTC 2025.
+Universal Time is now:  Sat Aug  2 04:04:00 UTC 2025.
 Run 'dpkg-reconfigure tzdata' if you wish to change it.
 
 Setting up libboost-atomic1.83.0:amd64 (1.83.0-4.2) ...
@@ -2838,7 +2870,11 @@
 Building tag database...
  -> Finished parsing the build-deps
 I: Building the package
-I: Running cd /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../cctbx_2024.10+ds2+~3.22.1+ds1-5_source.changes
+I: user script /srv/workspace/pbuilder/2558029/tmp/hooks/A99_set_merged_usr starting
+Not re-configuring usrmerge for unstable
+I: user script /srv/workspace/pbuilder/2558029/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../cctbx_2024.10+ds2+~3.22.1+ds1-5_source.changes
 dpkg-buildpackage: info: source package cctbx
 dpkg-buildpackage: info: source version 2024.10+ds2+~3.22.1+ds1-5
 dpkg-buildpackage: info: source distribution unstable
@@ -3055,3726 +3091,3726 @@
 I: pybuild base:311: /usr/bin/python3 setup.py build 
 running build
 running build_py
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-copying cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/glu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/gl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-copying gltbx/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/tst_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/tokenization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-copying fable/equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
-copying cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
-copying cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
-copying cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
-copying cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website
-copying cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website
-copying cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website
-copying cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
-copying cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
-copying cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
-copying cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
-copying cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
-copying boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
-copying boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
-copying boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
-copying boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-copying mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-copying scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
-copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
-copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
-copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx
+copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx
+copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx
+copying serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx
+copying rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx
+copying rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx
+copying rstbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx
+copying fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx
+copying fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx
+copying fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/log.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/configure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/configure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 copying libtbx/progress.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/log.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-copying libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx
-copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx
-copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx
+copying libtbx/containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
+copying libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
 copying wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-copying wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx
-copying rstbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx
-copying rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx
-copying rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fast_linalg
-copying fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fast_linalg
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx
-copying simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx
-copying simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx
-copying serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx
+copying wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+copying wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+copying scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx
+copying omptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx
+copying omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx
 copying qttbx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx
 copying qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
+copying smtbx/development.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
+copying smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
+copying smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
+copying smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
+copying smtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
+copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
+copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
+copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
+copying cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
+copying cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
+copying cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
+copying cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fast_linalg
+copying fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fast_linalg
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
+copying cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
+copying cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
+copying cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
+copying cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-copying iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
 copying iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx
-copying omptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx
-copying omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx
+copying iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+copying iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx
+copying simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx
+copying simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website
+copying cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website
+copying cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website
+copying cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder
+copying spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder
+copying spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder
+copying spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+copying mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/glu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/gl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+copying gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
+copying cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
 copying cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
 copying cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
 copying cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
 copying cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-copying cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
 copying cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder
-copying spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder
-copying spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder
-copying spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
-copying smtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
-copying smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
-copying smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
-copying smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
-copying smtbx/development.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx
-copying fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx
-copying fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx
-copying fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line
-copying gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line
-copying gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
-copying fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
-copying fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
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-copying boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
-copying boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
-copying boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
-copying boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
-copying boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
-copying boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
-copying boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
-copying mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
-copying mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
-copying mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
-copying mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
-copying mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
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-copying mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
-copying mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
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-copying mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
-copying mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
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-copying mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
-copying mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
-copying mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
-copying mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
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-copying mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
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-copying mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
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-copying mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
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-copying mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
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-copying mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
-copying mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
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-copying mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb
-copying mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb
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-copying mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
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-copying mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
-copying mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
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-copying mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
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-copying mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
-copying mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
-copying mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
-copying mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
-copying mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
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-copying mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks
-copying mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks
-copying mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks
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-copying mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
-copying mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
-copying mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
-copying mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
-copying mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
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-copying mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
-copying mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
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-copying mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
-copying mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
-copying mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
-copying mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
-copying mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
-copying mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
-copying mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
-copying mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model
-copying mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model
-copying mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model
-copying mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model
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-copying mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
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-copying mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-copying mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
-copying mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
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-copying mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
-copying mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
-copying mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
-copying mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
-copying mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
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-copying mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
-copying mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
-copying mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
-copying mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
-copying mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
-copying mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
-copying mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
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-copying mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
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-copying mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
-copying mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
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-copying mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
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-copying mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
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-copying mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
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-copying mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
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-copying mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
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-copying mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
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-copying mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
-copying mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
-copying mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
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-copying mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
-copying mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
-copying mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
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-copying mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
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-copying mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
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-copying mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/den
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-copying mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components
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-copying mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
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-copying mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
-copying mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
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-copying mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
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-copying mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce
-copying mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce
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-copying mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
-copying mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
-copying mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
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-copying xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
-copying xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
-copying xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
+copying cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+copying cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/tokenization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/tst_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+copying fable/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
+copying boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
+copying boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
+copying boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
+copying boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
+copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
+copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
+copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators
+copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators
+copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation
+copying serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation
+copying serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation
+copying serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector
+copying serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector
+copying serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector
+copying serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector
+copying serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector
+copying serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util
+copying serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util
+copying serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util
+copying serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util
+copying serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology
+copying serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology
+copying serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology
+copying serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology
+copying serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
+copying rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
+copying rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
+copying rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
+copying rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons
+copying rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons
+copying rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons
+copying rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons
+copying rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons
+copying rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons
+copying rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons
+copying rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors
+copying rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors
+copying rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core
+copying rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core
+copying rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/phil
+copying rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/phil
+copying rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/phil
+copying rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/phil
+copying rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/phil
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx
+copying rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx
+copying rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx
+copying rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx
+copying rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry
+copying rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry
+copying rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry
+copying rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing
+copying rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing
+copying rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing
+copying rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing
+copying rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+copying rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+copying rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+copying rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+copying rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+copying rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+copying rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+copying rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+copying rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+copying rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+copying rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+copying rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots
+copying rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots
+copying rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation
+copying rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation
+copying rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation
+copying rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation
+copying rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation
+copying rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction
+copying rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction
+copying rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction
+copying rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction
+copying rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support
+copying rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support
+copying rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support
+copying rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+copying rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family
+copying rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family
+copying rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+copying rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+copying rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+copying rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+copying rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+copying rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+copying rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+copying rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+copying rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+copying rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass
+copying rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass
+copying rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills
+copying rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills
+copying rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills
+copying rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills
+copying rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills
+copying rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills
+copying rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints
+copying rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints
+copying rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints
+copying rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model
+copying rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model
+copying rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model
+copying rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model
+copying rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg
+copying rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg
+copying rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg
+copying rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation
+copying xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation
+copying xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation
+copying xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api
+copying xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api
+copying xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api
+copying xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel
-copying xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel
-copying xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel
 copying xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
-copying xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel
+copying xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx
+copying xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui
+copying xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui
+copying xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
+copying xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
+copying xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
+copying xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
+copying xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
+copying xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
+copying xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
+copying xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
+copying xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
+copying xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
+copying xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
+copying xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
+copying xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 copying xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-copying xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx
-copying xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
-copying xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
-copying xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
-copying xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
-copying xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
-copying xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api
-copying xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api
-copying xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api
-copying xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo
-copying xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation
-copying xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation
-copying xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation
-copying xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
-copying xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
-copying xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
-copying xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
-copying xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
-copying xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
-copying xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui
-copying xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui
-copying xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
-copying xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
-copying xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
-copying xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
-copying xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
-copying xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
-copying xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
-copying xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
-copying xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology
+copying xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
+copying xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell
 copying xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell
 copying xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell
-copying xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell
 copying xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell
 copying xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell
+copying xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+copying xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
+copying xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
+copying xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
+copying xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
+copying xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
+copying xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal
+copying xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal
+copying xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos
+copying xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos
+copying xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos
+copying xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
 copying xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
 copying xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
 copying xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
 copying xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
 copying xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
 copying xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-copying xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
-copying xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
-copying xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
-copying xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
-copying xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
-copying xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
-copying xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging
+copying xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+copying xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo
+copying xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
-copying xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
 copying xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
 copying xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
-copying xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
+copying xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
 copying xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
 copying xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
+copying xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
+copying xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
+copying xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
+copying xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
+copying xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
+copying xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale
+copying xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector
 copying xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector
 copying xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector
 copying xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-copying xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
-copying xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
-copying xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
-copying xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
-copying xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
-copying xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
-copying xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-copying xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
-copying xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
 copying xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
-copying xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
-copying xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
-copying xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
-copying xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
 copying xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
-copying xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
+copying xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
+copying xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
+copying xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
 copying xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
 copying xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
-copying xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
+copying xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
 copying xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
+copying xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
 copying xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
+copying xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+copying xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
+copying xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs
 copying xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs
 copying xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale
-copying xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-copying xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-copying xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-copying xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-copying xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-copying xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-copying xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-copying xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-copying xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line
-copying xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line
-copying xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-copying xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
-copying xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
-copying xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
-copying xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
-copying xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
-copying xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
-copying xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
-copying xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
-copying xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
-copying xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
-copying xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
-copying xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
-copying xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
-copying xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line
-copying xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line
-copying xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line
 copying xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line
+copying xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line
+copying xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report
+copying xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms
 copying xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model
-copying xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database
+copying xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database
 copying xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database
 copying xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database
-copying xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database
 copying xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database
 copying xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report
-copying xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
-copying xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
+copying xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
+copying xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
+copying xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
+copying xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
+copying xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model
+copying xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs
+copying xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables
+copying xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine
+copying xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+copying xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics
+copying xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine
+copying xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine
+copying xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine
+copying xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine
+copying xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate
+copying xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate
+copying xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate
+copying xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge
+copying xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge
+copying xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge
+copying xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil
+copying xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil
+copying xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input
 copying xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input
-copying xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input
-copying xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input
 copying xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input
+copying xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input
+copying xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input
 copying xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate
-copying xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate
-copying xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate
-copying xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils
-copying xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils
-copying xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils
 copying xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils
+copying xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils
+copying xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor
+copying xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor
+copying xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor
+copying xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference
-copying xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference
 copying xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference
 copying xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference
+copying xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance
+copying xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance
+copying xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance
+copying xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors
+copying xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors
+copying xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors
+copying xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors
+copying xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors
+copying xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors
+copying xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata
-copying xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata
 copying xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata
+copying xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata
 copying xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
+copying xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation
 copying xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation
 copying xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output
+copying xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output
+copying xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter
+copying xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter
+copying xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter
+copying xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter
+copying xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter
+copying xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus
+copying xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus
+copying xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus
+copying xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model
+copying xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model
+copying xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model
+copying xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model
+copying xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group
 copying xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group
-copying xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group
 copying xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group
+copying xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale
 copying xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale
-copying xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale
 copying xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale
+copying xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
+copying xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
+copying xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
+copying xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
 copying xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
+copying xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
 copying xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
-copying xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
-copying xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
 copying xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
 copying xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
-copying xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
-copying xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
-copying xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil
-copying xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil
-copying xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil
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-copying scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-copying scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python
-copying scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-copying scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-copying scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington
-copying scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington
-copying scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
-copying scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
+copying xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
+copying xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
+copying xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
+copying xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
+copying xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
+copying xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+copying xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+copying xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+copying xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+copying xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+copying xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+copying xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+copying xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+copying xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
+copying xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
+copying xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
+copying xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
+copying xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line
+copying xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line
+copying xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+copying xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
+copying xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
+copying xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
+copying xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
+copying xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+copying xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+copying libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+copying libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
+copying libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
 copying libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
 copying libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
 copying libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
 copying libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
 copying libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
 copying libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
 copying libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-copying libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
-copying libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
-copying libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
-copying libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
-copying libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
-copying libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
-copying libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
-copying libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
+copying libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
+copying libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
+copying libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
 copying libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-copying libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-copying libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-copying libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
-copying libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
-copying libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
 copying libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
-copying libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
+copying libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
 copying libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
+copying libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
 copying libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
 copying libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
-copying libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
-copying libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
-copying libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
-copying libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
+copying libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
+copying libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
+copying libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
+copying libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
+copying libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
+copying libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
+copying libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx
 copying libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx
-copying libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx
 copying libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx
+copying libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx
 copying libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils
-copying libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils
 copying libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils
+copying libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
+copying libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
+copying libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
+copying libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
+copying libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils
-copying libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils
 copying libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils
 copying libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils
+copying libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
 copying libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
-copying libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
 copying libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
-copying libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
+copying libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
 copying libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
-copying libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
 copying libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
-copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
-copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
-copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators
-copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators
-copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports
-copying wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports
-copying wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports
-copying wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports
+copying libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
+copying libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots
+copying wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots
+copying wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots
+copying wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-copying wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-copying wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-copying wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-copying wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
+copying wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
 copying wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-copying wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-copying wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-copying wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
+copying wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
 copying wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
 copying wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
+copying wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
+copying wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
+copying wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
+copying wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
+copying wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
 copying wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-copying wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots
-copying wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots
-copying wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots
-copying wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots
+copying wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
 copying wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-copying wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft
-copying cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft
-copying cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft
+copying wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+copying wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports
+copying wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports
+copying wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports
+copying wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface
+copying scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface
+copying scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx
+copying scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+copying scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python
+copying scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx
+copying scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx
+copying scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx
+copying scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils
+copying scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils
+copying scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl
+copying scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl
+copying scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl
+copying scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl
+copying scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl
+copying scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl
+copying scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl
+copying scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib
+copying scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg
+copying scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg
+copying scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg
+copying scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg
+copying scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg
+copying scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner
+copying scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner
+copying scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse
+copying scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/farey.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/spe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+copying scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs
+copying scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs
+copying scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs
+copying scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs
+copying scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs
+copying scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs
+copying scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree
+copying scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree
+copying scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/random
+copying scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/random
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+copying scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators
+copying scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators
+copying scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators
+copying scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators
+copying scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family
+copying scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family
+copying scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family
+copying scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body
+copying scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body
+copying scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+copying scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix
+copying scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix
+copying scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+copying scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests
+copying scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests
+copying scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests
+copying scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python
+copying scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+copying scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+copying scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+copying scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+copying scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington
+copying scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington
+copying scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers
+copying qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers
+copying qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio
+copying smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio
+copying smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/stl
+copying smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/stl
+copying smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/stl
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
+copying smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
+copying smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
+copying smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
+copying smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
+copying smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
+copying smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure
+copying smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/masks
+copying smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/masks
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors
+copying smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators
+copying smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators
+copying smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family
+copying smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression
+copying smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression
+copying smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression
+copying smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement
+copying smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement
+copying smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement
+copying smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests
+copying smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests
+copying smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests
+copying smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct
+copying smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data
+copying smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
+copying smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
+copying smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
+copying smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
+copying smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
+copying smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
+copying smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
+copying smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints
+copying smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints
+copying smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints
+copying smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+copying smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical
+copying smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical
+copying smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical
+copying smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering
-copying cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering
 copying cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering
+copying cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math
 copying cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft
+copying cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft
+copying cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions
-copying cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions
 copying cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-copying rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
-copying rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
-copying rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
-copying rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
-copying rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry
-copying rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry
-copying rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry
-copying rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
-copying rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
-copying rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
-copying rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
-copying rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
-copying rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage
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-copying iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
-copying iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
-copying iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
-copying iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
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-copying iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve
-copying iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve
-copying iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve
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-copying iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek
-copying iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek
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-copying iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map
-copying iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map
-copying iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map
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-copying iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint
-copying iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
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-copying iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-copying iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-copying iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
-copying iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
-copying iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
-copying iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
-copying iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
+copying cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line
+copying cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line
+copying cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
-copying iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
-copying iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
+copying iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
 copying iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
-copying iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
+copying iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
 copying iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
 copying iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
-copying iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
-copying iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
-copying iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
 copying iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
+copying iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
+copying iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
+copying iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
+copying iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
+copying iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
+copying iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
+copying iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
+copying iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
+copying iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
+copying iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-copying iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
 copying iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
-copying iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
-copying iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
-copying iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
-copying iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
-copying iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
-copying iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
-copying iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
-copying iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
-copying iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
-copying iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
-copying iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
-copying iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof
-copying iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof
-copying iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof
-copying iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof
+copying iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+copying iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
+copying iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
+copying iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
+copying iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
+copying iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
+copying iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber
 copying iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber
-copying iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber
 copying iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-copying iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-copying iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-copying iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6
-copying iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6
-copying iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
-copying iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
-copying iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
-copying iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
-copying iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
-copying iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
-copying iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile
-copying iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile
-copying iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map
+copying iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map
+copying iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map
+copying iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+copying iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+copying iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+copying iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+copying iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+copying iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve
+copying iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve
+copying iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve
+copying iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile
+copying iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile
+copying iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs
+copying iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6
+copying iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6
+copying iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
+copying iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
+copying iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
+copying iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
+copying iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
+copying iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
+copying iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
+copying iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek
+copying iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek
+copying iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek
+copying iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek
+copying iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
+copying iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
+copying iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
+copying iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
+copying iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
+copying iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint
+copying iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint
+copying iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+copying iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
 copying iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-copying iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-copying iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-copying iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs
-copying iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs
+copying iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+copying iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+copying iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof
+copying iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof
+copying iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof
+copying iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
+copying iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util
-copying iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util
 copying iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util
+copying iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
 copying iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
+copying iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
 copying iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
-copying iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
-copying iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
 copying iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
-copying iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
+copying iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
+copying iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation
+copying iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation
+copying iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation
+copying iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
-copying iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
 copying iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
-copying iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
-copying iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
+copying iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
 copying iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
-copying iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
 copying iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
+copying iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
 copying iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
-copying iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
 copying iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
+copying iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
+copying iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
 copying iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
-copying iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation
-copying iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation
-copying iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation
-copying iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster
-copying prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster
-copying prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster
+copying iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
+copying iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu
+copying simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu
+copying simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu
+copying simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu
+copying simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos
+copying simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos
+copying simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+copying simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+copying simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel
+copying simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling
+copying simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling
+copying simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling
+copying simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling
+copying simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners
+copying simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners
+copying simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners
+copying simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners
+copying simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners
+copying simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems
+copying simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems
+copying simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems
+copying simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems
+copying simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems
+copying simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems
+copying simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs
+copying crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs
+copying crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx
+copying crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx
+copying crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx
+copying crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview
+copying crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview
+copying crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview
+copying crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview
+copying crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview
+copying crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+copying crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+copying crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+copying crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+copying crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+copying crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+copying crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+copying crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+copying crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+copying crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+copying crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src
+copying crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src
+copying crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+copying prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
+copying prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
+copying prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
+copying prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
+copying prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
 copying prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
 copying prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
 copying prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
 copying prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
 copying prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
 copying prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
 copying prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
 copying prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-copying prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
-copying prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
-copying prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
-copying prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
-copying prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-copying prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-copying cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
-copying cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+copying prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster
+copying prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster
+copying prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line
+copying cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line
+copying cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+copying cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support
+copying spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support
+copying spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+copying spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox
+copying spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox
+copying spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
+copying spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
+copying spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
+copying spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
+copying spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
+copying spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
+copying spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
+copying spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox
+copying spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox
+copying spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction
+copying spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction
+copying spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction
+copying spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
+copying spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
+copying spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
+copying spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
+copying spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
+copying spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
+copying spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family
+copying spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family
+copying spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel
+copying spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel
+copying spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel
+copying spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel
+copying spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx
+copying spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx
+copying spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx
+copying spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx
+copying spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx
+copying spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias
+copying mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias
+copying mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+copying mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+copying mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components
+copying mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components
+copying mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components
+copying mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+copying mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
+copying mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
+copying mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
+copying mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
+copying mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
+copying mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+copying mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb
+copying mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb
+copying mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb
+copying mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics
+copying mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics
+copying mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics
+copying mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics
+copying mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics
+copying mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics
+copying mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics
+copying mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
+copying mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
+copying mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
+copying mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
+copying mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
+copying mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
+copying mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
+copying mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+copying mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
+copying mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
+copying mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
+copying mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
+copying mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
+copying mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
+copying mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
+copying mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
+copying mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
+copying mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
+copying mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
+copying mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
+copying mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
+copying mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
+copying mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
+copying mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon
+copying mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon
+copying mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon
+copying mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon
+copying mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon
+copying mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+copying mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+copying mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+copying mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+copying mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+copying mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+copying mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+copying mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+copying mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+copying mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+copying mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+copying mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+copying mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+copying mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+copying mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+copying mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+copying mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+copying mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+copying mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment
+copying mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning
+copying mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning
+copying mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning
+copying mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+copying mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+copying mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+copying mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+copying mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+copying mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
+copying mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
+copying mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
+copying mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
+copying mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
+copying mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification
+copying mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification
+copying mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+copying mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+copying mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+copying mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks
+copying mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks
+copying mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks
+copying mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+copying mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+copying mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+copying mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+copying mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+copying mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+copying mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+copying mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+copying mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+copying mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa
+copying mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce
+copying mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce
+copying mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce
+copying mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce
+copying mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce
+copying mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr
+copying mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr
+copying mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
+copying mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
+copying mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
+copying mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
+copying mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder
+copying mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder
+copying mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder
+copying mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder
+copying mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder
+copying mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder
+copying mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model
+copying mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model
+copying mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model
+copying mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model
+copying mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model
+copying mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+copying mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors
+copying mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors
+copying mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+copying mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/den
+copying mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/den
+copying mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/den
+copying mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/den
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model
+copying mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model
+copying mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model
+copying mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space
+copying mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space
+copying mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe
+copying mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe
+copying mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe
+copying mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe
+copying mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe
+copying mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+copying mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm
+copying mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm
+copying mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm
+copying mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm
+copying mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm
+copying mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands
+copying mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands
+copying mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands
+copying mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure
+copying mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure
+copying mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure
+copying mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure
+copying mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure
+copying mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure
+copying mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build
+copying mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build
+copying mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build
+copying mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build
+copying mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build
+copying mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build
+copying mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build
+copying mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+copying mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+copying mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+copying mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+copying mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+copying mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+copying mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+copying mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran
+copying mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran
+copying mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity
+copying mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity
+copying mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity
+copying mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity
+copying mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity
+copying mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity
+copying mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity
+copying mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize
+copying mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize
+copying mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize
+copying mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize
+copying mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize
+copying mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize
+copying mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize
+copying mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+copying mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+copying mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement
+copying mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement
+copying mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement
+copying mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
+copying mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space
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+copying gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line
+copying gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
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+copying cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
-copying cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
-copying cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
 copying cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
+copying cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
+copying cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
+copying cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
 copying cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
+copying cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
+copying cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
+copying cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
 copying cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
 copying cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
-copying cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
 copying cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
-copying cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
-copying cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
 copying cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
-copying cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/masks
-copying cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/masks
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
+copying cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
+copying cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
+copying cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
+copying cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller
+copying cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller
 copying cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller
 copying cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller
-copying cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller
-copying cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller
 copying cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
-copying cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx
+copying cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging
+copying cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging
+copying cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry
+copying cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
 copying cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-copying cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
 copying cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
 copying cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
 copying cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
 copying cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-copying cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry
-copying cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-copying cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
-copying cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
-copying cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
-copying cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
-copying cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints
+copying cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+copying cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance
+copying cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron
+copying cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol
+copying cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol
+copying cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+copying cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/masks
+copying cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/masks
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
-copying cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
+copying cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
 copying cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
-copying cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
 copying cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
-copying cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
 copying cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
-copying cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
+copying cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
+copying cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
 copying cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol
-copying cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol
-copying cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance
-copying cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance
+copying cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
-copying cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
+copying cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
 copying cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
-copying cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
 copying cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
-copying cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron
-copying cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron
+copying cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
+copying cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators
+copying cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators
+copying cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family
-copying cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family
 copying cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family
+copying cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+copying cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+copying cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
+copying cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
 copying cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-copying cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-copying cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging
-copying cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging
-copying cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-copying cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators
-copying cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators
-copying cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
-copying cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
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-copying cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints
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-copying cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
-copying cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
-copying cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
-copying cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
-copying cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
-copying cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto
-copying cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto
-copying cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto
-copying cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto
+copying cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+copying cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+copying cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+copying cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+copying cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering
+copying cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
 copying cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
 copying cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
 copying cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
 copying cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-copying cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering
-copying cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr
-copying cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr
-copying cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
-copying cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
-copying cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
-copying cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
-copying cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
-copying cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
-copying cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
-copying cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
-copying cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
-copying cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
-copying cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
+copying cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+copying cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations
+copying cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations
+copying cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
+copying cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
+copying cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
 copying cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-copying cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
 copying cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-copying cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-copying cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
+copying cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
+copying cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
 copying cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
 copying cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-copying cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-copying cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-copying cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-copying cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-copying cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
+copying cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
 copying cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations
-copying cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations
-copying cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations
+copying cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
+copying cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
+copying cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
+copying cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
+copying cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
+copying cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
+copying cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell
 copying cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
-copying cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
-copying cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
-copying cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
-copying cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
-copying cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx
+copying cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx
+copying cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx
+copying cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
-copying cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
 copying cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
-copying cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
-copying cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
-copying cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
-copying cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
 copying cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
-copying cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
+copying cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
 copying cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
+copying cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
 copying cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
+copying cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
+copying cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
+copying cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
+copying cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
+copying cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
+copying cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
+copying cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
+copying cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
+copying cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa
+copying cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa
+copying cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa
 copying cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa
 copying cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa
-copying cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa
-copying cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx
-copying cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx
-copying cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx
-copying cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
-copying spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
-copying spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
-copying spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
-copying spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
-copying spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
-copying spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox
-copying spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox
-copying spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
-copying spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
-copying spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
-copying spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
-copying spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
-copying spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
-copying spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
-copying spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
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-copying spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
-copying spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers
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-copying spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox
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-copying spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction
-copying spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction
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-copying spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel
-copying spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel
-copying spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel
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-copying smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement
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-copying smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/stl
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-copying smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
-copying smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
-copying smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
-copying smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
-copying smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
-copying smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line
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-copying smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio
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-copying smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators
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-copying smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints
-copying smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints
-copying smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints
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-copying smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
-copying smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
-copying smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
-copying smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
-copying smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
-copying smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints
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-copying smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-copying smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-copying smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-copying smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-copying smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-copying smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-copying smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-copying smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-copying smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical
-copying smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical
-copying smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical
-copying smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical
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-copying smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests
-copying smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests
-copying smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests
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-copying smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data
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+copying cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
+copying cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
+copying cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
+copying cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
+copying cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery
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+copying cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
+copying cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
+copying cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
+copying cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
+copying cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
+copying cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
+copying cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto
+copying cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto
+copying cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto
+copying cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr
+copying cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr
+copying cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
+copying fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
+copying fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
+copying fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
+copying fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
+copying fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
+copying fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
+copying fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+copying boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost
+copying boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost
+copying boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost
+copying boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost
+copying boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost
+copying boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost
+copying boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
+copying boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph
 # build the dxtbx python module
 dh_auto_build --sourcedirectory=dxtbx
 	pybuild --build -i python{version} -p 3.13 --dir dxtbx
@@ -6797,287 +6833,287 @@
 running build
 running build_py
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
+copying src/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
+copying src/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
+copying src/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
+copying src/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
-copying src/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
-copying src/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
-copying src/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
-copying src/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus
+copying src/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+copying src/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
+copying src/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
+copying src/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
+copying src/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
+copying src/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
+copying src/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
+copying src/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
+copying src/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util
+copying src/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util
+copying src/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util
+copying src/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data
+copying src/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 copying src/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
-copying src/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
-copying src/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
-copying src/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
-copying src/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
-copying src/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util
-copying src/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util
-copying src/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util
-copying src/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
-copying src/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
-copying src/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus
-copying src/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data
-copying src/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-copying src/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs
 copying src/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs
 copying src/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs
 copying src/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs
 copying src/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
+copying src/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
-copying src/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/py.typed -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
-copying src/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
+copying src/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 copying src/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family
 copying src/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family
 copying src/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family
 copying src/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python
-copying src/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python
 copying src/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python
+copying src/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python
 copying src/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python
+copying src/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python
 copying src/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python
-copying src/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/example
-copying src/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/example
 copying src/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/example
-copying src/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-copying src/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
-copying src/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
-copying src/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
-copying src/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
-copying src/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
+copying src/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/example
+copying src/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
 copying src/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
 copying src/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
-copying src/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python
 copying src/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python
 copying src/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data
-copying src/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 copying src/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 copying src/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 copying src/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
+copying src/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 copying src/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 copying src/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 copying src/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 copying src/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
-copying src/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
 copying src/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
 copying src/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
 copying src/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
 copying src/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
 copying src/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
 copying src/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
-copying src/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
 copying src/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python
+copying src/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+copying src/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
+copying src/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
+copying src/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
+copying src/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
+copying src/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python
 # build the cctbx extensions and libraries
-dh_auto_build -- -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 42"
-	pybuild --build -i python{version} -p 3.13 -s custom "--build-args=cd {build_dir}_ && ./bin/libtbx.scons -j 42"
-I: pybuild base:311: cd '/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build'_ && ./bin/libtbx.scons -j 42
+dh_auto_build -- -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 40"
+	pybuild --build -i python{version} -p 3.13 -s custom "--build-args=cd {build_dir}_ && ./bin/libtbx.scons -j 40"
+I: pybuild base:311: cd '/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build'_ && ./bin/libtbx.scons -j 40
 scons: Reading SConscript files ...
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/libtbx/SConscript:1414: SyntaxWarning: invalid escape sequence '\.'
   cuda_version = re.findall('release [0-9]+\.*[0-9]+', line)
@@ -7112,9 +7148,9 @@
 g++ -o cctbx/maptbx/dijkstra.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/dijkstra.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/xplor/map_reader.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/xplor/map_reader.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/xplor/map_writer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/xplor/map_writer.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/direct_space_asu/proto/cut.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/direct_space_asu/proto/cut.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/direct_space_asu/proto/reference_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/direct_space_asu/proto/reference_table.cpp
@@ -7126,110 +7162,110 @@
 g++ -o cctbx/eltbx/xray_scattering/it1992.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering/it1992.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/xray_scattering/wk1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering/wk1995.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/xray_scattering/n_gaussian_raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering/n_gaussian_raw.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/xray_scattering/n_gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering/n_gaussian.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/fp_fdp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/fp_fdp.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/henke.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/henke_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_01_12.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/henke_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_13_24.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/henke_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_25_36.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/henke_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_37_48.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/henke_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_49_60.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/henke_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_61_72.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/henke_tables_73_84.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_73_84.cpp
+g++ -o cctbx/eltbx/henke_tables_85_92.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_85_92.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/eltbx/henke_tables_85_92.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_85_92.cpp
 g++ -o cctbx/eltbx/icsd_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/icsd_radii.cpp
 g++ -o cctbx/eltbx/covalent_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/covalent_radii.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/neutron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/neutron.cpp
 g++ -o cctbx/eltbx/sasaki.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki.cpp
-g++ -o cctbx/eltbx/sasaki_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_01_12.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/eltbx/sasaki_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_01_12.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/sasaki_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_13_24.cpp
-g++ -o cctbx/eltbx/sasaki_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_25_36.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/eltbx/sasaki_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_25_36.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/sasaki_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_37_48.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/sasaki_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_49_60.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/sasaki_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_61_72.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/sasaki_tables_73_82.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_73_82.cpp
 g++ -o cctbx/eltbx/tiny_pse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/tiny_pse.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/eltbx/wavelengths.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/wavelengths.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/eltbx/electron_scattering/peng1996.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/electron_scattering/peng1996.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/eltbx/electron_scattering/peng1996.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/electron_scattering/peng1996.cpp
 g++ -o cctbx/eltbx/attenuation_coefficient.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/attenuation_coefficient.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/asu.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/bins.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/index_generator.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/miller/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/index_span.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/miller/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/index_span.cpp
 g++ -o cctbx/miller/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/match_bijvoet_mates.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/miller/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/match_indices.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/miller/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/match_indices.cpp
 g++ -o cctbx/miller/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/match_multi_indices.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/sym_equiv.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/bricks.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/bricks.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/change_of_basis_op.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/sgtbx/group_codes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/group_codes.cpp
 g++ -o cctbx/sgtbx/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/find_affine.cpp
+g++ -o cctbx/sgtbx/group_codes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/group_codes.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/sgtbx/hall_in.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/hall_in.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/sgtbx/hall_in.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/hall_in.cpp
 g++ -o cctbx/sgtbx/lattice_tr.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/lattice_tr.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/lattice_symmetry.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/miller.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/miller.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/reciprocal_space_asu.cpp
 g++ -o cctbx/sgtbx/reciprocal_space_ref_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/reciprocal_space_ref_asu.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.cpp
-g++ -o cctbx/sgtbx/rot_mx_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx_info.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/sgtbx/row_echelon_solve.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/row_echelon_solve.cpp
+g++ -o cctbx/sgtbx/rot_mx_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx_info.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/sgtbx/row_echelon_solve.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/row_echelon_solve.cpp
 g++ -o cctbx/sgtbx/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/select_generators.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/seminvariant.cpp
-g++ -o cctbx/sgtbx/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/sgtbx/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
@@ -7253,28 +7289,25 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/sgtbx/reference_settings/normalizer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/reference_settings/normalizer.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/libiotbx_xplor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_xplor.so.0 iotbx/xplor/map_reader.o iotbx/xplor/map_writer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
 g++ -o cctbx/sgtbx/reference_settings/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/reference_settings/wyckoff.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/uctbx/uctbx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx/uctbx.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/libiotbx_xplor.so.0.0.1'
+    'lib/libiotbx_xplor.so.0'->'lib/libiotbx_xplor.so.0.0.1'
+    'lib/libiotbx_xplor.so'->'lib/libiotbx_xplor.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/uctbx/spoil_optimization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx/spoil_optimization.cpp
 g++ -o cctbx/uctbx/crystal_orientation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx/crystal_orientation.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o omptbx/stubs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/omptbx/stubs.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/libiotbx_xplor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_xplor.so.0 iotbx/xplor/map_reader.o iotbx/xplor/map_writer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
-Create symlinks for: 'lib/libiotbx_xplor.so.0.0.1'
-    'lib/libiotbx_xplor.so.0'->'lib/libiotbx_xplor.so.0.0.1'
-    'lib/libiotbx_xplor.so'->'lib/libiotbx_xplor.so.0.0.1'
 g++ -o boost_adaptbx/graph/breadth_first_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/libomptbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libomptbx.so.0 omptbx/stubs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-Create symlinks for: 'lib/libomptbx.so.0.0.1'
-    'lib/libomptbx.so.0'->'lib/libomptbx.so.0.0.1'
-    'lib/libomptbx.so'->'lib/libomptbx.so.0.0.1'
 g++ -o boost_adaptbx/graph/clustering_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/libomptbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libomptbx.so.0 omptbx/stubs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 g++ -o boost_adaptbx/graph/connected_component_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o boost_adaptbx/graph/graph_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_ext.cpp
@@ -7285,6 +7318,9 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o boost_adaptbx/graph/metric_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/metric_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/libomptbx.so.0.0.1'
+    'lib/libomptbx.so.0'->'lib/libomptbx.so.0.0.1'
+    'lib/libomptbx.so'->'lib/libomptbx.so.0.0.1'
 g++ -o boost_adaptbx/graph/min_cut_max_flow_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o boost_adaptbx/graph/utility_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/utility_ext.cpp
@@ -7296,33 +7332,33 @@
 g++ -o boost_adaptbx/optional_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/optional_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o boost_adaptbx/rational_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/rational_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o boost_adaptbx/std_pair_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/std_pair_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o boost_adaptbx/tests/boost_thread_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/tests/boost_thread_test.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o boost_adaptbx/tests/python_streambuf_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/tests/python_streambuf_test_ext.cpp
 g++ -o boost_adaptbx/tests/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/tests/tst_optional_copy.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o boost_adaptbx/tuple_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/tuple_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DSWIG_PYTHON_STRICT_BYTE_CHAR -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/boost_python/cbflib_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DSWIG_PYTHON_STRICT_BYTE_CHAR -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/boost_python/cbflib_ext.cpp
 g++ -o cbflib_adaptbx/detectors/buffer_based_service.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/buffer_based_service.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cbflib_adaptbx/detectors/cbf_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/cbf_adaptor.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cbflib_adaptbx/detectors/cbf_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/cbf_adaptor.cpp
 g++ -o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/cbf_byte_offset_optimized.cpp
 g++ -o cbflib_adaptbx/detectors/mar_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/mar_adaptor.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cbflib_adaptbx/detectors/tst_memory.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DCBF_NO_REGEX -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/tst_memory.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cbflib_adaptbx/detectors/tst_memory.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DCBF_NO_REGEX -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx/detectors/tst_memory.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o ccp4io_adaptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ccp4io -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ccp4io_adaptbx/ext.cpp
+gcc -o ccp4io_adaptbx/fortran_call_stubs.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ccp4io_adaptbx/fortran_call_stubs.c
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 gcc -o ccp4io_adaptbx/printf_wrappers.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ccp4io_adaptbx/printf_wrappers.c
-gcc -o ccp4io_adaptbx/fortran_call_stubs.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ccp4io_adaptbx/fortran_call_stubs.c
 g++ -o cctbx/adp_restraints/adp_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/adp_restraints/adp_restraints_bpl.cpp
 g++ -o cctbx/adp_restraints/adp_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/adp_restraints/adp_restraints_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
@@ -7334,12 +7370,13 @@
 g++ -o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/adp_restraints/fixed_u_eq_adp_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/adp_restraints/isotropic_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/adp_restraints/isotropic_adp_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/adp_restraints/rigid_bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/adp_restraints/rigid_bond_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/adp_restraints/rigu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/adp_restraints/rigu_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/adptbx/boost_python/adptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/adptbx/boost_python/adptbx_ext.cpp
+g++ -o boost_adaptbx/tests/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread boost_adaptbx/tests/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/adptbx/boost_python/anharmonic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/adptbx/boost_python/anharmonic_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
@@ -7347,7 +7384,6 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/array_family/boost_python/flex_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o boost_adaptbx/tests/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread boost_adaptbx/tests/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 g++ -o cctbx/array_family/boost_python/flex_hendrickson_lattman.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/array_family/boost_python/flex_hendrickson_lattman.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/array_family/boost_python/flex_miller_index.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/array_family/boost_python/flex_miller_index.cpp
@@ -7362,14 +7398,14 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/boost_python/statistics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/boost_python/statistics_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/covariance/boost_python/covariance_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/covariance/boost_python/covariance_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/libcctbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcctbx.so.0 cctbx/eltbx/basic.o cctbx/eltbx/xray_scattering/it1992.o cctbx/eltbx/xray_scattering/wk1995.o cctbx/eltbx/xray_scattering/n_gaussian_raw.o cctbx/eltbx/xray_scattering/n_gaussian.o cctbx/eltbx/fp_fdp.o cctbx/eltbx/henke.o cctbx/eltbx/henke_tables_01_12.o cctbx/eltbx/henke_tables_13_24.o cctbx/eltbx/henke_tables_25_36.o cctbx/eltbx/henke_tables_37_48.o cctbx/eltbx/henke_tables_49_60.o cctbx/eltbx/henke_tables_61_72.o cctbx/eltbx/henke_tables_73_84.o cctbx/eltbx/henke_tables_85_92.o cctbx/eltbx/icsd_radii.o cctbx/eltbx/covalent_radii.o cctbx/eltbx/neutron.o cctbx/eltbx/sasaki.o cctbx/eltbx/sasaki_tables_01_12.o cctbx/eltbx/sasaki_tables_13_24.o cctbx/eltbx/sasaki_tables_25_36.o cctbx/eltbx/sasaki_tables_37_48.o cctbx/eltbx/sasaki_tables_49_60.o cctbx/eltbx/sasaki_tables_61_72.o cctbx/eltbx/sasaki_tables_73_82.o cctbx/eltbx/tiny_pse.o cctbx/eltbx/wavelengths.o cctbx/eltbx/electron_scattering/peng1996.o cctbx/eltbx/attenuation_coefficient.o cctbx/miller/asu.o cctbx/miller/bins.o cctbx/miller/index_generator.o cctbx/miller/index_span.o cctbx/miller/match_bijvoet_mates.o cctbx/miller/match_indices.o cctbx/miller/match_multi_indices.o cctbx/miller/sym_equiv.o cctbx/sgtbx/bricks.o cctbx/sgtbx/change_of_basis_op.o cctbx/sgtbx/find_affine.o cctbx/sgtbx/group_codes.o cctbx/sgtbx/hall_in.o cctbx/sgtbx/lattice_tr.o cctbx/sgtbx/lattice_symmetry.o cctbx/sgtbx/miller.o cctbx/sgtbx/reciprocal_space_asu.o cctbx/sgtbx/reciprocal_space_ref_asu.o cctbx/sgtbx/rot_mx.o cctbx/sgtbx/rot_mx_info.o cctbx/sgtbx/row_echelon_solve.o cctbx/sgtbx/rt_mx.o cctbx/sgtbx/select_generators.o cctbx/sgtbx/seminvariant.o cctbx/sgtbx/site_symmetry.o cctbx/sgtbx/space_group.o cctbx/sgtbx/space_group_type.o cctbx/sgtbx/symbols.o cctbx/sgtbx/tensor_rank_2.o cctbx/sgtbx/tr_group.o cctbx/sgtbx/tr_vec.o cctbx/sgtbx/utils.o cctbx/sgtbx/wyckoff.o cctbx/sgtbx/reference_settings/hall_symbol_table.o cctbx/sgtbx/reference_settings/matrix_group_code_table.o cctbx/sgtbx/reference_settings/normalizer.o cctbx/sgtbx/reference_settings/wyckoff.o cctbx/uctbx/uctbx.o cctbx/uctbx/spoil_optimization.o cctbx/uctbx/crystal_orientation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
-g++ -o cctbx/crystal/asu_clusters_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/asu_clusters_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/libcctbx.so.0.0.1'
     'lib/libcctbx.so.0'->'lib/libcctbx.so.0.0.1'
     'lib/libcctbx.so'->'lib/libcctbx.so.0.0.1'
+g++ -o cctbx/covariance/boost_python/covariance_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/covariance/boost_python/covariance_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/crystal/asu_clusters_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/asu_clusters_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/crystal/close_packing_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/close_packing_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/crystal/coordination_sequences_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/coordination_sequences_bpl.cpp
@@ -7380,8 +7416,6 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/crystal/incremental_pairs_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/incremental_pairs_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/crystal/neighbors_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/neighbors_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9,
                  from /usr/include/boost/function/detail/prologue.hpp:12,
                  from /usr/include/boost/function/function_template.hpp:13,
@@ -7395,14 +7429,10 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object.hpp:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_type.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp:1:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
-g++ -o cctbx/crystal/pair_tables_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/pair_tables_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/crystal/site_cluster_analysis_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/site_cluster_analysis_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9,
                  from /usr/include/boost/function/detail/prologue.hpp:12,
                  from /usr/include/boost/function/function_template.hpp:13,
@@ -7416,7 +7446,7 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object.hpp:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_type.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_ext.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp:1:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
@@ -7433,7 +7463,7 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object.hpp:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_type.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp:1:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
@@ -7450,7 +7480,7 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object.hpp:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_type.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp:1:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
@@ -7467,7 +7497,7 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object.hpp:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_type.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/metric_ext.cpp:1:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
@@ -7484,7 +7514,7 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object.hpp:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_type.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/utility_ext.cpp:1:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
@@ -7501,7 +7531,7 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object.hpp:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_type.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/metric_ext.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_ext.cpp:1:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
@@ -7518,7 +7548,7 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object.hpp:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/graph_type.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/utility_ext.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp:1:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
@@ -7539,6 +7569,12 @@
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
+g++ -o cctbx/crystal/neighbors_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/neighbors_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/crystal/pair_tables_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/pair_tables_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/crystal/site_cluster_analysis_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/site_cluster_analysis_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/crystal/symmetry_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/symmetry_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/dmtbx/boost_python/dmtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/dmtbx/boost_python/dmtbx_ext.cpp
@@ -7572,8 +7608,8 @@
 g++ -o cctbx/examples/convert_ccp4_symop_lib.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples/convert_ccp4_symop_lib.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/examples/find_distances.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples/find_distances.cpp
-g++ -o cctbx/examples/getting_started.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples/getting_started.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/examples/getting_started.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples/getting_started.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/examples/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/examples/lattice_symmetry.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
@@ -7611,30 +7647,6 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/maptbx/bcr/bcr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/bcr/bcr_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/coordinate_transformers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/coordinate_transformers.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/grid_indices_around_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/grid_indices_around_sites.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/grid_tags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/grid_tags.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/gridding.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/gridding.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/maptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/maptbx_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/misc.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/misc.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/peak_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/peak_search.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/pymol_interface.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/pymol_interface.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/statistics.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/maptbx/boost_python/structure_factors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/structure_factors.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/masks/boost_python/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/masks/boost_python/masks_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/math/boost_python/math_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/restraints.h:6,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/angle.h:6,
@@ -7643,6 +7655,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
+g++ -o cctbx/maptbx/boost_python/coordinate_transformers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/coordinate_transformers.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -7664,16 +7678,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-g++ -o cctbx/math/time_trigonometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/math/time_trigonometry.cpp
+g++ -o cctbx/maptbx/boost_python/grid_indices_around_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/grid_indices_around_sites.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/restraints.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/chirality.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:13:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -7707,64 +7713,22 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+g++ -o cctbx/maptbx/boost_python/grid_tags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/grid_tags.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/maptbx/boost_python/gridding.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/gridding.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/maptbx/boost_python/maptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/maptbx_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/maptbx/boost_python/misc.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/misc.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/restraints.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:12:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_sorted.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp:9:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/restraints.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:12:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/chirality.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:13:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h: In constructor ‘cctbx::geometry_restraints::bond_similarity::bond_similarity(const scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h:84:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::af::tiny<long unsigned int, 2> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   84 |         for(int i=0;i<proxy.i_seqs.size();i++) {
-      |                     ~^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h: In constructor ‘cctbx::geometry_restraints::bond_similarity::bond_similarity(const cctbx::uctbx::unit_cell&, const scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h:108:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::af::tiny<long unsigned int, 2> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  108 |         for(int i=0;i<proxy.i_seqs.size();i++) {
-      |                     ~^~~~~~~~~~~~~~~~~~~~
-g++ -o cctbx/merging/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/merging/ext.cpp
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
-  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
-  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -7786,6 +7750,14 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/restraints.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:12:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -7823,12 +7795,48 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:11:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_misc.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:14:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h: In constructor ‘cctbx::geometry_restraints::bond_similarity::bond_similarity(const scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h:84:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::af::tiny<long unsigned int, 2> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   84 |         for(int i=0;i<proxy.i_seqs.size();i++) {
+      |                     ~^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h: In constructor ‘cctbx::geometry_restraints::bond_similarity::bond_similarity(const cctbx::uctbx::unit_cell&, const scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_similarity.h:108:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::af::tiny<long unsigned int, 2> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  108 |         for(int i=0;i<proxy.i_seqs.size();i++) {
+      |                     ~^~~~~~~~~~~~~~~~~~~~
+g++ -o cctbx/maptbx/boost_python/peak_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/peak_search.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/maptbx/boost_python/pymol_interface.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/pymol_interface.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/maptbx/boost_python/statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/statistics.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
+  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
+  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -7887,35 +7895,16 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:13:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/proxy_select.h: In instantiation of ‘scitbx::af::shared<ElementType> cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref<ElementType>&, const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&) [with ProxyType = dihedral_proxy]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:110:17:   required from here
-  110 |                 shared_proxy_remove, (
-      |                 ^~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<unsigned int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  187 |       if (match_ctr != i_seqs.size()) {
-      |           ~~~~~~~~~~^~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
-  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
-  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:11:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -7948,12 +7937,12 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:11:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::dihedral_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::dihedral_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:11:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::parallelity_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::parallelity_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::dihedral_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::parallelity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; std::string = std::__cxx11::basic_string<char>]’
   130 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   131 |         w_t,
@@ -7962,14 +7951,22 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   133 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:84:65:   required from here
-   84 |         scitbx::af::boost_python::shared_wrapper<w_t, rir>::wrap(
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
-   85 |           "shared_dihedral_proxy")
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~                               
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:82:60:   required from here
+   82 |         scitbx::af::boost_python::shared_wrapper<w_t>::wrap(
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
+   83 |           "shared_parallelity_proxy")
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~                       
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/restraints.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:12:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -7991,34 +7988,60 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_misc.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:14:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-g++ -o cctbx/math/time_trigonometry -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/math/time_trigonometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_timer -lm
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h: In instantiation of ‘int cctbx::crystal::direct_space_asu::asu_mappings<FloatType, IntShiftType>::find_i_sym(unsigned int, const cctbx::sgtbx::rt_mx&) const [with FloatType = double; IntShiftType = int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/pair_tables.h:643:46:   required from ‘bool cctbx::crystal::pair_asu_table<FloatType, IntShiftType>::process_pair(unsigned int, unsigned int, const cctbx::sgtbx::rt_mx&) [with FloatType = double; IntShiftType = int]’
-  643 |         int j_sym = asu_mappings_->find_i_sym(j_seq, rt_mx_j);
-      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/pair_tables.h:543:35:   required from ‘cctbx::crystal::pair_asu_table<FloatType, IntShiftType>& cctbx::crystal::pair_asu_table<FloatType, IntShiftType>::add_pair(const scitbx::af::tiny<unsigned int, 2>&) [with FloatType = double; IntShiftType = int]’
-  543 |         bool is_new = process_pair(i_seqs[0], i_seqs[1], rt_mx_ji);
-      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_sorted.h:16:30:   required from here
-   16 |       pair_asu_table.add_pair(bond_simple_proxies[i].i_seqs);
-      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:859:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<cctbx::crystal::direct_space_asu::asu_mapping<double, int>, std::allocator<cctbx::crystal::direct_space_asu::asu_mapping<double, int> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  859 |           for(int i_sym=0; i_sym<mappings_const_ref_[i_seq].size(); i_sym++) {
-      |                            ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:869:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<cctbx::crystal::direct_space_asu::asu_mapping<double, int>, std::allocator<cctbx::crystal::direct_space_asu::asu_mapping<double, int> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  869 |           for(int i_sym=0; i_sym<mappings_const_ref_[i_seq].size(); i_sym++) {
-      |                            ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/cassert:44,
+                 from /usr/include/boost/move/detail/type_traits.hpp:33,
+                 from /usr/include/boost/move/traits.hpp:31,
+                 from /usr/include/boost/move/utility.hpp:30,
+                 from /usr/include/boost/optional/optional.hpp:59,
+                 from /usr/include/boost/optional.hpp:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:10:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::map<unsigned int, cctbx::geometry_restraints::bond_params> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::map<unsigned int, cctbx::geometry_restraints::bond_params> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = std::map<unsigned int, cctbx::geometry_restraints::bond_params>; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  131 |         w_t,
+      |         ~~~~                                        
+  132 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  133 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:129:23:   required from here
+  129 |       shared_w_t::wrap(
+      |       ~~~~~~~~~~~~~~~~^
+  130 |         "bond_params_table")
+      |         ~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::bond_simple_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::bond_simple_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  131 |         w_t,
+      |         ~~~~                                        
+  132 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  133 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:232:25:   required from here
+  232 |         shared_w_t::wrap(
+      |         ~~~~~~~~~~~~~~~~^
+  233 |           "shared_bond_simple_proxy")
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -8071,25 +8094,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o cctbx/miller/boost_python/amplitude_normalisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/amplitude_normalisation.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /usr/include/c++/14/cassert:44,
-                 from /usr/include/boost/move/detail/type_traits.hpp:33,
-                 from /usr/include/boost/move/traits.hpp:31,
-                 from /usr/include/boost/move/utility.hpp:30,
-                 from /usr/include/boost/optional/optional.hpp:59,
-                 from /usr/include/boost/optional.hpp:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:11:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::parallelity_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::parallelity_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+g++ -o cctbx/maptbx/boost_python/structure_factors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/maptbx/boost_python/structure_factors.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::bond_asu_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::bond_asu_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::parallelity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
   130 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   131 |         w_t,
@@ -8098,14 +8108,36 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   133 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:82:60:   required from here
-   82 |         scitbx::af::boost_python::shared_wrapper<w_t>::wrap(
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
-   83 |           "shared_parallelity_proxy")
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~                       
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:340:25:   required from here
+  340 |         shared_w_t::wrap(
+      |         ~~~~~~~~~~~~~~~~^
+  341 |           "shared_bond_asu_proxy")
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:13:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/proxy_select.h: In instantiation of ‘scitbx::af::shared<ElementType> cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref<ElementType>&, const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&) [with ProxyType = dihedral_proxy]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:110:17:   required from here
+  110 |                 shared_proxy_remove, (
+      |                 ^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<unsigned int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  187 |       if (match_ctr != i_seqs.size()) {
+      |           ~~~~~~~~~~^~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp:8:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
+g++ -o cctbx/masks/boost_python/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/masks/boost_python/masks_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -8127,17 +8159,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp:8:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -8182,54 +8203,12 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:10:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::map<unsigned int, cctbx::geometry_restraints::bond_params> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::map<unsigned int, cctbx::geometry_restraints::bond_params> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = std::map<unsigned int, cctbx::geometry_restraints::bond_params>; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
-  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  131 |         w_t,
-      |         ~~~~                                        
-  132 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  133 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:129:23:   required from here
-  129 |       shared_w_t::wrap(
-      |       ~~~~~~~~~~~~~~~~^
-  130 |         "bond_params_table")
-      |         ~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::bond_simple_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::bond_simple_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
-  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  131 |         w_t,
-      |         ~~~~                                        
-  132 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  133 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:232:25:   required from here
-  232 |         shared_w_t::wrap(
-      |         ~~~~~~~~~~~~~~~~^
-  233 |           "shared_bond_simple_proxy")
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::bond_asu_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::bond_asu_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:11:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::dihedral_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::geometry_restraints::dihedral_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::dihedral_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
   130 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   131 |         w_t,
@@ -8238,14 +8217,25 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   133 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:340:25:   required from here
-  340 |         shared_w_t::wrap(
-      |         ~~~~~~~~~~~~~~~~^
-  341 |           "shared_bond_asu_proxy")
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:84:65:   required from here
+   84 |         scitbx::af::boost_python::shared_wrapper<w_t, rir>::wrap(
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
+   85 |           "shared_dihedral_proxy")
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~                               
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_sorted.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp:9:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -8280,12 +8270,58 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
   176 |         else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1;
       |                  ~~^~~~~~~~~~~~~~~~~~
+g++ -o cctbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/math/boost_python/math_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
+  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+g++ -o cctbx/math/time_trigonometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/math/time_trigonometry.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
+  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/merging/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/merging/ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h: In instantiation of ‘int cctbx::crystal::direct_space_asu::asu_mappings<FloatType, IntShiftType>::find_i_sym(unsigned int, const cctbx::sgtbx::rt_mx&) const [with FloatType = double; IntShiftType = int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/pair_tables.h:643:46:   required from ‘bool cctbx::crystal::pair_asu_table<FloatType, IntShiftType>::process_pair(unsigned int, unsigned int, const cctbx::sgtbx::rt_mx&) [with FloatType = double; IntShiftType = int]’
+  643 |         int j_sym = asu_mappings_->find_i_sym(j_seq, rt_mx_j);
+      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/pair_tables.h:543:35:   required from ‘cctbx::crystal::pair_asu_table<FloatType, IntShiftType>& cctbx::crystal::pair_asu_table<FloatType, IntShiftType>::add_pair(const scitbx::af::tiny<unsigned int, 2>&) [with FloatType = double; IntShiftType = int]’
+  543 |         bool is_new = process_pair(i_seqs[0], i_seqs[1], rt_mx_ji);
+      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond_sorted.h:16:30:   required from here
+   16 |       pair_asu_table.add_pair(bond_simple_proxies[i].i_seqs);
+      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:859:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<cctbx::crystal::direct_space_asu::asu_mapping<double, int>, std::allocator<cctbx::crystal::direct_space_asu::asu_mapping<double, int> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  859 |           for(int i_sym=0; i_sym<mappings_const_ref_[i_seq].size(); i_sym++) {
+      |                            ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:869:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<cctbx::crystal::direct_space_asu::asu_mapping<double, int>, std::allocator<cctbx::crystal::direct_space_asu::asu_mapping<double, int> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  869 |           for(int i_sym=0; i_sym<mappings_const_ref_[i_seq].size(); i_sym++) {
+      |                            ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o cctbx/miller/boost_python/amplitude_normalisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/amplitude_normalisation.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/boost_python/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/asu.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/math/time_trigonometry -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/math/time_trigonometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_timer -lm
 g++ -o cctbx/miller/boost_python/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/bins.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/boost_python/change_basis.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/change_basis.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/boost_python/expand_to_p1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/expand_to_p1.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/boost_python/f_calc_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/f_calc_map.cpp
@@ -8299,15 +8335,6 @@
 g++ -o cctbx/miller/boost_python/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/match_bijvoet_mates.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/boost_python/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/match_indices.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/miller/boost_python/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/match_multi_indices.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/miller/boost_python/merge_equivalents.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/merge_equivalents.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/miller/boost_python/miller_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/miller_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/miller/boost_python/phase_integrator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/phase_integrator.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::vec3<double>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
   132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
@@ -8330,6 +8357,15 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
   132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
       |                                                ^~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/miller/boost_python/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/match_multi_indices.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/miller/boost_python/merge_equivalents.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/merge_equivalents.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/miller/boost_python/miller_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/miller_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/miller/boost_python/phase_integrator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/phase_integrator.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/boost_python/phase_transfer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/phase_transfer.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/miller/boost_python/randomize_amplitude_and_phase.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/boost_python/randomize_amplitude_and_phase.cpp
@@ -8393,9 +8429,9 @@
 g++ -o cctbx/translation_search/boost_python/fast_terms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/translation_search/boost_python/fast_terms.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/translation_search/boost_python/symmetry_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/translation_search/boost_python/symmetry_flags.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/translation_search/boost_python/translation_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/translation_search/boost_python/translation_search_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/uctbx/boost_python/fast_minimum_reduction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx/boost_python/fast_minimum_reduction.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o cctbx/uctbx/boost_python/uctbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx/boost_python/uctbx_ext.cpp
@@ -8430,28 +8466,22 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/gradients_direct.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/each_hkl_gradients_direct.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp:3:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/curvatures_simple.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/curvatures_simple.cpp:3:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
-g++ -o cctbx/xray/boost_python/scatterer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/xray/boost_python/scatterer_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/curvatures_simple.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/curvatures_simple.cpp:3:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/gradients_direct.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/each_hkl_gradients_direct.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp:3:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
-g++ -o cctbx/xray/boost_python/scattering_type_registry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/xray/boost_python/sigmaa.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/sigmaa.cpp
+g++ -o cctbx/xray/boost_python/scatterer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
@@ -8474,7 +8504,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-g++ -o cctbx/xray/boost_python/structure_factors_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx.h:11,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6,
@@ -8497,7 +8526,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    69 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -8541,9 +8569,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    69 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
-g++ -o cctbx/xray/boost_python/structure_factors_simple.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp
+g++ -o cctbx/xray/boost_python/scatterer_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o cctbx/xray/boost_python/targets.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/targets.cpp
+g++ -o cctbx/xray/boost_python/scattering_type_registry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
@@ -8554,25 +8582,10 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
-g++ -o cctbx/xray/boost_python/twin_components.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/twin_components.cpp
+g++ -o cctbx/xray/boost_python/sigmaa.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/sigmaa.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/xray/boost_python/structure_factors_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/gradients_direct.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/gradients_direct.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/sampling_base.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/sampled_model_density.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/sampled_model_density.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -8616,7 +8629,19 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    69 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
-g++ -o cctbx/xray/boost_python/twin_targets.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/twin_targets.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/gradients_direct.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/gradients_direct.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
+g++ -o cctbx/xray/boost_python/structure_factors_simple.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/xray/boost_python/targets.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/targets.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/xray/boost_python/twin_components.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/twin_components.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
@@ -8639,8 +8664,13 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-g++ -o cctbx/xray/boost_python/xray_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/xray_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/minimization.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/minimization.cpp:8:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx.h:11,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6,
@@ -8663,6 +8693,42 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    69 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
+  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
+  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:10:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/sampling_base.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/sampled_model_density.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/sampled_model_density.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/match_indices.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/lookup_utils.h:11,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/f_model.h:11,
@@ -8705,59 +8771,9 @@
 /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here
   131 |     struct binary_function
       |            ^~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
-  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
-  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:10:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-g++ -o cctbx/xray/observations/boost_python/observations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/observations/boost_python/observations.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx.h:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_constraints.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:4:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain<ElementType, N>::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:50:33:   required from ‘scitbx::af::small<ElementType, N>::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’
-   50 |         : base_class(first, last)
-      |                                 ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering.h:155:11:   required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base<N>::fetch() const [with long unsigned int N = 4]’
-  155 |           small_t(entry_->a, entry_->a+N),
-      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:192:40:   required from here
-  191 |             ugs[ui] = eltbx::xray_scattering::it1992(
-      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  192 |               pair->first, exact).fetch();
-      |               ~~~~~~~~~~~~~~~~~~~~~~~~~^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
-   69 |         if (N < last - first) throw_range_error();
-      |             ~~^~~~~~~~~~~~~~
-g++ -o cctbx/xray/observations/boost_python/observations_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/observations/boost_python/observations_ext.cpp
+g++ -o cctbx/xray/boost_python/twin_targets.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/twin_targets.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/xray/boost_python/xray_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/xray_ext.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -8779,58 +8795,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/minimization.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/minimization.cpp:8:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/f_model.h: In instantiation of ‘cctbx::xray::f_model_core_data::f_model_core_data<FloatType> cctbx::xray::f_model_core_data::f_model_core_data<FloatType>::select(const scitbx::af::const_ref<int, scitbx::af::trivial_accessor>&) const [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/f_model_bpl.cpp:174:32:   required from here
-  174 |           .def("select", &w_t::select)
-      |                                ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/f_model.h:732:38: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  732 |          CCTBX_ASSERT( iselection[ii]<hkl_.size() );
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/f_model.h:732:10: note: in expansion of macro ‘CCTBX_ASSERT’
-  732 |          CCTBX_ASSERT( iselection[ii]<hkl_.size() );
-      |          ^~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/sampling_base.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/sampling_base.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
-  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-g++ -o cctbx/xray/targets/shelxl_wght_ls_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
-  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o chiltbx/handle_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/chiltbx/handle_test.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/xray/observations/boost_python/observations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/observations/boost_python/observations.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:9:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/parameter_map.h: In instantiation of ‘void cctbx::xray::parameter_map<XRayScattererType>::init_scatterer_part(const scitbx::af::const_ref<ElementType>&) [with XRayScattererType = cctbx::xray::scatterer<>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/parameter_map.h:54:7:   required from ‘cctbx::xray::parameter_map<XRayScattererType>::parameter_map(const scitbx::af::const_ref<ElementType>&) [with XRayScattererType = cctbx::xray::scatterer<>]’
@@ -8897,6 +8863,32 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/parameter_map.h:61:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::xray::scatterer<>, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    61 |       for(int i_sc=0; i_sc < scatterers.size(); ++i_sc) {
       |                       ~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/f_model.h: In instantiation of ‘cctbx::xray::f_model_core_data::f_model_core_data<FloatType> cctbx::xray::f_model_core_data::f_model_core_data<FloatType>::select(const scitbx::af::const_ref<int, scitbx::af::trivial_accessor>&) const [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/f_model_bpl.cpp:174:32:   required from here
+  174 |           .def("select", &w_t::select)
+      |                                ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/f_model.h:732:38: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  732 |          CCTBX_ASSERT( iselection[ii]<hkl_.size() );
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/f_model.h:732:10: note: in expansion of macro ‘CCTBX_ASSERT’
+  732 |          CCTBX_ASSERT( iselection[ii]<hkl_.size() );
+      |          ^~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o cctbx/xray/observations/boost_python/observations_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/observations/boost_python/observations_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
+  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/match_indices.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/lookup_utils.h:11,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h:14,
@@ -8936,29 +8928,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/match.h:33:20: warning: ‘template<class _Arg1, class _Arg2, class _Result> struct std::binary_function’ is deprecated [-Wdeprecated-declarations]
    33 |       typedef std::binary_function<NumType, NumType, NumType> base_type;
       |                    ^~~~~~~~~~~~~~~
-/usr/include/c++/14/bits/stl_function.h:131:12: note: declared here
-  131 |     struct binary_function
-      |            ^~~~~~~~~~~~~~~
-g++ -o cma_es/cma/cmaes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cma_es/cma/cmaes.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
-  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
    47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
@@ -8969,34 +8938,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-g++ -o cma_es/cma_es_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cma_es/cma_es_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o dxtbx/src/dxtbx/boost_python/compression.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘FloatType cctbx::xray::grouped_data::merger<FloatType>::bic() [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29:   required from here
-   68 |           .def("bic", &w_t::bic)
-      |                             ^~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h:257:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  257 |         for (long int ii=0;ii<asu_hkl_.size();ii++){
-      |                            ~~^~~~~~~~~~~~~~~~
-g++ -o chiltbx/handle_test -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread chiltbx/handle_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘FloatType cctbx::xray::grouped_data::merger<FloatType>::r_abs() [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:69:31:   required from here
-   69 |           .def("r_abs", &w_t::r_abs)
-      |                               ^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h:271:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  271 |         for (long int ii=0;ii<asu_hkl_.size();ii++){
-      |                            ~~^~~~~~~~~~~~~~~~
+/usr/include/c++/14/bits/stl_function.h:131:12: note: declared here
+  131 |     struct binary_function
+      |            ^~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:3:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer.cpp:3:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
@@ -9023,6 +8970,26 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    69 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
+g++ -o cctbx/xray/targets/shelxl_wght_ls_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o chiltbx/handle_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/chiltbx/handle_test.cpp
+g++ -o cma_es/cma/cmaes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cma_es/cma/cmaes.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘FloatType cctbx::xray::grouped_data::merger<FloatType>::bic() [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29:   required from here
+   68 |           .def("bic", &w_t::bic)
+      |                             ^~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h:257:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  257 |         for (long int ii=0;ii<asu_hkl_.size();ii++){
+      |                            ~~^~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘FloatType cctbx::xray::grouped_data::merger<FloatType>::r_abs() [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:69:31:   required from here
+   69 |           .def("r_abs", &w_t::r_abs)
+      |                               ^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h:271:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  271 |         for (long int ii=0;ii<asu_hkl_.size();ii++){
+      |                            ~~^~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘std::vector<T> cctbx::xray::grouped_data::merger<FloatType>::combine_obs(long int) [with FloatType = double]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h:258:24:   required from ‘FloatType cctbx::xray::grouped_data::merger<FloatType>::bic() [with FloatType = double]’
   258 |           tmp_result = combine_obs( ii );
@@ -9038,19 +9005,49 @@
       |                       ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/structure_factors_direct.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/sigmaa.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/sigmaa.cpp:8:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/sampling_base.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/sampling_base.cpp:3:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors<TableType>::set(const scitbx::af::ref<ScattererType>&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::henke::table]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer.cpp:349:54:   required from here
+  349 |         inelastic_form_factors<eltbx::henke::table>::set,
+      |                                                      ^~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::xray::scatterer<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  426 |       for (int i=0; i < scatterers.size(); ++i) {
+      |                     ~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors<TableType>::set(const scitbx::af::ref<ScattererType>&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::sasaki::table]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer.cpp:353:55:   required from here
+  353 |         inelastic_form_factors<eltbx::sasaki::table>::set,
+      |                                                       ^~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::xray::scatterer<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  426 |       for (int i=0; i < scatterers.size(); ++i) {
+      |                     ~~^~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
+  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
+  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+g++ -o cma_es/cma_es_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cma_es/cma_es_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘cctbx::xray::grouped_data::unmerged_data<FloatType>::unmerged_data(scitbx::af::const_ref<cctbx::miller::index<> >, scitbx::af::const_ref<cctbx::miller::index<> >, const cctbx::sgtbx::space_group&, const bool&) [with FloatType = double]’:
 /usr/include/boost/python/object/value_holder.hpp:131:11:   required from ‘boost::python::objects::value_holder<Value>::value_holder(PyObject*, A0, A1, A2, A3) [with A0 = boost::python::objects::reference_to_value<const scitbx::af::const_ref<cctbx::miller::index<> >&>; A1 = boost::python::objects::reference_to_value<const scitbx::af::const_ref<cctbx::miller::index<> >&>; A2 = boost::python::objects::reference_to_value<const cctbx::sgtbx::space_group&>; A3 = boost::python::objects::reference_to_value<const bool&>; Value = cctbx::xray::grouped_data::unmerged_data<double>; PyObject = _object]’
   131 |       PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a))
@@ -9247,58 +9244,22 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/grouped_data.h:167:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   167 |         for (int ii=0; ii<unique.size();ii++){
       |                        ~~^~~~~~~~~~~~~~
-g++ -o dxtbx/src/dxtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
-  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
-  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-g++ -o lib/libcctbx_sgtbx_asu.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libcctbx_sgtbx_asu.so.0 cctbx/sgtbx/direct_space_asu/proto/cut.o cctbx/sgtbx/direct_space_asu/proto/reference_table.o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lm
-In file included from /usr/include/boost/assert.hpp:58,
-                 from /usr/include/boost/smart_ptr/shared_array.hpp:23,
-                 from /usr/include/boost/shared_array.hpp:17,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::xray::scatterer_flags>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::xray::scatterer_flags>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::xray::scatterer_flags; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
-  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  131 |         w_t,
-      |         ~~~~                                        
-  132 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  133 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:142:44:   required from here
-  140 |       class_<wt> wrapper = scitbx::af::boost_python::shared_wrapper<
-      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  141 |         scatterer_flags,
-      |         ~~~~~~~~~~~~~~~~                    
-  142 |         return_internal_reference<> >::wrap("shared_scatterer_flags");
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:7:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
+g++ -o dxtbx/src/dxtbx/boost_python/compression.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o chiltbx/handle_test -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread chiltbx/handle_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -9320,20 +9281,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors<TableType>::set(const scitbx::af::ref<ScattererType>&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::henke::table]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer.cpp:349:54:   required from here
-  349 |         inelastic_form_factors<eltbx::henke::table>::set,
-      |                                                      ^~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::xray::scatterer<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  426 |       for (int i=0; i < scatterers.size(); ++i) {
-      |                     ~~^~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors<TableType>::set(const scitbx::af::ref<ScattererType>&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::sasaki::table]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer.cpp:353:55:   required from here
-  353 |         inelastic_form_factors<eltbx::sasaki::table>::set,
-      |                                                       ^~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::xray::scatterer<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  426 |       for (int i=0; i < scatterers.size(); ++i) {
-      |                     ~~^~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -9345,6 +9292,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
+g++ -o dxtbx/src/dxtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
    47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
@@ -9355,14 +9303,89 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /usr/include/boost/assert.hpp:58,
+                 from /usr/include/boost/smart_ptr/shared_array.hpp:23,
+                 from /usr/include/boost/shared_array.hpp:17,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<cctbx::xray::scatterer_flags>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<cctbx::xray::scatterer_flags>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = cctbx::xray::scatterer_flags; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  131 |         w_t,
+      |         ~~~~                                        
+  132 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  133 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:142:44:   required from here
+  140 |       class_<wt> wrapper = scitbx::af::boost_python::shared_wrapper<
+      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  141 |         scatterer_flags,
+      |         ~~~~~~~~~~~~~~~~                    
+  142 |         return_internal_reference<> >::wrap("shared_scatterer_flags");
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx.h:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_constraints.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:4:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain<ElementType, N>::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:50:33:   required from ‘scitbx::af::small<ElementType, N>::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’
+   50 |         : base_class(first, last)
+      |                                 ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering.h:155:11:   required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base<N>::fetch() const [with long unsigned int N = 4]’
+  155 |           small_t(entry_->a, entry_->a+N),
+      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:192:40:   required from here
+  191 |             ugs[ui] = eltbx::xray_scattering::it1992(
+      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  192 |               pair->first, exact).fetch();
+      |               ~~~~~~~~~~~~~~~~~~~~~~~~~^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
+   69 |         if (N < last - first) throw_range_error();
+      |             ~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: At global scope:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:49:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
+   49 |     std::auto_ptr<w_t>
+      |          ^~~~~~~~
+In file included from /usr/include/c++/14/memory:78,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/misc.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_flags.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:4:
+/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
+   59 |   template<typename> class auto_ptr;
+      |                            ^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: In static member function ‘static std::auto_ptr<cctbx::xray::scattering_type_registry> cctbx::xray::boost_python::{anonymous}::scattering_type_registry_wrappers::constructor_for_pickle(const boost::python::dict&, const boost::python::list&, const cctbx::xray::scattering_type_registry::unique_counts_t&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:55:12: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
+   55 |       std::auto_ptr<w_t> self(new w_t);
+      |            ^~~~~~~~
+/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
+   59 |   template<typename> class auto_ptr;
+      |                            ^~~~~~~~
+g++ -o lib/libcctbx_sgtbx_asu.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libcctbx_sgtbx_asu.so.0 cctbx/sgtbx/direct_space_asu/proto/cut.o cctbx/sgtbx/direct_space_asu/proto/reference_table.o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lm
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/structure_factors_simple.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp:3:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/sigmaa.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/sigmaa.cpp:8:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
+g++ -o dxtbx/src/dxtbx/boost_python/flumpy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘unsigned int dxtbx::boost_python::cbf_decompress(const char*, std::size_t, int*, std::size_t)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:124:50: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   124 |   while ((j < packed_sz) && ((values - original) < values_sz)) {
@@ -9383,30 +9406,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:279:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare]
   279 |     for (int i = 0; i < nrest; i++) {
       |                     ~~^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: At global scope:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:49:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
-   49 |     std::auto_ptr<w_t>
-      |          ^~~~~~~~
-In file included from /usr/include/c++/14/memory:78,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/misc.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer_flags.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:4:
-/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
-   59 |   template<typename> class auto_ptr;
-      |                            ^~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: In static member function ‘static std::auto_ptr<cctbx::xray::scattering_type_registry> cctbx::xray::boost_python::{anonymous}::scattering_type_registry_wrappers::constructor_for_pickle(const boost::python::dict&, const boost::python::list&, const cctbx::xray::scattering_type_registry::unique_counts_t&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:55:12: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
-   55 |       std::auto_ptr<w_t> self(new w_t);
-      |            ^~~~~~~~
-/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
-   59 |   template<typename> class auto_ptr;
-      |                            ^~~~~~~~
-g++ -o dxtbx/src/dxtbx/boost_python/flumpy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
@@ -9472,76 +9471,14 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    69 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx.h:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_constraints.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:4:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain<ElementType, N>::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:50:33:   required from ‘scitbx::af::small<ElementType, N>::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’
-   50 |         : base_class(first, last)
-      |                                 ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering.h:155:11:   required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base<N>::fetch() const [with long unsigned int N = 4]’
-  155 |           small_t(entry_->a, entry_->a+N),
-      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:192:40:   required from here
-  191 |             ugs[ui] = eltbx::xray_scattering::it1992(
-      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  192 |               pair->first, exact).fetch();
-      |               ~~~~~~~~~~~~~~~~~~~~~~~~~^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
-   69 |         if (N < last - first) throw_range_error();
-      |             ~~^~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
-  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
-   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
-      |     ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
-  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  185 |         for (int j = 0; j < tensor_t::size(); j++) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-Create symlinks for: 'lib/libcctbx_sgtbx_asu.so.0.0.1'
-    'lib/libcctbx_sgtbx_asu.so.0'->'lib/libcctbx_sgtbx_asu.so.0.0.1'
-    'lib/libcctbx_sgtbx_asu.so'->'lib/libcctbx_sgtbx_asu.so.0.0.1'
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx.h:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_constraints.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:4:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain<ElementType, N>::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:50:33:   required from ‘scitbx::af::small<ElementType, N>::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’
-   50 |         : base_class(first, last)
-      |                                 ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering.h:155:11:   required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base<N>::fetch() const [with long unsigned int N = 4]’
-  155 |           small_t(entry_->a, entry_->a+N),
-      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:192:40:   required from here
-  191 |             ugs[ui] = eltbx::xray_scattering::it1992(
-      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  192 |               pair->first, exact).fetch();
-      |               ~~~~~~~~~~~~~~~~~~~~~~~~~^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
-   69 |         if (N < last - first) throw_range_error();
-      |             ~~^~~~~~~~~~~~~~
-g++ -o dxtbx/src/dxtbx/boost_python/imageset_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/structure_factors_direct.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
 In file included from /usr/include/boost/assert.hpp:58,
                  from /usr/include/boost/smart_ptr/shared_ptr.hpp:25,
                  from /usr/include/boost/shared_ptr.hpp:17,
@@ -9601,38 +9538,141 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+Create symlinks for: 'lib/libcctbx_sgtbx_asu.so.0.0.1'
+    'lib/libcctbx_sgtbx_asu.so.0'->'lib/libcctbx_sgtbx_asu.so.0.0.1'
+    'lib/libcctbx_sgtbx_asu.so'->'lib/libcctbx_sgtbx_asu.so.0.0.1'
+g++ -o dxtbx/src/dxtbx/boost_python/imageset_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
+  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
+  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
 g++ -o lib/libasymmetric_map.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libasymmetric_map.so.0 cctbx/maptbx/asymmetric_map.o cctbx/maptbx/skeletons.o cctbx/maptbx/dijkstra.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm
 g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lm
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/structure_factors_simple.h:12,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
 g++ -o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx.h:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_constraints.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:4:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain<ElementType, N>::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:50:33:   required from ‘scitbx::af::small<ElementType, N>::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’
+   50 |         : base_class(first, last)
+      |                                 ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering.h:155:11:   required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base<N>::fetch() const [with long unsigned int N = 4]’
+  155 |           small_t(entry_->a, entry_->a+N),
+      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:192:40:   required from here
+  191 |             ugs[ui] = eltbx::xray_scattering::it1992(
+      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  192 |               pair->first, exact).fetch();
+      |               ~~~~~~~~~~~~~~~~~~~~~~~~~^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
+   69 |         if (N < last - first) throw_range_error();
+      |             ~~^~~~~~~~~~~~~~
 g++ -o dxtbx/src/dxtbx/format/boost_python/image_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/nexus_ext.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o dxtbx/src/dxtbx/masking/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o dxtbx/src/dxtbx/model/boost_python/beam.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc
 Create symlinks for: 'lib/libasymmetric_map.so.0.0.1'
     'lib/libasymmetric_map.so.0'->'lib/libasymmetric_map.so.0.0.1'
     'lib/libasymmetric_map.so'->'lib/libasymmetric_map.so.0.0.1'
+g++ -o dxtbx/src/dxtbx/masking/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o bin/cctbx_blobs -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/maptbx/blobs_cmd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm
+g++ -o dxtbx/src/dxtbx/model/boost_python/beam.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc
 g++ -o dxtbx/src/dxtbx/model/boost_python/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o bin/cctbx_blobs -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/maptbx/blobs_cmd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm
 g++ -o dxtbx/src/dxtbx/model/boost_python/detector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o dxtbx/src/dxtbx/model/boost_python/experiment.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75:   required from here
+  203 |             new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4<double>; std::size_t = long unsigned int]’
+   47 |     initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space);
+      |     ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75:   required from here
+  214 |             new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true));
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  185 |         for (int j = 0; j < tensor_t::size(); j++) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
 g++ -o dxtbx/src/dxtbx/model/boost_python/experiment_list.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o dxtbx/src/dxtbx/model/boost_python/goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/uctbx.h:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_constraints.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:4:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain<ElementType, N>::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:50:33:   required from ‘scitbx::af::small<ElementType, N>::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’
+   50 |         : base_class(first, last)
+      |                                 ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/eltbx/xray_scattering.h:155:11:   required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base<N>::fetch() const [with long unsigned int N = 4]’
+  155 |           small_t(entry_->a, entry_->a+N),
+      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scattering_type_registry.h:192:40:   required from here
+  191 |             ugs[ui] = eltbx::xray_scattering::it1992(
+      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  192 |               pair->first, exact).fetch();
+      |               ~~~~~~~~~~~~~~~~~~~~~~~~~^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
+   69 |         if (N < last - first) throw_range_error();
+      |             ~~^~~~~~~~~~~~~~
 g++ -o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.cc
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o dxtbx/src/dxtbx/model/boost_python/model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/model_ext.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o dxtbx/src/dxtbx/model/boost_python/panel.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/parallax_correction.cc
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/match_indices.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/lookup_utils.h:11,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/twin_targets.h:14,
@@ -9675,9 +9715,44 @@
 /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here
   131 |     struct binary_function
       |            ^~~~~~~~~~~~~~~
-g++ -o dxtbx/src/dxtbx/model/boost_python/panel.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/parallax_correction.cc
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/io.hpp:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/close_chain.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem.hpp:10,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/targets/shelxl_wght_ls.hpp:1,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp:23:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   63 |       if (i < sz) s[i++] = c;
+      |           ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   40 |       if (pos < 0 || pos >= command_line_args.buffer.size()) {
+      |                      ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:9:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
+  115 |           if (dexp <= ad_hoc_limits::max_digit_count) {
+      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  653 |         if (iw+1 != ed.size()) {
+      |             ~~~~~^~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/variant.hpp:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:7:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   93 |                 if (c0e[0] == i0) {
+      |                     ~~~~~~~^~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:8:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
+  704 |             while (pos < internal_file_len) {
+      |                    ~~~~^~~~~~~~~~~~~~~~~~~
+g++ -o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::shared<bool> cctbx::xray::twin_targets::twin_completion<FloatType>::get_free_model_selection(scitbx::af::const_ref<cctbx::miller::index<> >, const scitbx::af::const_ref<bool>&) [with FloatType = double]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:42:50:   required from here
@@ -9879,8 +9954,29 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/twin_targets.h:948:17: note: in expansion of macro ‘CCTBX_ASSERT’
   948 |                 CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug
       |                 ^~~~~~~~~~~~
-g++ -o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc
+g++ -o dxtbx/src/dxtbx/model/boost_python/scan.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘scitbx::af::flex_int dxtbx::boost_python::uncompress(const boost::python::api::object&, const int&, const int&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
+  184 |     DXTBX_ASSERT(nn == (slow * fast));
+      |                  ~~~^~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:5: note: in expansion of macro ‘DXTBX_ASSERT’
+  184 |     DXTBX_ASSERT(nn == (slow * fast));
+      |     ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘void dxtbx::boost_python::radial_average(scitbx::af::versa<double, scitbx::af::flex_grid<> >&, scitbx::af::versa<bool, scitbx::af::flex_grid<> >&, const scitbx::vec2<int>&, scitbx::af::shared<double>, scitbx::af::shared<double>, scitbx::af::shared<int>, double, double, const scitbx::vec2<int>&, const scitbx::vec2<int>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:219:43: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
+  219 |     for (std::size_t y = upper_left[1]; y < lower_right[1]; y++) {
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:220:45: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
+  220 |       for (std::size_t x = upper_left[0]; x < lower_right[0]; x++) {
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘cctbx::xray::twin_targets::hemihedral_r_values<FloatType>::hemihedral_r_values(const scitbx::af::const_ref<cctbx::miller::index<> >&, const scitbx::af::const_ref<cctbx::miller::index<> >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3<NumType>&) [with FloatType = double]’:
 /usr/include/boost/python/object/value_holder.hpp:131:11:   required from ‘boost::python::objects::value_holder<Value>::value_holder(PyObject*, A0, A1, A2, A3, A4) [with A0 = boost::python::objects::reference_to_value<const scitbx::af::const_ref<cctbx::miller::index<> >&>; A1 = boost::python::objects::reference_to_value<const scitbx::af::const_ref<cctbx::miller::index<> >&>; A2 = boost::python::objects::reference_to_value<const cctbx::sgtbx::space_group&>; A3 = boost::python::objects::reference_to_value<const bool&>; A4 = boost::python::objects::reference_to_value<const scitbx::mat3<double>&>; Value = cctbx::xray::twin_targets::hemihedral_r_values<double>; PyObject = _object]’
   131 |       PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a))
@@ -9975,18 +10071,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/twin_targets.h:544:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   544 |       for (long ii=0;ii<hkl_obs.size();ii++){
       |                      ~~^~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/io.hpp:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/close_chain.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem.hpp:10,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/targets/shelxl_wght_ls.hpp:1,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp:23:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   63 |       if (i < sz) s[i++] = c;
-      |           ~~^~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/twin_targets.h:10:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/quadrature.h: In instantiation of ‘FloatType scitbx::math::quadrature::gauss_legendre_engine<FloatType>::refine(const FloatType&) [with FloatType = double]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/quadrature.h:523:14:   required from ‘scitbx::math::quadrature::gauss_legendre_engine<FloatType>::gauss_legendre_engine(const int&) [with FloatType = double]’
@@ -10077,70 +10161,46 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/quadrature.h:546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   546 |         for (int ii=0;ii<x_.size();ii++){
       |                       ~~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   40 |       if (pos < 0 || pos >= command_line_args.buffer.size()) {
-      |                      ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:9:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
-  115 |           if (dexp <= ad_hoc_limits::max_digit_count) {
-      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  653 |         if (iw+1 != ed.size()) {
-      |             ~~~~~^~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/variant.hpp:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   93 |                 if (c0e[0] == i0) {
-      |                     ~~~~~~~^~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:8:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
-  704 |             while (pos < internal_file_len) {
-      |                    ~~~~^~~~~~~~~~~~~~~~~~~
-g++ -o dxtbx/src/dxtbx/model/boost_python/scan.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o dxtbx/src/dxtbx/model/boost_python/spectrum.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/libcbf-private.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcbf-private.so.0 cbflib_adaptbx/detectors/mar_adaptor.o cbflib_adaptbx/detectors/cbf_adaptor.o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o cbflib_adaptbx/detectors/buffer_based_service.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lhdf5 -lcbf
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp:10:1: warning: ‘typedef’ was ignored in this declaration
-   10 | typedef struct cbf_handle_struct;
-      | ^~~~~~~
 g++ -o exe_dev/cctbx.convert_ccp4_symop_lib -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/convert_ccp4_symop_lib.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm
+g++ -o exe_dev/cctbx.find_distances -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/find_distances.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm
 Create symlinks for: 'lib/libcbf-private.so.0.0.1'
     'lib/libcbf-private.so.0'->'lib/libcbf-private.so.0.0.1'
     'lib/libcbf-private.so'->'lib/libcbf-private.so.0.0.1'
 g++ -o exe_dev/cbflib.tst_memory -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cbflib_adaptbx/detectors/tst_memory.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lcbf -lcbf-private -lm -lhdf5
-g++ -o exe_dev/cctbx.find_distances -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/find_distances.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm
 g++ -o exe_dev/cctbx.getting_started -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/getting_started.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm
 g++ -o exe_dev/cctbx.lattice_symmetry -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/lattice_symmetry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm
 g++ -o exe_dev/cctbx.sym_equiv_sites -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sym_equiv_sites.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm
 g++ -o exe_dev/cctbx.sys_abs_equiv_space_groups -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sys_abs_equiv_space_groups.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘scitbx::af::flex_int dxtbx::boost_python::uncompress(const boost::python::api::object&, const int&, const int&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
-  184 |     DXTBX_ASSERT(nn == (slow * fast));
-      |                  ~~~^~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:5: note: in expansion of macro ‘DXTBX_ASSERT’
-  184 |     DXTBX_ASSERT(nn == (slow * fast));
-      |     ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘void dxtbx::boost_python::radial_average(scitbx::af::versa<double, scitbx::af::flex_grid<> >&, scitbx::af::versa<bool, scitbx::af::flex_grid<> >&, const scitbx::vec2<int>&, scitbx::af::shared<double>, scitbx::af::shared<double>, scitbx::af::shared<int>, double, double, const scitbx::vec2<int>&, const scitbx::vec2<int>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:219:43: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
-  219 |     for (std::size_t y = upper_left[1]; y < lower_right[1]; y++) {
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:220:45: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
-  220 |       for (std::size_t x = upper_left[0]; x < lower_right[0]; x++) {
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp:10:1: warning: ‘typedef’ was ignored in this declaration
+   10 | typedef struct cbf_handle_struct;
+      | ^~~~~~~
+g++ -o fable/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/font_ucs_10x20.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_10x20.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/font_ucs_8x13.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_8x13.cpp
+g++ -o gltbx/font_ucs_9x15.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_9x15.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = bool; grid<T> = scitbx::af::versa<bool, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  247 |     return get_buffer_specific(obj);
+      |            ~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/fonts_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/fonts_ext.cpp
+g++ -o gltbx/gl_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_00_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:17:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
@@ -10192,6 +10252,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning:   when initialized here [-Wreorder]
   227 |     Beam(vec3<double> direction,
       |     ^~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
@@ -10199,128 +10260,36 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
       |                                                            ^~
-g++ -o fable/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-g++ -o gltbx/font_ucs_10x20.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_10x20.cpp
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  367 |         for (std::size_t y = y0; y < y1; ++y) {
-      |                                  ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  368 |           for (std::size_t x = x0; x < x1; ++x) {
-      |                                    ~~^~~~
-g++ -o gltbx/font_ucs_8x13.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_8x13.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/font_ucs_9x15.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_9x15.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
-      |                               ~~^~~~~~~~~~
-g++ -o gltbx/fonts_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/fonts_ext.cpp
-g++ -o gltbx/gl_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_00_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o gltbx/gl_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_01_bpl.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_tuple(dxtbx::model::CrystalBase&, boost::python::tuple)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:119:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  119 |     for (std::size_t i = 0; i < boost::python::len(l); ++i) {
+      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_list(dxtbx::model::CrystalBase&, boost::python::list)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:129:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  129 |     for (std::size_t i = 0; i < boost::python::len(l); ++i) {
+      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_B_covariance_from_tuple(dxtbx::model::CrystalBase&, boost::python::api::object)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:141:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  141 |     for (std::size_t i = 0; i < boost::python::len(obj); ++i) {
+      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = long unsigned int; grid<T> = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  247 |     return get_buffer_specific(obj);
+      |            ~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:17:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
-      |       ^~~~~~~~~~~~
-g++ -o gltbx/gl_defines_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_02_bpl.cpp
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
-      |       ^~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/gl_defines_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_03_bpl.cpp
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  397 |       for (std::size_t i = 0; i < num_images_; ++i) {
-      |                               ~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared<double>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
-      |       ^~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |       ^~~~~~~~~~~~
-g++ -o gltbx/gl_defines_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_04_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/gl_defines_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_05_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:22:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:22,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc:17:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
@@ -10333,11 +10302,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning:   when initialized here [-Wreorder]
    93 |     Beam()
       |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
   562 |     double wavelength_;
@@ -10385,32 +10349,10 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
       |                                                            ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_tuple(dxtbx::model::Beam&, boost::python::tuple)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:209:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  209 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
-      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_list(dxtbx::model::Beam&, boost::python::list)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:219:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  219 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
-      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PolychromaticBeamPickleSuite::getstate(boost::python::api::object)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:302:32: warning: unused variable ‘beam’ [-Wunused-variable]
-  302 |       const PolychromaticBeam &beam =
-      |                                ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static void dxtbx::model::boost_python::PolychromaticBeamPickleSuite::setstate(boost::python::api::object, boost::python::tuple)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:308:26: warning: unused variable ‘beam’ [-Wunused-variable]
-  308 |       PolychromaticBeam &beam = boost::python::extract<PolychromaticBeam &>(obj)();
-      |                          ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  367 |         for (std::size_t y = y0; y < y1; ++y) {
-      |                                  ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  368 |           for (std::size_t x = x0; x < x1; ++x) {
-      |                                    ~~^~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:23:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:18:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
@@ -10421,6 +10363,7 @@
   328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+g++ -o gltbx/gl_defines_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_02_bpl.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
@@ -10431,6 +10374,7 @@
   449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   367 |         for (std::size_t y = y0; y < y1; ++y) {
@@ -10439,7 +10383,7 @@
   368 |           for (std::size_t x = x0; x < x1; ++x) {
       |                                    ~~^~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:18:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:20:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
   562 |     double wavelength_;
@@ -10497,59 +10441,49 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
       |                                                            ^~
-g++ -o gltbx/gl_defines_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_06_bpl.cpp
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:23:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning:   ‘scitbx::vec3<double> dxtbx::model::Beam::direction_’ [-Wreorder]
-  551 |     vec3<double> direction_;
-      |                  ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning:   when initialized here [-Wreorder]
-   93 |     Beam()
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
-  552 |     double divergence_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning:   when initialized here [-Wreorder]
-  126 |     Beam(vec3<double> direction, double wavelength)
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
-  552 |     double divergence_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning:   when initialized here [-Wreorder]
-  165 |     Beam(vec3<double> direction,
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double, scitbx::vec3<double>, double, double, double, dxtbx::model::Probe)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
-  552 |     double divergence_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning:   when initialized here [-Wreorder]
-  193 |     Beam(vec3<double> direction,
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double, scitbx::vec3<double>, double, double, double, dxtbx::model::Probe, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
-  552 |     double divergence_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning:   when initialized here [-Wreorder]
-  227 |     Beam(vec3<double> direction,
-      |     ^~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
+      |                               ~~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = unsigned char; grid<T> = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:23:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:22,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment_list.h:23,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:20:
@@ -10557,7 +10491,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
   562 |     double wavelength_;
       |            ^~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning:   ‘scitbx::vec3<double> dxtbx::model::Beam::direction_’ [-Wreorder]
   551 |     vec3<double> direction_;
       |                  ^~~~~~~~~~
@@ -10604,25 +10537,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning:   when initialized here [-Wreorder]
   227 |     Beam(vec3<double> direction,
       |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
-  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
-      |                                                    ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
-  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
-      |                                                            ^~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:25:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
-      |                               ~~^~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
-      |                               ~~^~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18:
@@ -10631,13 +10545,6 @@
   288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
-  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
-      |                                                    ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
-  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
-      |                                                            ^~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
@@ -10653,6 +10560,13 @@
   449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
+  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
+      |                                                    ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
+  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
+      |                                                            ^~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   367 |         for (std::size_t y = y0; y < y1; ++y) {
@@ -10660,8 +10574,19 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   368 |           for (std::size_t x = x0; x < x1; ++x) {
       |                                    ~~^~~~
-g++ -o gltbx/gl_defines_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_07_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  367 |         for (std::size_t y = y0; y < y1; ++y) {
+      |                                  ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  368 |           for (std::size_t x = x0; x < x1; ++x) {
+      |                                    ~~^~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
+      |                               ~~^~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:23:
@@ -10680,29 +10605,30 @@
   408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = bool; grid<T> = scitbx::af::versa<bool, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  247 |     return get_buffer_specific(obj);
-      |            ~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:25:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
+      |                               ~~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  367 |         for (std::size_t y = y0; y < y1; ++y) {
+      |                                  ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  368 |           for (std::size_t x = x0; x < x1; ++x) {
+      |                                    ~~^~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:18:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:17:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
@@ -10710,24 +10636,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
   148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
       |       ^~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
-      |                               ~~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_tuple(dxtbx::model::CrystalBase&, boost::python::tuple)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:119:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  119 |     for (std::size_t i = 0; i < boost::python::len(l); ++i) {
-      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_list(dxtbx::model::CrystalBase&, boost::python::list)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:129:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  129 |     for (std::size_t i = 0; i < boost::python::len(l); ++i) {
-      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_B_covariance_from_tuple(dxtbx::model::CrystalBase&, boost::python::api::object)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:141:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  141 |     for (std::size_t i = 0; i < boost::python::len(obj); ++i) {
-      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   242 |       DXTBX_ASSERT(new_table.size() == num_images_);
@@ -10739,13 +10647,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   397 |       for (std::size_t i = 0; i < num_images_; ++i) {
       |                               ~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  367 |         for (std::size_t y = y0; y < y1; ++y) {
-      |                                  ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  368 |           for (std::size_t x = x0; x < x1; ++x) {
-      |                                    ~~^~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
@@ -10760,6 +10661,37 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
   417 |       DXTBX_ASSERT(epochs.size() == num_images_);
       |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = short unsigned int; grid<T> = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr<dxtbx::format::Image<T> > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = bool]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40:   required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’
+  125 |       .def("__init__", make_constructor(&make_image_from_tuple<T>))
+      |                        ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24:   required from here
+  141 |     image_wrapper<bool>("ImageBool");
+      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   51 |     for (std::size_t i = 0; i < boost::python::len(data); ++i) {
+      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:25:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
+      |                               ~~^~~~~~~~~~
+g++ -o gltbx/gl_defines_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_03_bpl.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   556 |       DXTBX_ASSERT(properties_.size() == num_images_);
@@ -10767,18 +10699,48 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
   556 |       DXTBX_ASSERT(properties_.size() == num_images_);
       |       ^~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:25:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
-      |                               ~~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr<dxtbx::format::Image<T> > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40:   required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’
+  125 |       .def("__init__", make_constructor(&make_image_from_tuple<T>))
+      |                        ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23:   required from here
+  142 |     image_wrapper<int>("ImageInt");
+      |     ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   51 |     for (std::size_t i = 0; i < boost::python::len(data); ++i) {
+      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr<dxtbx::format::Image<T> > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40:   required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’
+  125 |       .def("__init__", make_constructor(&make_image_from_tuple<T>))
+      |                        ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26:   required from here
+  143 |     image_wrapper<double>("ImageDouble");
+      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   51 |     for (std::size_t i = 0; i < boost::python::len(data); ++i) {
+      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = unsigned int; grid<T> = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:19:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/goniometer.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:17:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
@@ -10811,97 +10773,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
   417 |       DXTBX_ASSERT(epochs.size() == num_images_);
       |       ^~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:20:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning:   ‘scitbx::vec3<double> dxtbx::model::Beam::direction_’ [-Wreorder]
-  551 |     vec3<double> direction_;
-      |                  ^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning:   when initialized here [-Wreorder]
-   93 |     Beam()
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
-  552 |     double divergence_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning:   when initialized here [-Wreorder]
-  126 |     Beam(vec3<double> direction, double wavelength)
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
-  552 |     double divergence_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning:   when initialized here [-Wreorder]
-  165 |     Beam(vec3<double> direction,
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double, scitbx::vec3<double>, double, double, double, dxtbx::model::Probe)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
-  552 |     double divergence_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning:   when initialized here [-Wreorder]
-  193 |     Beam(vec3<double> direction,
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double, scitbx::vec3<double>, double, double, double, dxtbx::model::Probe, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
-  562 |     double wavelength_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
-  552 |     double divergence_;
-      |            ^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning:   when initialized here [-Wreorder]
-  227 |     Beam(vec3<double> direction,
-      |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
-  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
-      |                                                    ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
-  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
-      |                                                            ^~
-g++ -o gltbx/gl_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/gl_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = long unsigned int; grid<T> = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  247 |     return get_buffer_specific(obj);
-      |            ~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |       ^~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/goniometer.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:16:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/experiment.h:19:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
@@ -10934,102 +10811,21 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
   417 |       DXTBX_ASSERT(epochs.size() == num_images_);
       |       ^~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc:14:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr<dxtbx::format::Image<T> > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = bool]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40:   required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’
-  125 |       .def("__init__", make_constructor(&make_image_from_tuple<T>))
-      |                        ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24:   required from here
-  141 |     image_wrapper<bool>("ImageBool");
-      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   51 |     for (std::size_t i = 0; i < boost::python::len(data); ++i) {
-      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr<dxtbx::format::Image<T> > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40:   required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’
-  125 |       .def("__init__", make_constructor(&make_image_from_tuple<T>))
-      |                        ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23:   required from here
-  142 |     image_wrapper<int>("ImageInt");
-      |     ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   51 |     for (std::size_t i = 0; i < boost::python::len(data); ++i) {
-      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr<dxtbx::format::Image<T> > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40:   required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’
-  125 |       .def("__init__", make_constructor(&make_image_from_tuple<T>))
-      |                        ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26:   required from here
-  143 |     image_wrapper<double>("ImageDouble");
-      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   51 |     for (std::size_t i = 0; i < boost::python::len(data); ++i) {
-      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  367 |         for (std::size_t y = y0; y < y1; ++y) {
-      |                                  ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  368 |           for (std::size_t x = x0; x < x1; ++x) {
-      |                                    ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  367 |         for (std::size_t y = y0; y < y1; ++y) {
-      |                                  ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  368 |           for (std::size_t x = x0; x < x1; ++x) {
-      |                                    ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = int; grid<T> = scitbx::af::versa<int, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+g++ -o gltbx/gl_defines_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_04_bpl.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite<T>::setstate(dxtbx::format::Image<T>&, boost::python::tuple) [with T = bool]’:
 /usr/include/boost/python/class.hpp:345:9:   required from ‘boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite<bool>; W = dxtbx::format::Image<bool>; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_<dxtbx::format::Image<bool>, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’
   345 |         &PickleSuiteType::setstate,
@@ -11067,6 +10863,51 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
    98 |       for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) {
       |                               ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = long int; grid<T> = scitbx::af::versa<long int, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |       ^~~~~~~~~~~~
+g++ -o gltbx/gl_defines_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_05_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = signed char; grid<T> = scitbx::af::versa<signed char, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite<T>::setstate(dxtbx::format::Image<T>&, boost::python::tuple) [with T = int]’:
 /usr/include/boost/python/class.hpp:345:9:   required from ‘boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite<int>; W = dxtbx::format::Image<int>; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_<dxtbx::format::Image<int>, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’
   345 |         &PickleSuiteType::setstate,
@@ -11104,6 +10945,76 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
    98 |       for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) {
       |                               ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = short int; grid<T> = scitbx::af::versa<short int, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = float; grid<T> = scitbx::af::versa<float, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = double; grid<T> = scitbx::af::versa<double, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::vec3<NumType> >) [with T = double; grid<scitbx::vec3<NumType> > = scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   88 |   for (int i = 0; i < dim_sizes.size(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   90 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::vec3<NumType> >) [with T = int; grid<scitbx::vec3<NumType> > = scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   88 |   for (int i = 0; i < dim_sizes.size(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   90 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite<T>::setstate(dxtbx::format::Image<T>&, boost::python::tuple) [with T = double]’:
 /usr/include/boost/python/class.hpp:345:9:   required from ‘boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite<double>; W = dxtbx::format::Image<double>; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_<dxtbx::format::Image<double>, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’
   345 |         &PickleSuiteType::setstate,
@@ -11141,34 +11052,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
    98 |       for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) {
       |                               ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘void dxtbx::model::boost_python::detector_detail::node_from_dict(boost::python::dict, dxtbx::model::Detector::Node*, boost::python::list, scitbx::af::ref<bool, scitbx::af::trivial_accessor>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<bool>::size_type’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   88 |         DXTBX_ASSERT(used.size() == boost::python::len(panels));
-      |                      ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:9: note: in expansion of macro ‘DXTBX_ASSERT’
-   88 |         DXTBX_ASSERT(used.size() == boost::python::len(panels));
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   89 |         DXTBX_ASSERT(idx < boost::python::len(panels));
-      |                      ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:9: note: in expansion of macro ‘DXTBX_ASSERT’
-   89 |         DXTBX_ASSERT(idx < boost::python::len(panels));
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:100:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  100 |         for (std::size_t i = 0; i < boost::python::len(obj["children"]); ++i) {
-      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:20:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
@@ -11182,37 +11065,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
   148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
       |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:124:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  124 |         for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) {
-      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:134:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  134 |         for (std::size_t i = 0; i < boost::python::len(panels); ++i) {
-      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict, const dxtbx::format::Image<double>&, const dxtbx::format::Image<double>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:158:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  158 |         for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) {
-      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:168:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  168 |         for (std::size_t i = 0; i < boost::python::len(panels); ++i) {
-      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::getstate(boost::python::api::object)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:183:25: warning: possibly dangling reference to a temporary [-Wdangling-reference]
-  183 |         const Detector &detector = boost::python::extract<const Detector &>(obj);
-      |                         ^~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:183:80: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract<const dxtbx::model::Detector&>(obj).boost::python::extract<const dxtbx::model::Detector&>::operator result_type()’
-  183 |         const Detector &detector = boost::python::extract<const Detector &>(obj);
-      |                                                                                ^
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   242 |       DXTBX_ASSERT(new_table.size() == num_images_);
@@ -11220,17 +11072,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
   242 |       DXTBX_ASSERT(new_table.size() == num_images_);
       |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static void dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::copy_node(dxtbx::model::Detector::Node::pointer, boost::python::dict, boost::python::list)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:228:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  228 |         for (std::size_t i = 0; i < boost::python::len(node["children"]); ++i) {
-      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  367 |         for (std::size_t y = y0; y < y1; ++y) {
-      |                                  ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  368 |           for (std::size_t x = x0; x < x1; ++x) {
-      |                                    ~~^~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   397 |       for (std::size_t i = 0; i < num_images_; ++i) {
@@ -11249,14 +11090,101 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
   417 |       DXTBX_ASSERT(epochs.size() == num_images_);
       |       ^~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
-      |                               ~~^~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:21:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::vec2<NumType> >) [with T = double; grid<scitbx::vec2<NumType> > = scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:138:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  138 |   for (int i = 0; i < dim_sizes.size(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:140:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  140 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::mat3<NumType> >) [with T = double; grid<scitbx::mat3<NumType> > = scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:166:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  166 |   for (int i = 0; i < dim_sizes.size(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:168:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  168 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::af::tiny<IndexValueType, 2> >) [with T = long unsigned int; grid<scitbx::af::tiny<IndexValueType, 2> > = scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:191:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  191 |   for (int i = 0; i < dim_sizes.size(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:193:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  193 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<std::complex<_Tp> >) [with T = double; grid<std::complex<_Tp> > = scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:215:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  215 |   for (int i = 0; i < dim_sizes.size(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:217:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  217 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<cctbx::miller::index<NumType> >) [with T = int; grid<cctbx::miller::index<NumType> > = scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+  249 |   return get_buffer<Q, Args...>(ptr);
+      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
+  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
+      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:113:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  113 |   for (int i = 0; i < dim_sizes.size(); ++i) {
+      |                   ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:115:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  115 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
+      |                         ~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_tuple(dxtbx::model::Beam&, boost::python::tuple)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:209:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  209 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
+      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_list(dxtbx::model::Beam&, boost::python::list)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:219:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  219 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
+      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PolychromaticBeamPickleSuite::getstate(boost::python::api::object)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:302:32: warning: unused variable ‘beam’ [-Wunused-variable]
+  302 |       const PolychromaticBeam &beam =
+      |                                ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static void dxtbx::model::boost_python::PolychromaticBeamPickleSuite::setstate(boost::python::api::object, boost::python::tuple)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:308:26: warning: unused variable ‘beam’ [-Wunused-variable]
+  308 |       PolychromaticBeam &beam = boost::python::extract<PolychromaticBeam &>(obj)();
+      |                          ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |       ^~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h:24,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:9:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
   562 |     double wavelength_;
@@ -11314,181 +11242,141 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
       |                                                            ^~
-g++ -o gltbx/gl_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_00_bpl.cpp
+g++ -o gltbx/gl_defines_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_06_bpl.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_tuple(dxtbx::model::Goniometer&, boost::python::tuple)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:79:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   79 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
+      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_list(dxtbx::model::Goniometer&, boost::python::list)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
+      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = unsigned char; grid<T> = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h:25:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  367 |         for (std::size_t y = y0; y < y1; ++y) {
+      |                                  ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  368 |           for (std::size_t x = x0; x < x1; ++x) {
+      |                                    ~~^~~~
+g++ -o gltbx/gl_defines_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_07_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/gl_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/gl_ext.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h:27:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
    89 |       for (std::size_t i = 0; i < n_angles; ++i) {
       |                               ~~^~~~~~~~~~
-g++ -o gltbx/gl_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_01_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In function ‘T* dxtbx::model::boost_python::from_dict(boost::python::dict) [with T = dxtbx::model::MultiAxisGoniometer]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:105:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-  105 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
-      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  397 |       for (std::size_t i = 0; i < num_images_; ++i) {
-      |                               ~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared<double>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList* dxtbx::model::boost_python::make_experiment_list(boost::python::api::object)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:30:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   30 |     for (std::size_t i = 0; i < boost::python::len(items); ++i) {
-      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_setitem(dxtbx::model::ExperimentList&, int, dxtbx::model::Experiment)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:174:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  174 |     if (n >= self.size() || n < 0) {
-      |         ~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::Experiment& dxtbx::model::boost_python::experiment_list_getitem(dxtbx::model::ExperimentList&, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:184:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  184 |     if (n >= self.size() || n < 0) {
-      |         ~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList dxtbx::model::boost_python::experiment_list_getitem_slice(const dxtbx::model::ExperimentList&, boost::python::slice)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:193:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
-  193 |     for (std::size_t i = as.start; i < as.stop && i < self.size(); i += as.step) {
-      |                                    ~~^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_delitem(dxtbx::model::ExperimentList&, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:203:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  203 |     if (n >= self.size() || n < 0) {
-      |         ~~^~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/goniometer.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:17:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  397 |       for (std::size_t i = 0; i < num_images_; ++i) {
-      |                               ~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared<double>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = short unsigned int; grid<T> = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = unsigned int; grid<T> = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h:24,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:9:
+g++ -o gltbx/gl_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_00_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:20:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning:   ‘scitbx::vec3<double> dxtbx::model::Beam::direction_’ [-Wreorder]
+  551 |     vec3<double> direction_;
+      |                  ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning:   when initialized here [-Wreorder]
+   93 |     Beam()
+      |     ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
+  552 |     double divergence_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning:   when initialized here [-Wreorder]
+  126 |     Beam(vec3<double> direction, double wavelength)
+      |     ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  367 |         for (std::size_t y = y0; y < y1; ++y) {
+      |                                  ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  368 |           for (std::size_t x = x0; x < x1; ++x) {
+      |                                    ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
+  552 |     double divergence_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning:   when initialized here [-Wreorder]
+  165 |     Beam(vec3<double> direction,
+      |     ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double, scitbx::vec3<double>, double, double, double, dxtbx::model::Probe)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
+  552 |     double divergence_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning:   when initialized here [-Wreorder]
+  193 |     Beam(vec3<double> direction,
+      |     ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double, scitbx::vec3<double>, double, double, double, dxtbx::model::Probe, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
+  552 |     double divergence_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning:   when initialized here [-Wreorder]
+  227 |     Beam(vec3<double> direction,
+      |     ^~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:21:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
   562 |     double wavelength_;
@@ -11539,30 +11427,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning:   when initialized here [-Wreorder]
   227 |     Beam(vec3<double> direction,
       |     ^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
-  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
-      |                                                    ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
-  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
-      |                                                            ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = int; grid<T> = scitbx::af::versa<int, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h:25:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:22:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
@@ -11573,6 +11440,13 @@
   328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
+  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
+      |                                                    ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
+  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
+      |                                                            ^~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
@@ -11583,17 +11457,13 @@
   449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = long int; grid<T> = scitbx::af::versa<long int, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
+  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
+      |                                                    ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
+  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
+      |                                                            ^~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   367 |         for (std::size_t y = y0; y < y1; ++y) {
@@ -11601,228 +11471,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   368 |           for (std::size_t x = x0; x < x1; ++x) {
       |                                    ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = signed char; grid<T> = scitbx::af::versa<signed char, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = short int; grid<T> = scitbx::af::versa<short int, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h:27:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
-      |                               ~~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = float; grid<T> = scitbx::af::versa<float, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<T>) [with T = double; grid<T> = scitbx::af::versa<double, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |   for (int i = 0; i < flex.accessor().nd(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   66 |     for (int j = i + 1; j < flex.accessor().nd(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::vec3<NumType> >) [with T = double; grid<scitbx::vec3<NumType> > = scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   88 |   for (int i = 0; i < dim_sizes.size(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   90 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::vec3<NumType> >) [with T = int; grid<scitbx::vec3<NumType> > = scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   88 |   for (int i = 0; i < dim_sizes.size(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   90 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_tuple(dxtbx::model::Goniometer&, boost::python::tuple)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:79:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   79 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
-      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_list(dxtbx::model::Goniometer&, boost::python::list)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
-      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::vec2<NumType> >) [with T = double; grid<scitbx::vec2<NumType> > = scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:138:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  138 |   for (int i = 0; i < dim_sizes.size(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:140:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  140 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::mat3<NumType> >) [with T = double; grid<scitbx::mat3<NumType> > = scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:166:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  166 |   for (int i = 0; i < dim_sizes.size(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:168:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  168 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<scitbx::af::tiny<IndexValueType, 2> >) [with T = long unsigned int; grid<scitbx::af::tiny<IndexValueType, 2> > = scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:191:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  191 |   for (int i = 0; i < dim_sizes.size(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:193:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  193 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<std::complex<_Tp> >) [with T = double; grid<std::complex<_Tp> > = scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:215:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  215 |   for (int i = 0; i < dim_sizes.size(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:217:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  217 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid<cctbx::miller::index<NumType> >) [with T = int; grid<cctbx::miller::index<NumType> > = scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-  249 |   return get_buffer<Q, Args...>(ptr);
-      |          ~~~~~~~~~~~~~~~~~~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32:   required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; Q = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; Args = {scitbx::af::versa<unsigned char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<unsigned int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<signed char, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<short int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<long int, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<float, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<double, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::vec2<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >, scitbx::af::versa<cctbx::miller::index<int>, scitbx::af::flex_grid<scitbx::af::small<long int, 10> > >}; PyObject = _object]’
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36:   required from here
-  254 |   return get_buffer<ALL_FLEX_TYPES>(obj.ptr());
-      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:113:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  113 |   for (int i = 0; i < dim_sizes.size(); ++i) {
-      |                   ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:115:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  115 |     for (int j = i + 1; j < dim_sizes.size(); ++j) {
-      |                         ~~^~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  397 |       for (std::size_t i = 0; i < num_images_; ++i) {
-      |                               ~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
-      |       ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared<double>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
-      |       ^~~~~~~~~~~~
-g++ -o gltbx/gl_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_02_bpl.cpp
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |       ^~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/gl_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_03_bpl.cpp
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc:3:
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:23:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
   562 |     double wavelength_;
@@ -11873,7 +11523,32 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning:   when initialized here [-Wreorder]
   227 |     Beam(vec3<double> direction,
       |     ^~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
+      |       ^~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:17:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
@@ -11881,19 +11556,53 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
       |                                                            ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  397 |       for (std::size_t i = 0; i < num_images_; ++i) {
+      |                               ~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared<double>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
+      |       ^~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:17:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc:14:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-g++ -o gltbx/gl_functions_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_04_bpl.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
@@ -11904,7 +11613,6 @@
   449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   367 |         for (std::size_t y = y0; y < y1; ++y) {
@@ -11912,6 +11620,25 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   368 |           for (std::size_t x = x0; x < x1; ++x) {
       |                                    ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  367 |         for (std::size_t y = y0; y < y1; ++y) {
+      |                                  ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  368 |           for (std::size_t x = x0; x < x1; ++x) {
+      |                                    ~~^~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
+      |                               ~~^~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
+      |                               ~~^~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref<bool, scitbx::af::c_grid<2> >, double, double, double)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
    79 |     for (std::size_t j = y0; j < y1; ++j) {
@@ -11919,6 +11646,10 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
    80 |       for (std::size_t i = x0; i < x1; ++i) {
       |                                ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList* dxtbx::model::boost_python::make_experiment_list(boost::python::api::object)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:30:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   30 |     for (std::size_t i = 0; i < boost::python::len(items); ++i) {
+      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref<bool, scitbx::af::c_grid<2> >, const scitbx::af::const_ref<scitbx::vec2<double> >&)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   143 |     for (std::size_t j = y0; j < y1; ++j) {
@@ -11926,52 +11657,33 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   144 |       for (std::size_t i = x0; i < x1; ++i) {
       |                                ~~^~~~
-g++ -o gltbx/gl_functions_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_05_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/gl_functions_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_06_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/gl_functions_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_07_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   93 |                 if (c0e[0] == i0) {
-      |                     ~~~~~~~^~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   63 |       if (i < sz) s[i++] = c;
-      |           ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
-  115 |           if (dexp <= ad_hoc_limits::max_digit_count) {
-      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string.hpp:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/str_ref.hpp:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/format.hpp:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:4:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp: In function ‘unsigned int fable::ext::get_code_stop(const boost::python::api::object&, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
-   24 |     TBXX_ASSERT(stop <= len_code);
-      |                 ~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’
-   59 |   if (!(condition)) { \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp: In function ‘int fable::ext::floating_point_scan_after_dot(const boost::python::api::object&, unsigned int, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:71:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
-   71 |     if (i < code_stop) {
-      |         ~~^~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc:16:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
-      |                               ~~^~~~~~~~~~
-g++ -o gltbx/gl_functions_08_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_08_bpl.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_setitem(dxtbx::model::ExperimentList&, int, dxtbx::model::Experiment)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:174:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  174 |     if (n >= self.size() || n < 0) {
+      |         ~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::Experiment& dxtbx::model::boost_python::experiment_list_getitem(dxtbx::model::ExperimentList&, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:184:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  184 |     if (n >= self.size() || n < 0) {
+      |         ~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList dxtbx::model::boost_python::experiment_list_getitem_slice(const dxtbx::model::ExperimentList&, boost::python::slice)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:193:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
+  193 |     for (std::size_t i = as.start; i < as.stop && i < self.size(); i += as.step) {
+      |                                    ~~^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_delitem(dxtbx::model::ExperimentList&, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:203:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  203 |     if (n >= self.size() || n < 0) {
+      |         ~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |       ^~~~~~~~~~~~
+g++ -o gltbx/gl_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_01_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:10:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:18:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
   562 |     double wavelength_;
@@ -12029,8 +11741,89 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
       |                                                            ^~
-g++ -o gltbx/gl_functions_09_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_09_bpl.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:18:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  397 |       for (std::size_t i = 0; i < num_images_; ++i) {
+      |                               ~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared<double>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
+      |       ^~~~~~~~~~~~
+g++ -o gltbx/gl_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_02_bpl.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:18:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  397 |       for (std::size_t i = 0; i < num_images_; ++i) {
+      |                               ~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared<double>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
+      |       ^~~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |       ^~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18:
@@ -12054,7 +11847,13 @@
   449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-g++ -o gltbx/gl_functions_10_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_10_bpl.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |       ^~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   367 |         for (std::size_t y = y0; y < y1; ++y) {
@@ -12062,31 +11861,66 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   368 |           for (std::size_t x = x0; x < x1; ++x) {
       |                                    ~~^~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:19:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
    89 |       for (std::size_t i = 0; i < n_angles; ++i) {
       |                               ~~^~~~~~~~~~
-g++ -o gltbx/gl_functions_11_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_11_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘void dxtbx::model::boost_python::detector_detail::node_from_dict(boost::python::dict, dxtbx::model::Detector::Node*, boost::python::list, scitbx::af::ref<bool, scitbx::af::trivial_accessor>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<bool>::size_type’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   88 |         DXTBX_ASSERT(used.size() == boost::python::len(panels));
+      |                      ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:9: note: in expansion of macro ‘DXTBX_ASSERT’
+   88 |         DXTBX_ASSERT(used.size() == boost::python::len(panels));
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   89 |         DXTBX_ASSERT(idx < boost::python::len(panels));
+      |                      ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:9: note: in expansion of macro ‘DXTBX_ASSERT’
+   89 |         DXTBX_ASSERT(idx < boost::python::len(panels));
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:100:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  100 |         for (std::size_t i = 0; i < boost::python::len(obj["children"]); ++i) {
+      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:124:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  124 |         for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) {
+      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:134:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  134 |         for (std::size_t i = 0; i < boost::python::len(panels); ++i) {
+      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict, const dxtbx::format::Image<double>&, const dxtbx::format::Image<double>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:158:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  158 |         for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) {
+      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:168:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  168 |         for (std::size_t i = 0; i < boost::python::len(panels); ++i) {
+      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::getstate(boost::python::api::object)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:183:25: warning: possibly dangling reference to a temporary [-Wdangling-reference]
+  183 |         const Detector &detector = boost::python::extract<const Detector &>(obj);
+      |                         ^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:183:80: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract<const dxtbx::model::Detector&>(obj).boost::python::extract<const dxtbx::model::Detector&>::operator result_type()’
+  183 |         const Detector &detector = boost::python::extract<const Detector &>(obj);
+      |                                                                                ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static void dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::copy_node(dxtbx::model::Detector::Node::pointer, boost::python::dict, boost::python::list)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:228:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  228 |         for (std::size_t i = 0; i < boost::python::len(node["children"]); ++i) {
+      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:19:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
    89 |       for (std::size_t i = 0; i < n_angles; ++i) {
       |                               ~~^~~~~~~~~~
-g++ -o gltbx/gl_functions_12_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_12_bpl.cpp
-g++ -o gltbx/gl_functions_13_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_13_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec2.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:17:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/goniometer.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:16:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
@@ -12119,14 +11953,19 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
   417 |       DXTBX_ASSERT(epochs.size() == num_images_);
       |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |       ^~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/spectrum.h:9,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:9:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec2.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:17:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
@@ -12159,6 +11998,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
   417 |       DXTBX_ASSERT(epochs.size() == num_images_);
       |       ^~~~~~~~~~~~
+g++ -o gltbx/gl_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_03_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   556 |       DXTBX_ASSERT(properties_.size() == num_images_);
@@ -12225,16 +12066,70 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
   760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
       |                                                            ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
-  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
-      |       ^~~~~~~~~~~~
-g++ -o gltbx/gl_functions_14_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_14_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/gl_functions_15_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_15_bpl.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:10:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning:   ‘scitbx::vec3<double> dxtbx::model::Beam::direction_’ [-Wreorder]
+  551 |     vec3<double> direction_;
+      |                  ^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning:   when initialized here [-Wreorder]
+   93 |     Beam()
+      |     ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
+  552 |     double divergence_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning:   when initialized here [-Wreorder]
+  126 |     Beam(vec3<double> direction, double wavelength)
+      |     ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
+  552 |     double divergence_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning:   when initialized here [-Wreorder]
+  165 |     Beam(vec3<double> direction,
+      |     ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double, scitbx::vec3<double>, double, double, double, dxtbx::model::Probe)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
+  552 |     double divergence_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning:   when initialized here [-Wreorder]
+  193 |     Beam(vec3<double> direction,
+      |     ^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3<double>, double, double, double, scitbx::vec3<double>, double, double, double, dxtbx::model::Probe, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder]
+  562 |     double wavelength_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning:   ‘double dxtbx::model::Beam::divergence_’ [-Wreorder]
+  552 |     double divergence_;
+      |            ^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning:   when initialized here [-Wreorder]
+  227 |     Beam(vec3<double> direction,
+      |     ^~~~
+g++ -o gltbx/gl_functions_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_04_bpl.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In function ‘T* dxtbx::model::boost_python::from_dict(boost::python::dict) [with T = dxtbx::model::MultiAxisGoniometer]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:105:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+  105 |       for (std::size_t i = 0; i < boost::python::len(l); ++i) {
+      |                               ~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared<scitbx::vec3<double> > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value]
+  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
+      |                                                    ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value]
+  760 |       return scitbx::af::shared<vec3<double> >(1, (0., 0., 0.));
+      |                                                            ^~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
@@ -12254,13 +12149,11 @@
   408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-g++ -o gltbx/glu_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_defines_00_bpl.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
   450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   367 |         for (std::size_t y = y0; y < y1; ++y) {
@@ -12268,10 +12161,125 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   368 |           for (std::size_t x = x0; x < x1; ++x) {
       |                                    ~~^~~~
-g++ -o gltbx/glu_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_defines_01_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/glu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/glu_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  367 |         for (std::size_t y = y0; y < y1; ++y) {
+      |                                  ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  368 |           for (std::size_t x = x0; x < x1; ++x) {
+      |                                    ~~^~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
+      |                               ~~^~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/spectrum.h:9,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:9:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2<int>, dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >&, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  148 |       DXTBX_ASSERT(properties_table.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  242 |       DXTBX_ASSERT(new_table.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  397 |       for (std::size_t i = 0; i < num_images_; ++i) {
+      |                               ~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  411 |       DXTBX_ASSERT(exposure_times.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared<double>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  417 |       DXTBX_ASSERT(epochs.size() == num_images_);
+      |       ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |                    ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’
+  556 |       DXTBX_ASSERT(properties_.size() == num_images_);
+      |       ^~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc:16:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared<double> dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2<double>, double)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+   89 |       for (std::size_t i = 0; i < n_angles; ++i) {
+      |                               ~~^~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   93 |                 if (c0e[0] == i0) {
+      |                     ~~~~~~~^~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   63 |       if (i < sz) s[i++] = c;
+      |           ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
+  115 |           if (dexp <= ad_hoc_limits::max_digit_count) {
+      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string.hpp:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/str_ref.hpp:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/format.hpp:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:4:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp: In function ‘unsigned int fable::ext::get_code_stop(const boost::python::api::object&, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
+   24 |     TBXX_ASSERT(stop <= len_code);
+      |                 ~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’
+   59 |   if (!(condition)) { \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp: In function ‘int fable::ext::floating_point_scan_after_dot(const boost::python::api::object&, unsigned int, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/ext.cpp:71:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
+   71 |     if (i < code_stop) {
+      |         ~~^~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In static member function ‘static void dxtbx::model::boost_python::ScanPickleSuite::setstate(dxtbx::model::Scan&, boost::python::tuple)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:41: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   162 |       DXTBX_ASSERT(len(properties_dict) == ncols);
@@ -12283,10 +12291,20 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:187:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::vec2<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   187 |       for (int k = 0; k < val.size(); ++k) {
       |                       ~~^~~~~~~~~~~~
+g++ -o gltbx/gl_functions_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_05_bpl.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::list dxtbx::model::boost_python::get_valid_image_ranges(dxtbx::model::Scan&, std::string)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:374:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::vec2<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   374 |       for (int k = 0; k < ranges.size(); ++k) {
       |                       ~~^~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/gl_functions_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_06_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/gl_functions_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_07_bpl.cpp
+g++ -o gltbx/gl_functions_08_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_08_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/gl_functions_09_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_09_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:24:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T* dxtbx::af::flex_table_suite::make_flex_table(boost::python::list) [with T = dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1233:42:   required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper<T>::class_type dxtbx::af::flex_table_suite::flex_table_wrapper<T>::wrap(const char*) [with T = dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_<dxtbx::af::flex_table<boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’
@@ -12625,15 +12643,17 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:890:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
   890 |     for (std::size_t i = 0; i < len(keys); ++i) {
       |                             ~~^~~~~~~~~~~
-g++ -o gltbx/glu_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_00_bpl.cpp
+g++ -o gltbx/gl_functions_10_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_10_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/glu_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_01_bpl.cpp
+g++ -o gltbx/gl_functions_11_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_11_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/glu_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_02_bpl.cpp
+g++ -o gltbx/gl_functions_12_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_12_bpl.cpp
+g++ -o gltbx/gl_functions_13_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_13_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/glu_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_03_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o gltbx/quadrics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/quadrics_ext.cpp
+g++ -o gltbx/gl_functions_14_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_14_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/gl_functions_15_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_15_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/goniometer_shadow_masking.h:12,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h:30:
@@ -12651,6 +12671,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   144 |       for (std::size_t i = x0; i < x1; ++i) {
       |                                ~~^~~~
+g++ -o gltbx/glu_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_defines_00_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::ImageBuffer dxtbx::ImageSet::get_raw_data(std::size_t)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/imageset.h:648:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   648 |     if (data_cache_.index == index) {
@@ -12788,10 +12810,24 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
   235 |       for (std::size_t i = 0; i < boost::python::len(indices); ++i) {
       |                               ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o gltbx/glu_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_defines_01_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/glu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/glu_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/glu_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_00_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/glu_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_01_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/glu_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_02_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/glu_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_03_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o gltbx/quadrics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/quadrics_ext.cpp
 g++ -o gltbx/util_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/util_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o gltbx/viewer_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/gltbx/viewer_utils_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/ccp4_map/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/cif/boost_python/cif_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/cif/boost_python/cif_ext.cpp
@@ -12815,18 +12851,42 @@
 g++ -o iotbx/mtz/column.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/mtz/column_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/mtz/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/mtz/crystal_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/mtz/dataset.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/mtz/dataset_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/mtz/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_set_grid(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::const_ref<double, scitbx::af::flex_grid<> >&, const scitbx::af::const_ref<std::__cxx11::basic_string<char> >&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:178:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  178 |     for (int i = 0; i < labels.size(); i++) {
+      |                     ~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:213:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  213 |     for (int i = 0; i < data_ref.accessor()[0]; i++) {
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  215 |       for (int j = 0; j < data_ref.accessor()[1]; j++) {
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:216:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  216 |         for (int k = 0; k < data_ref.accessor()[2]; k++) {
 g++ -o iotbx/mtz/object.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_box(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::const_ref<double, scitbx::af::flex_grid<> >&, const scitbx::af::const_ref<std::__cxx11::basic_string<char> >&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:245:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  245 |     for (int i = 0; i < labels.size(); i++) {
+      |                     ~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  278 |     for (int i = 0; i < data_ref.accessor()[0]; i++) {
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:280:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  280 |       for (int j = 0; j < data_ref.accessor()[1]; j++) {
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:281:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  281 |         for (int k = 0; k < data_ref.accessor()[2]; k++) {
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_p1_cell(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::int3&, const scitbx::af::const_ref<double, scitbx::af::c_grid_padded_periodic<3> >&, const scitbx::af::const_ref<std::__cxx11::basic_string<char> >&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:311:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  311 |     for (int i = 0; i < labels.size(); i++) {
+      |                     ~~^~~~~~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/mtz/object_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
@@ -12838,14 +12898,24 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o iotbx/pdb/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/namespace.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/atom_selection.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -12872,32 +12942,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -12912,8 +12956,8 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -12992,14 +13036,14 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o iotbx/pdb/hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/hendrickson_lattman.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/sym_equiv.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/asu.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.cpp:5:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/namespace.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/atom_selection.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -13052,68 +13096,57 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o iotbx/pdb/hierarchy_atom_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atom_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/namespace.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/construct_hierarchy.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
@@ -13159,19 +13192,12 @@
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/namespace.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/construct_hierarchy.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -13198,8 +13224,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o iotbx/pdb/hierarchy_atoms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -13226,61 +13250,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-      |           ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp: In member function ‘void iotbx::mtz::column::set_reals(const scitbx::af::const_ref<int, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref<double, scitbx::af::trivial_accessor>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp:253:48: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  253 |     IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry);
-      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp:253:5: note: in expansion of macro ‘IOTBX_ASSERT’
-  253 |     IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry);
-      |     ^~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -13333,66 +13302,46 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o iotbx/pdb/hierarchy_atoms_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/namespace.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_set_grid(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::const_ref<double, scitbx::af::flex_grid<> >&, const scitbx::af::const_ref<std::__cxx11::basic_string<char> >&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:178:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  178 |     for (int i = 0; i < labels.size(); i++) {
-      |                     ~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:213:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  213 |     for (int i = 0; i < data_ref.accessor()[0]; i++) {
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  215 |       for (int j = 0; j < data_ref.accessor()[1]; j++) {
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:216:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  216 |         for (int k = 0; k < data_ref.accessor()[2]; k++) {
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_box(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::const_ref<double, scitbx::af::flex_grid<> >&, const scitbx::af::const_ref<std::__cxx11::basic_string<char> >&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:245:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  245 |     for (int i = 0; i < labels.size(); i++) {
-      |                     ~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  278 |     for (int i = 0; i < data_ref.accessor()[0]; i++) {
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:280:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  280 |       for (int j = 0; j < data_ref.accessor()[1]; j++) {
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:281:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  281 |         for (int k = 0; k < data_ref.accessor()[2]; k++) {
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_p1_cell(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::int3&, const scitbx::af::const_ref<double, scitbx::af::c_grid_padded_periodic<3> >&, const scitbx::af::const_ref<std::__cxx11::basic_string<char> >&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/ccp4_map/ext.cpp:311:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  311 |     for (int i = 0; i < labels.size(); i++) {
-      |                     ~~^~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/namespace.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/hendrickson_lattman.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/sym_equiv.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/miller/asu.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.cpp:5:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -13419,6 +13368,133 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o iotbx/pdb/hierarchy_atom_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atom_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/hierarchy_atoms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/hierarchy_atoms_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+      |           ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp: In member function ‘void iotbx::mtz::column::set_reals(const scitbx::af::const_ref<int, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref<double, scitbx::af::trivial_accessor>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp:253:48: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  253 |     IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry);
+      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/column.cpp:253:5: note: in expansion of macro ‘IOTBX_ASSERT’
+  253 |     IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry);
+      |     ^~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+      |           ^~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+      |           ^~~~~~~~~~~~
+g++ -o iotbx/pdb/hierarchy_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -13454,31 +13530,31 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
@@ -13506,10 +13582,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o iotbx/pdb/hierarchy_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o iotbx/pdb/hierarchy_select.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_select.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   157 |   std::auto_ptr<atom_tmp_sentinel>
@@ -13553,7 +13625,6 @@
 /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
    59 |   template<typename> class auto_ptr;
       |                            ^~~~~~~~
-g++ -o iotbx/pdb/hierarchy_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_write.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
@@ -13573,7 +13644,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
   594 |           IOTBX_ASSERT(iref[i] < oldsize);
       |           ^~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.cpp: In member function ‘void iotbx::mtz::object::replace_miller_indices(const scitbx::af::const_ref<cctbx::miller::index<> >&)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.cpp:433:40: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   433 |     IOTBX_ASSERT(miller_indices.size() == n_reflections());
@@ -13595,25 +13665,22 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.cpp:684:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   684 |     for(int i=0;i<mtz_reflection_indices.size();i++) {
       |                 ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-      |           ^~~~~~~~~~~~
+g++ -o iotbx/pdb/hierarchy_select.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_select.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/hierarchy_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_write.cpp
+g++ -o iotbx/pdb/hybrid_36_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hybrid_36_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+gcc -o iotbx/pdb/hybrid_36_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hybrid_36_c.c
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/hybrid_36_cpp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hybrid_36_cpp.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/hybrid_36_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable iotbx/pdb/hybrid_36_fem.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/input.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/input_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o iotbx/pdb/input_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input_write.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -13648,7 +13715,67 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o iotbx/pdb/hybrid_36_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hybrid_36_bpl.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal_bpl.cpp:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+      |         ^~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+      |           ^~~~~~~~~~~~
+g++ -o iotbx/pdb/overall_counts.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/overall_counts.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch_bpl.cpp:6:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+      |           ^~~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
@@ -13676,28 +13803,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-gcc -o iotbx/pdb/hybrid_36_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hybrid_36_c.c
-g++ -o iotbx/pdb/hybrid_36_cpp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hybrid_36_cpp.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-      |           ^~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -13733,9 +13838,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o iotbx/pdb/hybrid_36_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable iotbx/pdb/hybrid_36_fem.cpp
+g++ -o iotbx/pdb/rna_dna_atom_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/rna_dna_atom_names_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o iotbx/pdb/input.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -13762,61 +13866,32 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o iotbx/pdb/input_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o iotbx/pdb/input_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input_write.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
-  157 |   std::auto_ptr<atom_tmp_sentinel>
-      |        ^~~~~~~~
-In file included from /usr/include/c++/14/memory:78,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/misc.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:5:
-/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
-   59 |   template<typename> class auto_ptr;
-      |                            ^~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
-  163 |   std::auto_ptr<atom_tmp_sentinel>
-      |        ^~~~~~~~
-/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
-   59 |   template<typename> class auto_ptr;
-      |                            ^~~~~~~~
-g++ -o iotbx/pdb/overall_counts.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/overall_counts.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset_bpl.cpp:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+In file included from /usr/include/boost/assert.hpp:58,
+                 from /usr/include/boost/smart_ptr/shared_array.hpp:23,
+                 from /usr/include/boost/shared_array.hpp:17,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/hendrickson_lattman.h:9,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:13:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<iotbx::mtz::crystal>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<iotbx::mtz::crystal>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-      |           ^~~~~~~~~~~~
-g++ -o iotbx/pdb/rna_dna_atom_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/rna_dna_atom_names_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = iotbx::mtz::crystal; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; std::string = std::__cxx11::basic_string<char>]’
+  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  131 |         w_t,
+      |         ~~~~                                        
+  132 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  133 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal_bpl.cpp:42:60:   required from here
+   42 |         scitbx::af::boost_python::shared_wrapper<w_t>::wrap(
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
+   43 |           "shared_crystal");
+      |           ~~~~~~~~~~~~~~~~~                                 
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
 g++ -o iotbx/pdb/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/utils.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /usr/include/boost/assert.hpp:58,
@@ -13824,11 +13899,11 @@
                  from /usr/include/boost/shared_array.hpp:17,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/hendrickson_lattman.h:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:13:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<iotbx::mtz::dataset>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<iotbx::mtz::dataset>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<iotbx::mtz::batch>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<iotbx::mtz::batch>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = iotbx::mtz::dataset; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = iotbx::mtz::batch; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; std::string = std::__cxx11::basic_string<char>]’
   130 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   131 |         w_t,
@@ -13837,15 +13912,32 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   133 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset_bpl.cpp:43:60:   required from here
-   43 |         scitbx::af::boost_python::shared_wrapper<w_t>::wrap(
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch_bpl.cpp:78:60:   required from here
+   78 |         scitbx::af::boost_python::shared_wrapper<w_t>::wrap(
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
-   44 |           "shared_dataset");
-      |           ~~~~~~~~~~~~~~~~~                                 
+   79 |           "shared_batch");
+      |           ~~~~~~~~~~~~~~~                                   
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
+  157 |   std::auto_ptr<atom_tmp_sentinel>
+      |        ^~~~~~~~
+In file included from /usr/include/c++/14/memory:78,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/misc.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:5:
+/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
+   59 |   template<typename> class auto_ptr;
+      |                            ^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
+  163 |   std::auto_ptr<atom_tmp_sentinel>
+      |        ^~~~~~~~
+/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
+   59 |   template<typename> class auto_ptr;
+      |                            ^~~~~~~~
 g++ -o iotbx/pdb/write_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -13881,9 +13973,19 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/io.hpp:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/close_chain.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem.hpp:10,
+                 from iotbx/pdb/hybrid_36_fem.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   63 |       if (i < sz) s[i++] = c;
+      |           ~~^~~~
 g++ -o iotbx/pdb/xray_structure_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/xray_structure_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -13910,36 +14012,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/io.hpp:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/close_chain.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem.hpp:10,
-                 from iotbx/pdb/hybrid_36_fem.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   63 |       if (i < sz) s[i++] = c;
-      |           ~~^~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/file_utils.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared<std::__cxx11::basic_string<char> > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   24 |       while (i < size) {
-      |              ~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   25 |         while (i < size && data[i] != '\n' && data[i] != '\r') i++;
-      |                ~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   27 |         if (i < size) {
-      |             ~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   28 |           if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') {
-      |                                  ~~~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   46 |       if (j < size) {
-      |           ~~^~~~~~
-g++ -o iotbx/shelx/shelx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/shelx/shelx_ext.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    40 |       if (pos < 0 || pos >= command_line_args.buffer.size()) {
@@ -13954,13 +14026,35 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   653 |         if (iw+1 != ed.size()) {
       |             ~~~~~^~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/variant.hpp:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:7:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    93 |                 if (c0e[0] == i0) {
       |                     ~~~~~~~^~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:8:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
+  704 |             while (pos < internal_file_len) {
+      |                    ~~~~^~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/file_utils.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/input.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared<std::__cxx11::basic_string<char> > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   24 |       while (i < size) {
+      |              ~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   25 |         while (i < size && data[i] != '\n' && data[i] != '\r') i++;
+      |                ~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   27 |         if (i < size) {
+      |             ~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   28 |           if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') {
+      |                                  ~~~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   46 |       if (j < size) {
+      |           ~~^~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
@@ -13973,7 +14067,7 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch_bpl.cpp:6:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset_bpl.cpp:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
   591 |         IOTBX_ASSERT(iref[0] < oldsize);
@@ -14026,11 +14120,36 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:8:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
-  704 |             while (pos < internal_file_len) {
-      |                    ~~~~^~~~~~~~~~~~~~~~~~~
+g++ -o iotbx/shelx/shelx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/shelx/shelx_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o iotbx/wildcard_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/wildcard_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
@@ -14061,21 +14180,46 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
   594 |           IOTBX_ASSERT(iref[i] < oldsize);
       |           ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o iotbx/xplor/boost_python/xplor_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/xplor/boost_python/xplor_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object_bpl.cpp:9:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
+  591 |         IOTBX_ASSERT(iref[0] < oldsize);
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
+  594 |           IOTBX_ASSERT(iref[i] < oldsize);
+      |           ^~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/namespace.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/overall_counts.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -14086,22 +14230,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -14112,23 +14243,18 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o lib/libann_adaptor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libann_adaptor.so.0 annlib_adaptbx/ann/ann_adaptor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lann-cctbx
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/namespace.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/overall_counts.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -14155,6 +14281,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_boost_thread_test_ext.so.0 boost_adaptbx/tests/boost_thread_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -14181,13 +14308,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp: In destructor ‘iotbx::pdb::write_utils::fstream_open_close::~fstream_open_close()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp:42:7: warning: ‘throw’ will always call ‘terminate’ [-Wterminate]
-   42 |       throw std::runtime_error(
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
-   43 |         "Failure writing to file: \"" + file_name + "\"");
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp:42:7: note: in C++11 destructors default to ‘noexcept’
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -14214,6 +14334,10 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+Create symlinks for: 'lib/libann_adaptor.so.0.0.1'
+    'lib/libann_adaptor.so.0'->'lib/libann_adaptor.so.0.0.1'
+    'lib/libann_adaptor.so'->'lib/libann_adaptor.so.0.0.1'
+g++ -o lib/annlib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=annlib_ext.so.0 annlib_adaptbx/ann/boost_python/annlib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lann-cctbx -lann_adaptor -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /usr/include/boost/assert.hpp:58,
                  from /usr/include/boost/smart_ptr/shared_array.hpp:23,
                  from /usr/include/boost/shared_array.hpp:17,
@@ -14240,77 +14364,16 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal_bpl.cpp:6:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-      |           ^~~~~~~~~~~~
-g++ -o iotbx/wildcard_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/wildcard_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /usr/include/boost/assert.hpp:58,
-                 from /usr/include/boost/smart_ptr/shared_array.hpp:23,
-                 from /usr/include/boost/shared_array.hpp:17,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/hendrickson_lattman.h:9,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:13:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<iotbx::mtz::batch>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<iotbx::mtz::batch>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = iotbx::mtz::batch; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; std::string = std::__cxx11::basic_string<char>]’
-  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  131 |         w_t,
-      |         ~~~~                                        
-  132 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  133 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch_bpl.cpp:78:60:   required from here
-   78 |         scitbx::af::boost_python::shared_wrapper<w_t>::wrap(
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
-   79 |           "shared_batch");
-      |           ~~~~~~~~~~~~~~~                                   
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-g++ -o iotbx/xplor/boost_python/xplor_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/xplor/boost_python/xplor_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/libann_adaptor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libann_adaptor.so.0 annlib_adaptbx/ann/ann_adaptor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lann-cctbx
-g++ -o lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_boost_thread_test_ext.so.0 boost_adaptbx/tests/boost_thread_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /usr/include/boost/assert.hpp:58,
                  from /usr/include/boost/smart_ptr/shared_array.hpp:23,
                  from /usr/include/boost/shared_array.hpp:17,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/hendrickson_lattman.h:9,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:13:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<iotbx::mtz::crystal>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<iotbx::mtz::crystal>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<iotbx::mtz::dataset>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<iotbx::mtz::dataset>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = iotbx::mtz::crystal; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = iotbx::mtz::dataset; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; std::string = std::__cxx11::basic_string<char>]’
   130 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   131 |         w_t,
@@ -14319,154 +14382,54 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   133 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal_bpl.cpp:42:60:   required from here
-   42 |         scitbx::af::boost_python::shared_wrapper<w_t>::wrap(
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset_bpl.cpp:43:60:   required from here
+   43 |         scitbx::af::boost_python::shared_wrapper<w_t>::wrap(
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
-   43 |           "shared_crystal");
+   44 |           "shared_dataset");
       |           ~~~~~~~~~~~~~~~~~                                 
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_breadth_first_search_ext.so.0 boost_adaptbx/graph/breadth_first_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/libann_adaptor.so.0.0.1'
-    'lib/libann_adaptor.so.0'->'lib/libann_adaptor.so.0.0.1'
-    'lib/libann_adaptor.so'->'lib/libann_adaptor.so.0.0.1'
-g++ -o lib/annlib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=annlib_ext.so.0 annlib_adaptbx/ann/boost_python/annlib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lann-cctbx -lann_adaptor -lboost_thread -lboost_system -lboost_python313 -lm
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rot_mx.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/rt_mx.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tr_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/space_group.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/crystal.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/dataset.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/batch.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object_bpl.cpp:9:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’
-  591 |         IOTBX_ASSERT(iref[0] < oldsize);
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’
-  594 |           IOTBX_ASSERT(iref[i] < oldsize);
-      |           ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp: In destructor ‘iotbx::pdb::write_utils::fstream_open_close::~fstream_open_close()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp:42:7: warning: ‘throw’ will always call ‘terminate’ [-Wterminate]
+   42 |       throw std::runtime_error(
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
+   43 |         "Failure writing to file: \"" + file_name + "\"");
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/write_utils.cpp:42:7: note: in C++11 destructors default to ‘noexcept’
 Create symlinks for: 'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1'
     'lib/boost_adaptbx_boost_thread_test_ext.so.0'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1'
     'lib/boost_adaptbx_boost_thread_test_ext.so'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1'
+g++ -o lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_breadth_first_search_ext.so.0 boost_adaptbx/graph/breadth_first_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/annlib_ext.so.0.0.1'
     'lib/annlib_ext.so.0'->'lib/annlib_ext.so.0.0.1'
     'lib/annlib_ext.so'->'lib/annlib_ext.so.0.0.1'
-Create symlinks for: 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_breadth_first_search_ext.so'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1'
-g++ -o lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_clustering_algorithm_ext.so.0 boost_adaptbx/graph/clustering_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_connected_component_algorithm_ext.so.0 boost_adaptbx/graph/connected_component_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/boost_adaptbx_graph_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_ext.so.0 boost_adaptbx/graph/graph_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_clustering_algorithm_ext.so'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1'
-g++ -o lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_graph_structure_comparison_ext.so.0 boost_adaptbx/graph/graph_structure_comparison_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_maximum_clique_ext.so.0 boost_adaptbx/graph/maximum_clique_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:2:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
+g++ -o lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_clustering_algorithm_ext.so.0 boost_adaptbx/graph/clustering_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_connected_component_algorithm_ext.so.0 boost_adaptbx/graph/connected_component_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/boost_adaptbx_graph_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_ext.so.0 boost_adaptbx/graph/graph_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_breadth_first_search_ext.so'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1'
+g++ -o lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_graph_structure_comparison_ext.so.0 boost_adaptbx/graph/graph_structure_comparison_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1'
     'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1'
     'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1'
+g++ -o lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_maximum_clique_ext.so.0 boost_adaptbx/graph/maximum_clique_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/boost_adaptbx_graph_metric_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_metric_ext.so.0 boost_adaptbx/graph/metric_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_clustering_algorithm_ext.so'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1'
+g++ -o lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_min_cut_max_flow_ext.so.0 boost_adaptbx/graph/min_cut_max_flow_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1'
     'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1'
     'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1'
-g++ -o lib/boost_adaptbx_graph_metric_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_metric_ext.so.0 boost_adaptbx/graph/metric_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_min_cut_max_flow_ext.so.0 boost_adaptbx/graph/min_cut_max_flow_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/boost_adaptbx_graph_utility_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_utility_ext.so.0 boost_adaptbx/graph/utility_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_python_streambuf_test_ext.so.0 boost_adaptbx/tests/python_streambuf_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
-Create symlinks for: 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1'
-g++ -o lib/boost_optional_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_optional_ext.so.0 boost_adaptbx/optional_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
-g++ -o lib/boost_python_hybrid_times_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_hybrid_times_ext.so.0 boost_adaptbx/hybrid_times_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/boost_adaptbx_graph_metric_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_metric_ext.so.0'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_metric_ext.so'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1'
-Create symlinks for: 'lib/boost_adaptbx_graph_utility_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_utility_ext.so.0'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_utility_ext.so'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1'
-g++ -o lib/boost_python_meta_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_meta_ext.so.0 boost_adaptbx/meta_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
-g++ -o lib/boost_rational_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_rational_ext.so.0 boost_adaptbx/rational_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1'
-    'lib/boost_adaptbx_python_streambuf_test_ext.so.0'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1'
-    'lib/boost_adaptbx_python_streambuf_test_ext.so'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1'
-g++ -o lib/boost_tuple_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_tuple_ext.so.0 boost_adaptbx/tuple_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
-g++ -o lib/cbflib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cbflib_ext.so.0 cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lcbf-private -lcbf -lboost_thread -lboost_system -lboost_python313 -lm -lhdf5
-Create symlinks for: 'lib/boost_adaptbx_graph_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_ext.so.0'->'lib/boost_adaptbx_graph_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_ext.so'->'lib/boost_adaptbx_graph_ext.so.0.0.1'
-Create symlinks for: 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_maximum_clique_ext.so.0'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1'
-    'lib/boost_adaptbx_graph_maximum_clique_ext.so'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1'
-Create symlinks for: 'lib/boost_rational_ext.so.0.0.1'
-    'lib/boost_rational_ext.so.0'->'lib/boost_rational_ext.so.0.0.1'
-    'lib/boost_rational_ext.so'->'lib/boost_rational_ext.so.0.0.1'
-g++ -o lib/libccp4io.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libccp4io.so.0 ccp4io_adaptbx/fortran_call_stubs.o ccp4io_adaptbx/printf_wrappers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lm -lccp4c
-Create symlinks for: 'lib/boost_tuple_ext.so.0.0.1'
-    'lib/boost_tuple_ext.so.0'->'lib/boost_tuple_ext.so.0.0.1'
-    'lib/boost_tuple_ext.so'->'lib/boost_tuple_ext.so.0.0.1'
-Create symlinks for: 'lib/boost_python_hybrid_times_ext.so.0.0.1'
-    'lib/boost_python_hybrid_times_ext.so.0'->'lib/boost_python_hybrid_times_ext.so.0.0.1'
-    'lib/boost_python_hybrid_times_ext.so'->'lib/boost_python_hybrid_times_ext.so.0.0.1'
-Create symlinks for: 'lib/boost_optional_ext.so.0.0.1'
-    'lib/boost_optional_ext.so.0'->'lib/boost_optional_ext.so.0.0.1'
-    'lib/boost_optional_ext.so'->'lib/boost_optional_ext.so.0.0.1'
-Create symlinks for: 'lib/boost_python_meta_ext.so.0.0.1'
-    'lib/boost_python_meta_ext.so.0'->'lib/boost_python_meta_ext.so.0.0.1'
-    'lib/boost_python_meta_ext.so'->'lib/boost_python_meta_ext.so.0.0.1'
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_ext.cpp:11:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
-  157 |   std::auto_ptr<atom_tmp_sentinel>
-      |        ^~~~~~~~
-In file included from /usr/include/c++/14/memory:78,
-                 from /usr/include/boost/config/no_tr1/memory.hpp:21,
-                 from /usr/include/boost/get_pointer.hpp:14,
-                 from /usr/include/boost/python/object/pointer_holder.hpp:11,
-                 from /usr/include/boost/python/to_python_indirect.hpp:10,
-                 from /usr/include/boost/python/converter/arg_to_python.hpp:10,
-                 from /usr/include/boost/python/call.hpp:15,
-                 from /usr/include/boost/python/object_core.hpp:14,
-                 from /usr/include/boost/python/object/class.hpp:9,
-                 from /usr/include/boost/python/class.hpp:13,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_ext.cpp:4:
-/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
-   59 |   template<typename> class auto_ptr;
-      |                            ^~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
-  163 |   std::auto_ptr<atom_tmp_sentinel>
-      |        ^~~~~~~~
-/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
-   59 |   template<typename> class auto_ptr;
-      |                            ^~~~~~~~
-Create symlinks for: 'lib/libccp4io.so.0.0.1'
-    'lib/libccp4io.so.0'->'lib/libccp4io.so.0.0.1'
-    'lib/libccp4io.so'->'lib/libccp4io.so.0.0.1'
-g++ -o scitbx/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/utils.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/cbflib_ext.so.0.0.1'
-    'lib/cbflib_ext.so.0'->'lib/cbflib_ext.so.0.0.1'
-    'lib/cbflib_ext.so'->'lib/cbflib_ext.so.0.0.1'
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:13:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
@@ -14490,8 +14453,6 @@
 /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
    59 |   template<typename> class auto_ptr;
       |                            ^~~~~~~~
-g++ -o lib/ccp4io_adaptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=ccp4io_adaptbx_ext.so.0 ccp4io_adaptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lccp4io -lccp4c -lssm -lmmdb2 -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/boost_python/slice.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/slice.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp: In function ‘void iotbx::pdb::hierarchy::atoms::bpl_wrap()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:84:17: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
    84 |            std::auto_ptr<atom_tmp_sentinel>,
@@ -14499,9 +14460,30 @@
 /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
    59 |   template<typename> class auto_ptr;
       |                            ^~~~~~~~
-g++ -o scitbx/array_family/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/utils.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_ext.cpp:11:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
+  157 |   std::auto_ptr<atom_tmp_sentinel>
+      |        ^~~~~~~~
+In file included from /usr/include/c++/14/memory:78,
+                 from /usr/include/boost/config/no_tr1/memory.hpp:21,
+                 from /usr/include/boost/get_pointer.hpp:14,
+                 from /usr/include/boost/python/object/pointer_holder.hpp:11,
+                 from /usr/include/boost/python/to_python_indirect.hpp:10,
+                 from /usr/include/boost/python/converter/arg_to_python.hpp:10,
+                 from /usr/include/boost/python/call.hpp:15,
+                 from /usr/include/boost/python/object_core.hpp:14,
+                 from /usr/include/boost/python/object/class.hpp:9,
+                 from /usr/include/boost/python/class.hpp:13,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_ext.cpp:4:
+/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
+   59 |   template<typename> class auto_ptr;
+      |                            ^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
+  163 |   std::auto_ptr<atom_tmp_sentinel>
+      |        ^~~~~~~~
+/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
+   59 |   template<typename> class auto_ptr;
+      |                            ^~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -14523,15 +14505,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-g++ -o lib/cma_es_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cma_es_ext.so.0 cma_es/cma_es_ext.o cma_es/cma/cmaes.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_ext.so.0 dxtbx/src/dxtbx/boost_python/ext.o dxtbx/src/dxtbx/boost_python/compression.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf
-g++ -o lib/dxtbx_format_nexus_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_nexus_ext.so.0 dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5
-Create symlinks for: 'lib/ccp4io_adaptbx_ext.so.0.0.1'
-    'lib/ccp4io_adaptbx_ext.so.0'->'lib/ccp4io_adaptbx_ext.so.0.0.1'
-    'lib/ccp4io_adaptbx_ext.so'->'lib/ccp4io_adaptbx_ext.so.0.0.1'
-g++ -o lib/fable_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=fable_ext.so.0 fable/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o ucif/cifParser.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ucif/cifParser.cpp
-g++ -o ucif/cifLexer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ucif/cifLexer.cpp
+Create symlinks for: 'lib/boost_adaptbx_graph_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_ext.so.0'->'lib/boost_adaptbx_graph_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_ext.so'->'lib/boost_adaptbx_graph_ext.so.0.0.1'
 In file included from /usr/include/boost/assert.hpp:58,
                  from /usr/include/boost/function/function_base.hpp:28,
                  from /usr/include/boost/function/detail/prologue.hpp:18,
@@ -14566,8 +14542,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_maximum_clique_ext.so.0'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_maximum_clique_ext.so'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1'
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<iotbx::pdb::hierarchy::atom_with_labels>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<iotbx::pdb::hierarchy::atom_with_labels>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
@@ -14587,51 +14564,92 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+g++ -o lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_python_streambuf_test_ext.so.0 boost_adaptbx/tests/python_streambuf_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
+Create symlinks for: 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1'
+Create symlinks for: 'lib/boost_adaptbx_graph_metric_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_metric_ext.so.0'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_metric_ext.so'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1'
+g++ -o lib/boost_optional_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_optional_ext.so.0 boost_adaptbx/optional_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
+Create symlinks for: 'lib/boost_adaptbx_graph_utility_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_utility_ext.so.0'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1'
+    'lib/boost_adaptbx_graph_utility_ext.so'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1'
+g++ -o lib/boost_python_hybrid_times_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_hybrid_times_ext.so.0 boost_adaptbx/hybrid_times_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/boost_python_meta_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_meta_ext.so.0 boost_adaptbx/meta_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
+g++ -o lib/boost_rational_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_rational_ext.so.0 boost_adaptbx/rational_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1'
+    'lib/boost_adaptbx_python_streambuf_test_ext.so.0'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1'
+    'lib/boost_adaptbx_python_streambuf_test_ext.so'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1'
+g++ -o lib/boost_tuple_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_tuple_ext.so.0 boost_adaptbx/tuple_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
+g++ -o lib/cbflib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cbflib_ext.so.0 cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lcbf-private -lcbf -lboost_thread -lboost_system -lboost_python313 -lm -lhdf5
+Create symlinks for: 'lib/boost_optional_ext.so.0.0.1'
+    'lib/boost_optional_ext.so.0'->'lib/boost_optional_ext.so.0.0.1'
+    'lib/boost_optional_ext.so'->'lib/boost_optional_ext.so.0.0.1'
+g++ -o lib/libccp4io.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libccp4io.so.0 ccp4io_adaptbx/fortran_call_stubs.o ccp4io_adaptbx/printf_wrappers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lm -lccp4c
+Create symlinks for: 'lib/boost_python_hybrid_times_ext.so.0.0.1'
+    'lib/boost_python_hybrid_times_ext.so.0'->'lib/boost_python_hybrid_times_ext.so.0.0.1'
+    'lib/boost_python_hybrid_times_ext.so'->'lib/boost_python_hybrid_times_ext.so.0.0.1'
+Create symlinks for: 'lib/boost_tuple_ext.so.0.0.1'
+    'lib/boost_tuple_ext.so.0'->'lib/boost_tuple_ext.so.0.0.1'
+    'lib/boost_tuple_ext.so'->'lib/boost_tuple_ext.so.0.0.1'
+Create symlinks for: 'lib/boost_rational_ext.so.0.0.1'
+    'lib/boost_rational_ext.so.0'->'lib/boost_rational_ext.so.0.0.1'
+    'lib/boost_rational_ext.so'->'lib/boost_rational_ext.so.0.0.1'
+g++ -o scitbx/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/utils.cpp
+Create symlinks for: 'lib/libccp4io.so.0.0.1'
+    'lib/libccp4io.so.0'->'lib/libccp4io.so.0.0.1'
+    'lib/libccp4io.so'->'lib/libccp4io.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/boost_python/slice.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/slice.cpp
+g++ -o lib/ccp4io_adaptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=ccp4io_adaptbx_ext.so.0 ccp4io_adaptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lccp4io -lccp4c -lssm -lmmdb2 -lboost_thread -lboost_system -lboost_python313 -lm
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/utils.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/boost_python_meta_ext.so.0.0.1'
+    'lib/boost_python_meta_ext.so.0'->'lib/boost_python_meta_ext.so.0.0.1'
+    'lib/boost_python_meta_ext.so'->'lib/boost_python_meta_ext.so.0.0.1'
+Create symlinks for: 'lib/cbflib_ext.so.0.0.1'
+    'lib/cbflib_ext.so.0'->'lib/cbflib_ext.so.0.0.1'
+    'lib/cbflib_ext.so'->'lib/cbflib_ext.so.0.0.1'
+Create symlinks for: 'lib/ccp4io_adaptbx_ext.so.0.0.1'
+    'lib/ccp4io_adaptbx_ext.so.0'->'lib/ccp4io_adaptbx_ext.so.0.0.1'
+    'lib/ccp4io_adaptbx_ext.so'->'lib/ccp4io_adaptbx_ext.so.0.0.1'
+g++ -o lib/cma_es_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cma_es_ext.so.0 cma_es/cma_es_ext.o cma_es/cma/cmaes.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_ext.so.0 dxtbx/src/dxtbx/boost_python/ext.o dxtbx/src/dxtbx/boost_python/compression.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf
+g++ -o lib/dxtbx_format_nexus_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_nexus_ext.so.0 dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5
+g++ -o lib/fable_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=fable_ext.so.0 fable/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/cma_es_ext.so.0.0.1'
     'lib/cma_es_ext.so.0'->'lib/cma_es_ext.so.0.0.1'
     'lib/cma_es_ext.so'->'lib/cma_es_ext.so.0.0.1'
-g++ -o lib/iotbx_detectors_bruker_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_bruker_ext.so.0 iotbx/detectors/bruker_ext.o iotbx/detectors/bruker.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/fable_ext.so.0.0.1'
-    'lib/fable_ext.so.0'->'lib/fable_ext.so.0.0.1'
-    'lib/fable_ext.so'->'lib/fable_ext.so.0.0.1'
+g++ -o lib/iotbx_ccp4_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_ccp4_map_ext.so.0 iotbx/ccp4_map/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lccp4c -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/dxtbx_ext.so.0.0.1'
+    'lib/dxtbx_ext.so.0'->'lib/dxtbx_ext.so.0.0.1'
+    'lib/dxtbx_ext.so'->'lib/dxtbx_ext.so.0.0.1'
 Create symlinks for: 'lib/dxtbx_format_nexus_ext.so.0.0.1'
     'lib/dxtbx_format_nexus_ext.so.0'->'lib/dxtbx_format_nexus_ext.so.0.0.1'
     'lib/dxtbx_format_nexus_ext.so'->'lib/dxtbx_format_nexus_ext.so.0.0.1'
+g++ -o ucif/cifParser.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ucif/cifParser.cpp
+Create symlinks for: 'lib/fable_ext.so.0.0.1'
+    'lib/fable_ext.so.0'->'lib/fable_ext.so.0.0.1'
+    'lib/fable_ext.so'->'lib/fable_ext.so.0.0.1'
+g++ -o ucif/cifLexer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/ucif/cifLexer.cpp
+g++ -o lib/iotbx_detectors_bruker_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_bruker_ext.so.0 iotbx/detectors/bruker_ext.o iotbx/detectors/bruker.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/iotbx_dsn6_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dsn6_map_ext.so.0 iotbx/dsn6/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/dxtbx_ext.so.0.0.1'
-    'lib/dxtbx_ext.so.0'->'lib/dxtbx_ext.so.0.0.1'
-    'lib/dxtbx_ext.so'->'lib/dxtbx_ext.so.0.0.1'
+g++ -o iotbx/pdb/hybrid_36_fem -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread iotbx/pdb/hybrid_36_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+Create symlinks for: 'lib/iotbx_ccp4_map_ext.so.0.0.1'
+    'lib/iotbx_ccp4_map_ext.so.0'->'lib/iotbx_ccp4_map_ext.so.0.0.1'
+    'lib/iotbx_ccp4_map_ext.so'->'lib/iotbx_ccp4_map_ext.so.0.0.1'
 g++ -o lib/iotbx_dtrek_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dtrek_ext.so.0 iotbx/misc/boost_python/dtrek_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/libiotbx_mtz.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_mtz.so.0 iotbx/mtz/object.o iotbx/mtz/crystal.o iotbx/mtz/dataset.o iotbx/mtz/column.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lccp4io -lccp4c -lm -lboost_thread -lboost_system
 Create symlinks for: 'lib/iotbx_dsn6_map_ext.so.0.0.1'
     'lib/iotbx_dsn6_map_ext.so.0'->'lib/iotbx_dsn6_map_ext.so.0.0.1'
     'lib/iotbx_dsn6_map_ext.so'->'lib/iotbx_dsn6_map_ext.so.0.0.1'
-Create symlinks for: 'lib/iotbx_dtrek_ext.so.0.0.1'
-    'lib/iotbx_dtrek_ext.so.0'->'lib/iotbx_dtrek_ext.so.0.0.1'
-    'lib/iotbx_dtrek_ext.so'->'lib/iotbx_dtrek_ext.so.0.0.1'
 g++ -o lib/iotbx_scalepack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_scalepack_ext.so.0 iotbx/misc/boost_python/scalepack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/iotbx_detectors_bruker_ext.so.0.0.1'
     'lib/iotbx_detectors_bruker_ext.so.0'->'lib/iotbx_detectors_bruker_ext.so.0.0.1'
     'lib/iotbx_detectors_bruker_ext.so'->'lib/iotbx_detectors_bruker_ext.so.0.0.1'
-g++ -o spotfinder/dxtbx_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/dxtbx_toolbox/libdistl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o iotbx/pdb/hybrid_36_fem -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread iotbx/pdb/hybrid_36_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-Create symlinks for: 'lib/libiotbx_mtz.so.0.0.1'
-    'lib/libiotbx_mtz.so.0'->'lib/libiotbx_mtz.so.0.0.1'
-    'lib/libiotbx_mtz.so'->'lib/libiotbx_mtz.so.0.0.1'
-g++ -o spotfinder/dxtbx_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/dxtbx_toolbox/distl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/iotbx_scalepack_ext.so.0.0.1'
-    'lib/iotbx_scalepack_ext.so.0'->'lib/iotbx_scalepack_ext.so.0.0.1'
-    'lib/iotbx_scalepack_ext.so'->'lib/iotbx_scalepack_ext.so.0.0.1'
-g++ -o spotfinder/core_toolbox/spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/spot.cpp
-g++ -o spotfinder/core_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/libdistl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o spotfinder/core_toolbox/hough.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/hough.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o spotfinder/core_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/distl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -14666,8 +14684,11 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o spotfinder/core_toolbox/spotfilter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/spotfilter.cpp
+g++ -o spotfinder/dxtbx_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/dxtbx_toolbox/libdistl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/iotbx_dtrek_ext.so.0.0.1'
+    'lib/iotbx_dtrek_ext.so.0'->'lib/iotbx_dtrek_ext.so.0.0.1'
+    'lib/iotbx_dtrek_ext.so'->'lib/iotbx_dtrek_ext.so.0.0.1'
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -14694,6 +14715,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o spotfinder/dxtbx_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/dxtbx_toolbox/distl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -14720,6 +14743,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+Create symlinks for: 'lib/iotbx_scalepack_ext.so.0.0.1'
+    'lib/iotbx_scalepack_ext.so.0'->'lib/iotbx_scalepack_ext.so.0.0.1'
+    'lib/iotbx_scalepack_ext.so'->'lib/iotbx_scalepack_ext.so.0.0.1'
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -14746,42 +14772,18 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o lib/iotbx_ccp4_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_ccp4_map_ext.so.0 iotbx/ccp4_map/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lccp4c -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/iotbx_ccp4_map_ext.so.0.0.1'
-    'lib/iotbx_ccp4_map_ext.so.0'->'lib/iotbx_ccp4_map_ext.so.0.0.1'
-    'lib/iotbx_ccp4_map_ext.so'->'lib/iotbx_ccp4_map_ext.so.0.0.1'
-g++ -o mmtbx/masks/atom_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/masks/atom_mask.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/tls/decompose.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/decompose.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o rstbx/dps_core/dps_core.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/dps_core.cpp
+g++ -o spotfinder/core_toolbox/spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/spot.cpp
+g++ -o spotfinder/core_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/libdistl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o rstbx/dps_core/directional_fft.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/directional_fft.cpp
+g++ -o spotfinder/core_toolbox/hough.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/hough.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o rstbx/dps_core/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/direction.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/iotbx_cif_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_cif_ext.so.0 iotbx/cif/boost_python/cif_ext.o ucif/cifParser.o ucif/cifLexer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lantlr3c
-Create symlinks for: 'lib/iotbx_cif_ext.so.0.0.1'
-    'lib/iotbx_cif_ext.so.0'->'lib/iotbx_cif_ext.so.0.0.1'
-    'lib/iotbx_cif_ext.so'->'lib/iotbx_cif_ext.so.0.0.1'
-g++ -o rstbx/indexing_api/indexing_api.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/indexing_api.cpp
+g++ -o lib/libiotbx_mtz.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_mtz.so.0 iotbx/mtz/object.o iotbx/mtz/crystal.o iotbx/mtz/dataset.o iotbx/mtz/column.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lccp4io -lccp4c -lm -lboost_thread -lboost_system
+g++ -o spotfinder/core_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/distl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/iotbx_wildcard_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_wildcard_ext.so.0 iotbx/wildcard_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/iotbx_wildcard_ext.so.0.0.1'
-    'lib/iotbx_wildcard_ext.so.0'->'lib/iotbx_wildcard_ext.so.0.0.1'
-    'lib/iotbx_wildcard_ext.so'->'lib/iotbx_wildcard_ext.so.0.0.1'
-g++ -o rstbx/diffraction/ewald_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/ewald_sphere.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o rstbx/diffraction/partial_spot_position_partial_H.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/partial_spot_position_partial_H.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/dxtbx_format_image_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_image_ext.so.0 dxtbx/src/dxtbx/format/boost_python/image_ext.o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5
-g++ -o scitbx/minpack/raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/minpack/raw.cpp
+g++ -o spotfinder/core_toolbox/spotfilter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/spotfilter.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-gcc -o scitbx/slatec/lib_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/slatec/lib_c.c
-Create symlinks for: 'lib/dxtbx_format_image_ext.so.0.0.1'
-    'lib/dxtbx_format_image_ext.so.0'->'lib/dxtbx_format_image_ext.so.0.0.1'
-    'lib/dxtbx_format_image_ext.so'->'lib/dxtbx_format_image_ext.so.0.0.1'
-g++ -o smtbx/refinement/constraints/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/affine.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/xray_structure.h:6,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/pdb/xray_structure_bpl.cpp:7:
@@ -14789,9 +14791,16 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
+Create symlinks for: 'lib/libiotbx_mtz.so.0.0.1'
+    'lib/libiotbx_mtz.so.0'->'lib/libiotbx_mtz.so.0.0.1'
+    'lib/libiotbx_mtz.so'->'lib/libiotbx_mtz.so.0.0.1'
+g++ -o mmtbx/masks/atom_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/masks/atom_mask.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o mmtbx/tls/decompose.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/decompose.cpp
+Create symlinks for: 'lib/iotbx_wildcard_ext.so.0.0.1'
+    'lib/iotbx_wildcard_ext.so.0'->'lib/iotbx_wildcard_ext.so.0.0.1'
+    'lib/iotbx_wildcard_ext.so'->'lib/iotbx_wildcard_ext.so.0.0.1'
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/libscitbx_boost_python.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -shared -rdynamic -std=c++14 -Wl,-soname=libscitbx_boost_python.so.0 scitbx/boost_python/utils.o scitbx/boost_python/slice.o scitbx/array_family/boost_python/utils.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313
-g++ -o lib/libscitbx_slatec.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_slatec.so.0 scitbx/slatec/lib_c.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lm
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -14813,234 +14822,306 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
+g++ -o rstbx/dps_core/dps_core.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/dps_core.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/iotbx_cif_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_cif_ext.so.0 iotbx/cif/boost_python/cif_ext.o ucif/cifParser.o ucif/cifLexer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lantlr3c
+Create symlinks for: 'lib/iotbx_cif_ext.so.0.0.1'
+    'lib/iotbx_cif_ext.so.0'->'lib/iotbx_cif_ext.so.0.0.1'
+    'lib/iotbx_cif_ext.so'->'lib/iotbx_cif_ext.so.0.0.1'
+g++ -o rstbx/dps_core/directional_fft.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/directional_fft.cpp
+g++ -o rstbx/dps_core/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/direction.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o rstbx/indexing_api/indexing_api.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/indexing_api.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/dxtbx_format_image_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_image_ext.so.0 dxtbx/src/dxtbx/format/boost_python/image_ext.o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5
+g++ -o rstbx/diffraction/partial_spot_position_partial_H.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/partial_spot_position_partial_H.cpp
+g++ -o rstbx/diffraction/ewald_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/ewald_sphere.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/minpack/raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/minpack/raw.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/libscitbx_boost_python.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -shared -rdynamic -std=c++14 -Wl,-soname=libscitbx_boost_python.so.0 scitbx/boost_python/utils.o scitbx/boost_python/slice.o scitbx/array_family/boost_python/utils.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313
+Create symlinks for: 'lib/dxtbx_format_image_ext.so.0.0.1'
+    'lib/dxtbx_format_image_ext.so.0'->'lib/dxtbx_format_image_ext.so.0.0.1'
+    'lib/dxtbx_format_image_ext.so'->'lib/dxtbx_format_image_ext.so.0.0.1'
+gcc -o scitbx/slatec/lib_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/slatec/lib_c.c
+g++ -o smtbx/refinement/constraints/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/affine.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/libscitbx_boost_python.so.0.0.1'
     'lib/libscitbx_boost_python.so.0'->'lib/libscitbx_boost_python.so.0.0.1'
     'lib/libscitbx_boost_python.so'->'lib/libscitbx_boost_python.so.0.0.1'
+g++ -o lib/cctbx_covariance_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_covariance_ext.so.0 cctbx/covariance/boost_python/covariance_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/libscitbx_slatec.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_slatec.so.0 scitbx/slatec/lib_c.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lm
+Create symlinks for: 'lib/cctbx_covariance_ext.so.0.0.1'
+    'lib/cctbx_covariance_ext.so.0'->'lib/cctbx_covariance_ext.so.0.0.1'
+    'lib/cctbx_covariance_ext.so'->'lib/cctbx_covariance_ext.so.0.0.1'
+g++ -o lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_attenuation_coefficient_ext.so.0 cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/libscitbx_slatec.so.0.0.1'
     'lib/libscitbx_slatec.so.0'->'lib/libscitbx_slatec.so.0.0.1'
     'lib/libscitbx_slatec.so'->'lib/libscitbx_slatec.so.0.0.1'
-g++ -o lib/gltbx_util_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_util_ext.so.0 gltbx/util_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
-g++ -o lib/cctbx_sgtbx_asu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_asu_ext.so.0 cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/dxtbx_flumpy.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_flumpy.so.0 dxtbx/src/dxtbx/boost_python/flumpy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5
+g++ -o lib/cctbx_asymmetric_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_asymmetric_map_ext.so.0 cctbx/maptbx/asymmetric_map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_eltbx_sasaki_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_sasaki_ext.so.0 cctbx/eltbx/boost_python/sasaki_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1'
+    'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1'
+    'lib/cctbx_eltbx_attenuation_coefficient_ext.so'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_eltbx_sasaki_ext.so.0.0.1'
+    'lib/cctbx_eltbx_sasaki_ext.so.0'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1'
+    'lib/cctbx_eltbx_sasaki_ext.so'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1'
 g++ -o lib/cctbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_masks_ext.so.0 cctbx/masks/boost_python/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_chemical_elements_ext.so.0 cctbx/eltbx/boost_python/chemical_elements_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/gltbx_util_ext.so.0.0.1'
-    'lib/gltbx_util_ext.so.0'->'lib/gltbx_util_ext.so.0.0.1'
-    'lib/gltbx_util_ext.so'->'lib/gltbx_util_ext.so.0.0.1'
-g++ -o lib/determine_unit_cell_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=determine_unit_cell_ext.so.0 cctbx/uctbx/determine_unit_cell/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_asymmetric_map_ext.so.0.0.1'
+    'lib/cctbx_asymmetric_map_ext.so.0'->'lib/cctbx_asymmetric_map_ext.so.0.0.1'
+    'lib/cctbx_asymmetric_map_ext.so'->'lib/cctbx_asymmetric_map_ext.so.0.0.1'
+g++ -o lib/gltbx_glu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_glu_ext.so.0 gltbx/glu_ext.o gltbx/glu_defines_00_bpl.o gltbx/glu_defines_01_bpl.o gltbx/glu_functions_00_bpl.o gltbx/glu_functions_01_bpl.o gltbx/glu_functions_02_bpl.o gltbx/glu_functions_03_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
+g++ -o lib/gltbx_viewer_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_viewer_utils_ext.so.0 gltbx/viewer_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
 Create symlinks for: 'lib/cctbx_masks_ext.so.0.0.1'
     'lib/cctbx_masks_ext.so.0'->'lib/cctbx_masks_ext.so.0.0.1'
     'lib/cctbx_masks_ext.so'->'lib/cctbx_masks_ext.so.0.0.1'
 g++ -o lib/cctbx_merging_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_merging_ext.so.0 cctbx/merging/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1'
-    'lib/cctbx_eltbx_chemical_elements_ext.so.0'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1'
-    'lib/cctbx_eltbx_chemical_elements_ext.so'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1'
+Create symlinks for: 'lib/gltbx_viewer_utils_ext.so.0.0.1'
+    'lib/gltbx_viewer_utils_ext.so.0'->'lib/gltbx_viewer_utils_ext.so.0.0.1'
+    'lib/gltbx_viewer_utils_ext.so'->'lib/gltbx_viewer_utils_ext.so.0.0.1'
+g++ -o lib/gltbx_gl_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_gl_ext.so.0 gltbx/gl_ext.o gltbx/gl_defines_00_bpl.o gltbx/gl_defines_01_bpl.o gltbx/gl_defines_02_bpl.o gltbx/gl_defines_03_bpl.o gltbx/gl_defines_04_bpl.o gltbx/gl_defines_05_bpl.o gltbx/gl_defines_06_bpl.o gltbx/gl_defines_07_bpl.o gltbx/gl_functions_00_bpl.o gltbx/gl_functions_01_bpl.o gltbx/gl_functions_02_bpl.o gltbx/gl_functions_03_bpl.o gltbx/gl_functions_04_bpl.o gltbx/gl_functions_05_bpl.o gltbx/gl_functions_06_bpl.o gltbx/gl_functions_07_bpl.o gltbx/gl_functions_08_bpl.o gltbx/gl_functions_09_bpl.o gltbx/gl_functions_10_bpl.o gltbx/gl_functions_11_bpl.o gltbx/gl_functions_12_bpl.o gltbx/gl_functions_13_bpl.o gltbx/gl_functions_14_bpl.o gltbx/gl_functions_15_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
+Create symlinks for: 'lib/gltbx_glu_ext.so.0.0.1'
+    'lib/gltbx_glu_ext.so.0'->'lib/gltbx_glu_ext.so.0.0.1'
+    'lib/gltbx_glu_ext.so'->'lib/gltbx_glu_ext.so.0.0.1'
 g++ -o lib/cctbx_miller_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_miller_ext.so.0 cctbx/miller/boost_python/miller_ext.o cctbx/miller/boost_python/asu.o cctbx/miller/boost_python/bins.o cctbx/miller/boost_python/change_basis.o cctbx/miller/boost_python/expand_to_p1.o cctbx/miller/boost_python/index_generator.o cctbx/miller/boost_python/index_span.o cctbx/miller/boost_python/match_bijvoet_mates.o cctbx/miller/boost_python/match_indices.o cctbx/miller/boost_python/match_multi_indices.o cctbx/miller/boost_python/merge_equivalents.o cctbx/miller/boost_python/phase_integrator.o cctbx/miller/boost_python/phase_transfer.o cctbx/miller/boost_python/sym_equiv.o cctbx/miller/boost_python/f_calc_map.o cctbx/miller/boost_python/lookup_utils.o cctbx/miller/boost_python/amplitude_normalisation.o cctbx/miller/boost_python/randomize_amplitude_and_phase.o cctbx/miller/boost_python/slices.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/determine_unit_cell_ext.so.0.0.1'
-    'lib/determine_unit_cell_ext.so.0'->'lib/determine_unit_cell_ext.so.0.0.1'
-    'lib/determine_unit_cell_ext.so'->'lib/determine_unit_cell_ext.so.0.0.1'
-g++ -o lib/cctbx_eltbx_neutron_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_neutron_ext.so.0 cctbx/eltbx/boost_python/neutron_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_uctbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_uctbx_ext.so.0 cctbx/uctbx/boost_python/uctbx_ext.o cctbx/uctbx/boost_python/fast_minimum_reduction.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_sgtbx_asu_ext.so.0.0.1'
-    'lib/cctbx_sgtbx_asu_ext.so.0'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1'
-    'lib/cctbx_sgtbx_asu_ext.so'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1'
-Create symlinks for: 'lib/dxtbx_flumpy.so.0.0.1'
-    'lib/dxtbx_flumpy.so.0'->'lib/dxtbx_flumpy.so.0.0.1'
-    'lib/dxtbx_flumpy.so'->'lib/dxtbx_flumpy.so.0.0.1'
+g++ -o lib/cctbx_adptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adptbx_ext.so.0 cctbx/adptbx/boost_python/adptbx_ext.o cctbx/adptbx/boost_python/hirshfeld.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/dxtbx_flumpy.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_flumpy.so.0 dxtbx/src/dxtbx/boost_python/flumpy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5
 Create symlinks for: 'lib/cctbx_merging_ext.so.0.0.1'
     'lib/cctbx_merging_ext.so.0'->'lib/cctbx_merging_ext.so.0.0.1'
     'lib/cctbx_merging_ext.so'->'lib/cctbx_merging_ext.so.0.0.1'
-g++ -o lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_tiny_pse_ext.so.0 cctbx/eltbx/boost_python/tiny_pse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_adptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adptbx_ext.so.0 cctbx/adptbx/boost_python/adptbx_ext.o cctbx/adptbx/boost_python/hirshfeld.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_xray_scattering_ext.so.0 cctbx/eltbx/boost_python/xray_scattering_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_attenuation_coefficient_ext.so.0 cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_eltbx_neutron_ext.so.0.0.1'
-    'lib/cctbx_eltbx_neutron_ext.so.0'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1'
-    'lib/cctbx_eltbx_neutron_ext.so'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1'
-g++ -o lib/cctbx_eltbx_henke_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_henke_ext.so.0 cctbx/eltbx/boost_python/henke_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_uctbx_ext.so.0.0.1'
-    'lib/cctbx_uctbx_ext.so.0'->'lib/cctbx_uctbx_ext.so.0.0.1'
-    'lib/cctbx_uctbx_ext.so'->'lib/cctbx_uctbx_ext.so.0.0.1'
+g++ -o lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_fp_fdp_ext.so.0 cctbx/eltbx/boost_python/fp_fdp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/cctbx_geometry_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_restraints_ext.so.0 cctbx/geometry_restraints/geometry_restraints_ext.o cctbx/geometry_restraints/bond_bpl.o cctbx/geometry_restraints/bond_similarity_bpl.o cctbx/geometry_restraints/bond_sorted_bpl.o cctbx/geometry_restraints/nonbonded_bpl.o cctbx/geometry_restraints/nonbonded_sorted_bpl.o cctbx/geometry_restraints/angle_bpl.o cctbx/geometry_restraints/dihedral_bpl.o cctbx/geometry_restraints/chirality_bpl.o cctbx/geometry_restraints/planarity_bpl.o cctbx/geometry_restraints/parallelity_bpl.o cctbx/geometry_restraints/motif_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1'
-    'lib/cctbx_eltbx_tiny_pse_ext.so.0'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1'
-    'lib/cctbx_eltbx_tiny_pse_ext.so'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1'
 g++ -o lib/cctbx_xray_observations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_observations_ext.so.0 cctbx/xray/observations/boost_python/observations.o cctbx/xray/observations/boost_python/observations_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_eltbx_henke_ext.so.0.0.1'
-    'lib/cctbx_eltbx_henke_ext.so.0'->'lib/cctbx_eltbx_henke_ext.so.0.0.1'
-    'lib/cctbx_eltbx_henke_ext.so'->'lib/cctbx_eltbx_henke_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1'
+    'lib/cctbx_eltbx_fp_fdp_ext.so.0'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1'
+    'lib/cctbx_eltbx_fp_fdp_ext.so'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1'
 g++ -o lib/cctbx_crystal_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_crystal_ext.so.0 cctbx/crystal/crystal_ext.o cctbx/crystal/asu_clusters_bpl.o cctbx/crystal/close_packing_bpl.o cctbx/crystal/coordination_sequences_bpl.o cctbx/crystal/direct_space_asu_bpl.o cctbx/crystal/incremental_pairs_bpl.o cctbx/crystal/neighbors_bpl.o cctbx/crystal/pair_tables_bpl.o cctbx/crystal/site_cluster_analysis_bpl.o cctbx/crystal/symmetry_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1'
-    'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1'
-    'lib/cctbx_eltbx_attenuation_coefficient_ext.so'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1'
-g++ -o lib/cctbx_statistics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_statistics_ext.so.0 cctbx/boost_python/statistics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/libscitbx_minpack.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_minpack.so.0 scitbx/minpack/raw.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lm
+g++ -o lib/gltbx_fonts_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_fonts_ext.so.0 gltbx/fonts_ext.o gltbx/font_ucs_8x13.o gltbx/font_ucs_9x15.o gltbx/font_ucs_10x20.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
+Create symlinks for: 'lib/gltbx_gl_ext.so.0.0.1'
+    'lib/gltbx_gl_ext.so.0'->'lib/gltbx_gl_ext.so.0.0.1'
+    'lib/gltbx_gl_ext.so'->'lib/gltbx_gl_ext.so.0.0.1'
 Create symlinks for: 'lib/cctbx_adptbx_ext.so.0.0.1'
     'lib/cctbx_adptbx_ext.so.0'->'lib/cctbx_adptbx_ext.so.0.0.1'
     'lib/cctbx_adptbx_ext.so'->'lib/cctbx_adptbx_ext.so.0.0.1'
-g++ -o lib/cctbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_math_ext.so.0 cctbx/math/boost_python/math_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_statistics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_statistics_ext.so.0 cctbx/boost_python/statistics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_eltbx_wavelengths_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_wavelengths_ext.so.0 cctbx/eltbx/boost_python/wavelengths_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_orientation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_orientation_ext.so.0 cctbx/boost_python/orientation_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/libscitbx_minpack.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_minpack.so.0 scitbx/minpack/raw.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lm
+Create symlinks for: 'lib/gltbx_fonts_ext.so.0.0.1'
+    'lib/gltbx_fonts_ext.so.0'->'lib/gltbx_fonts_ext.so.0.0.1'
+    'lib/gltbx_fonts_ext.so'->'lib/gltbx_fonts_ext.so.0.0.1'
+g++ -o lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_covalent_radii_ext.so.0 cctbx/eltbx/boost_python/covalent_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_xray_observations_ext.so.0.0.1'
+    'lib/cctbx_xray_observations_ext.so.0'->'lib/cctbx_xray_observations_ext.so.0.0.1'
+    'lib/cctbx_xray_observations_ext.so'->'lib/cctbx_xray_observations_ext.so.0.0.1'
+g++ -o lib/cctbx_adp_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adp_restraints_ext.so.0 cctbx/adp_restraints/adp_restraints_bpl.o cctbx/adp_restraints/adp_restraints_ext.o cctbx/adp_restraints/rigid_bond_bpl.o cctbx/adp_restraints/rigu_bpl.o cctbx/adp_restraints/adp_similarity_bpl.o cctbx/adp_restraints/isotropic_adp_bpl.o cctbx/adp_restraints/aniso_restraints_bpl.o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/dxtbx_flumpy.so.0.0.1'
+    'lib/dxtbx_flumpy.so.0'->'lib/dxtbx_flumpy.so.0.0.1'
+    'lib/dxtbx_flumpy.so'->'lib/dxtbx_flumpy.so.0.0.1'
 Create symlinks for: 'lib/cctbx_statistics_ext.so.0.0.1'
     'lib/cctbx_statistics_ext.so.0'->'lib/cctbx_statistics_ext.so.0.0.1'
     'lib/cctbx_statistics_ext.so'->'lib/cctbx_statistics_ext.so.0.0.1'
-g++ -o lib/gltbx_fonts_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_fonts_ext.so.0 gltbx/fonts_ext.o gltbx/font_ucs_8x13.o gltbx/font_ucs_9x15.o gltbx/font_ucs_10x20.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
+g++ -o lib/cctbx_multipolar_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_multipolar_ext.so.0 cctbx/multipolar/aspherical_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_eltbx_henke_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_henke_ext.so.0 cctbx/eltbx/boost_python/henke_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/libscitbx_minpack.so.0.0.1'
     'lib/libscitbx_minpack.so.0'->'lib/libscitbx_minpack.so.0.0.1'
     'lib/libscitbx_minpack.so'->'lib/libscitbx_minpack.so.0.0.1'
-g++ -o lib/cctbx_orientation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_orientation_ext.so.0 cctbx/boost_python/orientation_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1'
-    'lib/cctbx_eltbx_xray_scattering_ext.so.0'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1'
-    'lib/cctbx_eltbx_xray_scattering_ext.so'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1'
-g++ -o lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_fp_fdp_ext.so.0 cctbx/eltbx/boost_python/fp_fdp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_xray_observations_ext.so.0.0.1'
-    'lib/cctbx_xray_observations_ext.so.0'->'lib/cctbx_xray_observations_ext.so.0.0.1'
-    'lib/cctbx_xray_observations_ext.so'->'lib/cctbx_xray_observations_ext.so.0.0.1'
-g++ -o lib/cctbx_asymmetric_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_asymmetric_map_ext.so.0 cctbx/maptbx/asymmetric_map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_math_ext.so.0.0.1'
-    'lib/cctbx_math_ext.so.0'->'lib/cctbx_math_ext.so.0.0.1'
-    'lib/cctbx_math_ext.so'->'lib/cctbx_math_ext.so.0.0.1'
-g++ -o lib/cctbx_xray_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_ext.so.0 cctbx/xray/boost_python/xray_ext.o cctbx/xray/boost_python/conversions.o cctbx/xray/boost_python/gradient_flags.o cctbx/xray/boost_python/gradients_direct.o cctbx/xray/boost_python/each_hkl_gradients_direct.o cctbx/xray/boost_python/fast_gradients.o cctbx/xray/boost_python/minimization.o cctbx/xray/boost_python/scatterer_flags.o cctbx/xray/boost_python/scatterer.o cctbx/xray/boost_python/scattering_type_registry.o cctbx/xray/boost_python/sampling_base.o cctbx/xray/boost_python/sampled_model_density.o cctbx/xray/boost_python/structure_factors_direct.o cctbx/xray/boost_python/structure_factors_simple.o cctbx/xray/boost_python/curvatures_simple.o cctbx/xray/boost_python/targets.o cctbx/xray/boost_python/f_model_bpl.o cctbx/xray/boost_python/twin_targets.o cctbx/xray/boost_python/grouped_data.o cctbx/xray/boost_python/parameter_map.o cctbx/xray/boost_python/twin_components.o cctbx/xray/boost_python/extinction.o cctbx/xray/boost_python/sigmaa.o cctbx/xray/targets/shelxl_wght_ls_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_adp_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adp_restraints_ext.so.0 cctbx/adp_restraints/adp_restraints_bpl.o cctbx/adp_restraints/adp_restraints_ext.o cctbx/adp_restraints/rigid_bond_bpl.o cctbx/adp_restraints/rigu_bpl.o cctbx/adp_restraints/adp_similarity_bpl.o cctbx/adp_restraints/isotropic_adp_bpl.o cctbx/adp_restraints/aniso_restraints_bpl.o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/gltbx_fonts_ext.so.0.0.1'
-    'lib/gltbx_fonts_ext.so.0'->'lib/gltbx_fonts_ext.so.0.0.1'
-    'lib/gltbx_fonts_ext.so'->'lib/gltbx_fonts_ext.so.0.0.1'
-g++ -o lib/gltbx_glu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_glu_ext.so.0 gltbx/glu_ext.o gltbx/glu_defines_00_bpl.o gltbx/glu_defines_01_bpl.o gltbx/glu_functions_00_bpl.o gltbx/glu_functions_01_bpl.o gltbx/glu_functions_02_bpl.o gltbx/glu_functions_03_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
-Create symlinks for: 'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1'
-    'lib/cctbx_eltbx_fp_fdp_ext.so.0'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1'
-    'lib/cctbx_eltbx_fp_fdp_ext.so'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1'
-g++ -o lib/gltbx_viewer_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_viewer_utils_ext.so.0 gltbx/viewer_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
+g++ -o lib/determine_unit_cell_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=determine_unit_cell_ext.so.0 cctbx/uctbx/determine_unit_cell/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1'
+    'lib/cctbx_eltbx_wavelengths_ext.so.0'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1'
+    'lib/cctbx_eltbx_wavelengths_ext.so'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1'
+g++ -o lib/cctbx_translation_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_translation_search_ext.so.0 cctbx/translation_search/boost_python/translation_search_ext.o cctbx/translation_search/boost_python/fast_nv1995.o cctbx/translation_search/boost_python/fast_terms.o cctbx/translation_search/boost_python/symmetry_flags.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/cctbx_orientation_ext.so.0.0.1'
     'lib/cctbx_orientation_ext.so.0'->'lib/cctbx_orientation_ext.so.0.0.1'
     'lib/cctbx_orientation_ext.so'->'lib/cctbx_orientation_ext.so.0.0.1'
-g++ -o lib/gltbx_gl_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_gl_ext.so.0 gltbx/gl_ext.o gltbx/gl_defines_00_bpl.o gltbx/gl_defines_01_bpl.o gltbx/gl_defines_02_bpl.o gltbx/gl_defines_03_bpl.o gltbx/gl_defines_04_bpl.o gltbx/gl_defines_05_bpl.o gltbx/gl_defines_06_bpl.o gltbx/gl_defines_07_bpl.o gltbx/gl_functions_00_bpl.o gltbx/gl_functions_01_bpl.o gltbx/gl_functions_02_bpl.o gltbx/gl_functions_03_bpl.o gltbx/gl_functions_04_bpl.o gltbx/gl_functions_05_bpl.o gltbx/gl_functions_06_bpl.o gltbx/gl_functions_07_bpl.o gltbx/gl_functions_08_bpl.o gltbx/gl_functions_09_bpl.o gltbx/gl_functions_10_bpl.o gltbx/gl_functions_11_bpl.o gltbx/gl_functions_12_bpl.o gltbx/gl_functions_13_bpl.o gltbx/gl_functions_14_bpl.o gltbx/gl_functions_15_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
-Create symlinks for: 'lib/cctbx_miller_ext.so.0.0.1'
-    'lib/cctbx_miller_ext.so.0'->'lib/cctbx_miller_ext.so.0.0.1'
-    'lib/cctbx_miller_ext.so'->'lib/cctbx_miller_ext.so.0.0.1'
-g++ -o lib/cctbx_translation_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_translation_search_ext.so.0 cctbx/translation_search/boost_python/translation_search_ext.o cctbx/translation_search/boost_python/fast_nv1995.o cctbx/translation_search/boost_python/fast_terms.o cctbx/translation_search/boost_python/symmetry_flags.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_asymmetric_map_ext.so.0.0.1'
-    'lib/cctbx_asymmetric_map_ext.so.0'->'lib/cctbx_asymmetric_map_ext.so.0.0.1'
-    'lib/cctbx_asymmetric_map_ext.so'->'lib/cctbx_asymmetric_map_ext.so.0.0.1'
-g++ -o lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_bcr_bcr_ext.so.0 cctbx/maptbx/bcr/bcr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/gltbx_viewer_utils_ext.so.0.0.1'
-    'lib/gltbx_viewer_utils_ext.so.0'->'lib/gltbx_viewer_utils_ext.so.0.0.1'
-    'lib/gltbx_viewer_utils_ext.so'->'lib/gltbx_viewer_utils_ext.so.0.0.1'
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared<scitbx::vec2<double> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized]
+  905 |       type_list.append(object(handle<>(PyObject_Type(object(a).ptr()))));
+      |                                                      ^~~~~~~~~
+In file included from /usr/include/boost/python/args.hpp:22,
+                 from /usr/include/boost/python.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:11:
+/usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec2<double>&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec2<double>]’ declared here
+  246 |       explicit object(T const& x)
+      |                ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here
+  904 |       typename U::value_type a = typename U::value_type();
+      |                              ^
+g++ -o lib/cctbx_xray_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_ext.so.0 cctbx/xray/boost_python/xray_ext.o cctbx/xray/boost_python/conversions.o cctbx/xray/boost_python/gradient_flags.o cctbx/xray/boost_python/gradients_direct.o cctbx/xray/boost_python/each_hkl_gradients_direct.o cctbx/xray/boost_python/fast_gradients.o cctbx/xray/boost_python/minimization.o cctbx/xray/boost_python/scatterer_flags.o cctbx/xray/boost_python/scatterer.o cctbx/xray/boost_python/scattering_type_registry.o cctbx/xray/boost_python/sampling_base.o cctbx/xray/boost_python/sampled_model_density.o cctbx/xray/boost_python/structure_factors_direct.o cctbx/xray/boost_python/structure_factors_simple.o cctbx/xray/boost_python/curvatures_simple.o cctbx/xray/boost_python/targets.o cctbx/xray/boost_python/f_model_bpl.o cctbx/xray/boost_python/twin_targets.o cctbx/xray/boost_python/grouped_data.o cctbx/xray/boost_python/parameter_map.o cctbx/xray/boost_python/twin_components.o cctbx/xray/boost_python/extinction.o cctbx/xray/boost_python/sigmaa.o cctbx/xray/targets/shelxl_wght_ls_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1'
+    'lib/cctbx_eltbx_covalent_radii_ext.so.0'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1'
+    'lib/cctbx_eltbx_covalent_radii_ext.so'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1'
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared<scitbx::vec3<double> >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized]
+  905 |       type_list.append(object(handle<>(PyObject_Type(object(a).ptr()))));
+      |                                                      ^~~~~~~~~
+/usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec3<double>&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec3<double>]’ declared here
+  246 |       explicit object(T const& x)
+      |                ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here
+  904 |       typename U::value_type a = typename U::value_type();
+      |                              ^
+Create symlinks for: 'lib/cctbx_multipolar_ext.so.0.0.1'
+    'lib/cctbx_multipolar_ext.so.0'->'lib/cctbx_multipolar_ext.so.0.0.1'
+    'lib/cctbx_multipolar_ext.so'->'lib/cctbx_multipolar_ext.so.0.0.1'
+g++ -o lib/cctbx_eltbx_neutron_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_neutron_ext.so.0 cctbx/eltbx/boost_python/neutron_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/cctbx_dmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_dmtbx_ext.so.0 cctbx/dmtbx/boost_python/dmtbx_ext.o cctbx/dmtbx/boost_python/triplet_phase_relation.o cctbx/dmtbx/boost_python/triplet_generator.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_array_family_flex_ext.so.0 cctbx/array_family/boost_python/flex_ext.o cctbx/array_family/boost_python/flex_hendrickson_lattman.o cctbx/array_family/boost_python/flex_miller_index.o cctbx/array_family/boost_python/flex_xray_scatterer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/cctbx_sgtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_ext.so.0 cctbx/sgtbx/boost_python/sgtbx_ext.o cctbx/sgtbx/boost_python/brick.o cctbx/sgtbx/boost_python/change_of_basis.o cctbx/sgtbx/boost_python/find_affine.o cctbx/sgtbx/boost_python/lattice_symmetry.o cctbx/sgtbx/boost_python/phase_info.o cctbx/sgtbx/boost_python/reciprocal_space_asu.o cctbx/sgtbx/boost_python/rot_mx.o cctbx/sgtbx/boost_python/rt_mx.o cctbx/sgtbx/boost_python/search_symmetry.o cctbx/sgtbx/boost_python/seminvariant.o cctbx/sgtbx/boost_python/site_symmetry.o cctbx/sgtbx/boost_python/space_group.o cctbx/sgtbx/boost_python/space_group_type.o cctbx/sgtbx/boost_python/sym_equiv_sites.o cctbx/sgtbx/boost_python/symbols.o cctbx/sgtbx/boost_python/tensor_rank_2.o cctbx/sgtbx/boost_python/tensors.o cctbx/sgtbx/boost_python/tr_vec.o cctbx/sgtbx/boost_python/wyckoff.o cctbx/sgtbx/boost_python/select_generators.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/gltbx_glu_ext.so.0.0.1'
-    'lib/gltbx_glu_ext.so.0'->'lib/gltbx_glu_ext.so.0.0.1'
-    'lib/gltbx_glu_ext.so'->'lib/gltbx_glu_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_eltbx_henke_ext.so.0.0.1'
+    'lib/cctbx_eltbx_henke_ext.so.0'->'lib/cctbx_eltbx_henke_ext.so.0.0.1'
+    'lib/cctbx_eltbx_henke_ext.so'->'lib/cctbx_eltbx_henke_ext.so.0.0.1'
 g++ -o lib/libmmtbx_tls.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libmmtbx_tls.so.0 mmtbx/tls/decompose.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lm
-g++ -o lib/cctbx_eltbx_sasaki_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_sasaki_ext.so.0 cctbx/eltbx/boost_python/sasaki_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_symmetry_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_symmetry_search_ext.so.0 cctbx/symmetry_search/boost_python/symmetry_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_tiny_pse_ext.so.0 cctbx/eltbx/boost_python/tiny_pse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_math_ext.so.0 cctbx/math/boost_python/math_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_bcr_bcr_ext.so.0 cctbx/maptbx/bcr/bcr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/determine_unit_cell_ext.so.0.0.1'
+    'lib/determine_unit_cell_ext.so.0'->'lib/determine_unit_cell_ext.so.0.0.1'
+    'lib/determine_unit_cell_ext.so'->'lib/determine_unit_cell_ext.so.0.0.1'
+g++ -o lib/gltbx_util_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_util_ext.so.0 gltbx/util_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
 Create symlinks for: 'lib/cctbx_translation_search_ext.so.0.0.1'
     'lib/cctbx_translation_search_ext.so.0'->'lib/cctbx_translation_search_ext.so.0.0.1'
     'lib/cctbx_translation_search_ext.so'->'lib/cctbx_translation_search_ext.so.0.0.1'
+g++ -o lib/cctbx_sgtbx_asu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_asu_ext.so.0 cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_eltbx_neutron_ext.so.0.0.1'
+    'lib/cctbx_eltbx_neutron_ext.so.0'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1'
+    'lib/cctbx_eltbx_neutron_ext.so'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1'
+g++ -o lib/gltbx_quadrics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_quadrics_ext.so.0 gltbx/quadrics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
+g++ -o lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_chemical_elements_ext.so.0 cctbx/eltbx/boost_python/chemical_elements_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/libmmtbx_tls.so.0.0.1'
     'lib/libmmtbx_tls.so.0'->'lib/libmmtbx_tls.so.0.0.1'
     'lib/libmmtbx_tls.so'->'lib/libmmtbx_tls.so.0.0.1'
+g++ -o lib/cctbx_symmetry_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_symmetry_search_ext.so.0 cctbx/symmetry_search/boost_python/symmetry_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_dmtbx_ext.so.0.0.1'
+    'lib/cctbx_dmtbx_ext.so.0'->'lib/cctbx_dmtbx_ext.so.0.0.1'
+    'lib/cctbx_dmtbx_ext.so'->'lib/cctbx_dmtbx_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_math_ext.so.0.0.1'
+    'lib/cctbx_math_ext.so.0'->'lib/cctbx_math_ext.so.0.0.1'
+    'lib/cctbx_math_ext.so'->'lib/cctbx_math_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1'
+    'lib/cctbx_eltbx_tiny_pse_ext.so.0'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1'
+    'lib/cctbx_eltbx_tiny_pse_ext.so'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1'
 g++ -o lib/cctbx_geometry_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_ext.so.0 cctbx/geometry/boost_python/geometry_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_anharmonic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_anharmonic_ext.so.0 cctbx/adptbx/boost_python/anharmonic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1'
     'lib/cctbx_maptbx_bcr_bcr_ext.so.0'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1'
     'lib/cctbx_maptbx_bcr_bcr_ext.so'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1'
-g++ -o lib/cctbx_eltbx_wavelengths_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_wavelengths_ext.so.0 cctbx/eltbx/boost_python/wavelengths_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_dmtbx_ext.so.0.0.1'
-    'lib/cctbx_dmtbx_ext.so.0'->'lib/cctbx_dmtbx_ext.so.0.0.1'
-    'lib/cctbx_dmtbx_ext.so'->'lib/cctbx_dmtbx_ext.so.0.0.1'
-g++ -o lib/cctbx_anharmonic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_anharmonic_ext.so.0 cctbx/adptbx/boost_python/anharmonic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_eltbx_sasaki_ext.so.0.0.1'
-    'lib/cctbx_eltbx_sasaki_ext.so.0'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1'
-    'lib/cctbx_eltbx_sasaki_ext.so'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1'
-g++ -o lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_covalent_radii_ext.so.0 cctbx/eltbx/boost_python/covalent_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/gltbx_quadrics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_quadrics_ext.so.0 gltbx/quadrics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm
+g++ -o lib/cctbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_array_family_flex_ext.so.0 cctbx/array_family/boost_python/flex_ext.o cctbx/array_family/boost_python/flex_hendrickson_lattman.o cctbx/array_family/boost_python/flex_miller_index.o cctbx/array_family/boost_python/flex_xray_scatterer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_icsd_radii_ext.so.0 cctbx/eltbx/boost_python/icsd_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_miller_ext.so.0.0.1'
+    'lib/cctbx_miller_ext.so.0'->'lib/cctbx_miller_ext.so.0.0.1'
+    'lib/cctbx_miller_ext.so'->'lib/cctbx_miller_ext.so.0.0.1'
+Create symlinks for: 'lib/gltbx_util_ext.so.0.0.1'
+    'lib/gltbx_util_ext.so.0'->'lib/gltbx_util_ext.so.0.0.1'
+    'lib/gltbx_util_ext.so'->'lib/gltbx_util_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1'
+    'lib/cctbx_eltbx_chemical_elements_ext.so.0'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1'
+    'lib/cctbx_eltbx_chemical_elements_ext.so'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1'
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:23:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table<VarientType>::insert_visitor::operator()(T&) const [with T = scitbx::af::shared<scitbx::vec2<double> >; VarientType = boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  218 |         v.insert(v.begin() + pos, n, typename T::value_type());
+      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:18:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec2<double>&’ to ‘void scitbx::af::shared_plain<ElementType>::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec2<double>]’ declared here
+  124 |       void insert(ElementType* pos, size_type const& n, ElementType const& x) {
+      |            ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘<anonymous>’ declared here
+  218 |         v.insert(v.begin() + pos, n, typename T::value_type());
+      |                                                  ^~~~~~~~~~~~
+g++ -o lib/cctbx_uctbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_uctbx_ext.so.0 cctbx/uctbx/boost_python/uctbx_ext.o cctbx/uctbx/boost_python/fast_minimum_reduction.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/cctbx_emma_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_emma_ext.so.0 cctbx/boost_python/emma_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/cctbx_covariance_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_covariance_ext.so.0 cctbx/covariance/boost_python/covariance_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_symmetry_search_ext.so.0.0.1'
-    'lib/cctbx_symmetry_search_ext.so.0'->'lib/cctbx_symmetry_search_ext.so.0.0.1'
-    'lib/cctbx_symmetry_search_ext.so'->'lib/cctbx_symmetry_search_ext.so.0.0.1'
-g++ -o lib/cctbx_multipolar_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_multipolar_ext.so.0 cctbx/multipolar/aspherical_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/cctbx_french_wilson_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_french_wilson_ext.so.0 cctbx/boost_python/french_wilson_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/cctbx_anharmonic_ext.so.0.0.1'
     'lib/cctbx_anharmonic_ext.so.0'->'lib/cctbx_anharmonic_ext.so.0.0.1'
     'lib/cctbx_anharmonic_ext.so'->'lib/cctbx_anharmonic_ext.so.0.0.1'
-Create symlinks for: 'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1'
-    'lib/cctbx_eltbx_covalent_radii_ext.so.0'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1'
-    'lib/cctbx_eltbx_covalent_radii_ext.so'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1'
-g++ -o lib/cctbx_french_wilson_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_french_wilson_ext.so.0 cctbx/boost_python/french_wilson_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table<VarientType>::insert_visitor::operator()(T&) const [with T = scitbx::af::shared<scitbx::vec3<double> >; VarientType = boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > >]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  218 |         v.insert(v.begin() + pos, n, typename T::value_type());
+      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec3<double>&’ to ‘void scitbx::af::shared_plain<ElementType>::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec3<double>]’ declared here
+  124 |       void insert(ElementType* pos, size_type const& n, ElementType const& x) {
+      |            ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘<anonymous>’ declared here
+  218 |         v.insert(v.begin() + pos, n, typename T::value_type());
+      |                                                  ^~~~~~~~~~~~
+g++ -o lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_xray_scattering_ext.so.0 cctbx/eltbx/boost_python/xray_scattering_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/iotbx_xplor_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_xplor_ext.so.0 iotbx/xplor/boost_python/xplor_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_xplor -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/cctbx_symmetry_search_ext.so.0.0.1'
+    'lib/cctbx_symmetry_search_ext.so.0'->'lib/cctbx_symmetry_search_ext.so.0.0.1'
+    'lib/cctbx_symmetry_search_ext.so'->'lib/cctbx_symmetry_search_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1'
+    'lib/cctbx_eltbx_icsd_radii_ext.so.0'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1'
+    'lib/cctbx_eltbx_icsd_radii_ext.so'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1'
+Create symlinks for: 'lib/gltbx_quadrics_ext.so.0.0.1'
+    'lib/gltbx_quadrics_ext.so.0'->'lib/gltbx_quadrics_ext.so.0.0.1'
+    'lib/gltbx_quadrics_ext.so'->'lib/gltbx_quadrics_ext.so.0.0.1'
 Create symlinks for: 'lib/cctbx_geometry_ext.so.0.0.1'
     'lib/cctbx_geometry_ext.so.0'->'lib/cctbx_geometry_ext.so.0.0.1'
     'lib/cctbx_geometry_ext.so'->'lib/cctbx_geometry_ext.so.0.0.1'
-g++ -o lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_icsd_radii_ext.so.0 cctbx/eltbx/boost_python/icsd_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_emma_ext.so.0.0.1'
-    'lib/cctbx_emma_ext.so.0'->'lib/cctbx_emma_ext.so.0.0.1'
-    'lib/cctbx_emma_ext.so'->'lib/cctbx_emma_ext.so.0.0.1'
-Create symlinks for: 'lib/cctbx_multipolar_ext.so.0.0.1'
-    'lib/cctbx_multipolar_ext.so.0'->'lib/cctbx_multipolar_ext.so.0.0.1'
-    'lib/cctbx_multipolar_ext.so'->'lib/cctbx_multipolar_ext.so.0.0.1'
-Create symlinks for: 'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1'
-    'lib/cctbx_eltbx_wavelengths_ext.so.0'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1'
-    'lib/cctbx_eltbx_wavelengths_ext.so'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1'
-Create symlinks for: 'lib/gltbx_gl_ext.so.0.0.1'
-    'lib/gltbx_gl_ext.so.0'->'lib/gltbx_gl_ext.so.0.0.1'
-    'lib/gltbx_gl_ext.so'->'lib/gltbx_gl_ext.so.0.0.1'
 g++ -o smtbx/refinement/constraints/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/geometrical_hydrogens.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/cctbx_covariance_ext.so.0.0.1'
-    'lib/cctbx_covariance_ext.so.0'->'lib/cctbx_covariance_ext.so.0.0.1'
-    'lib/cctbx_covariance_ext.so'->'lib/cctbx_covariance_ext.so.0.0.1'
 g++ -o smtbx/refinement/constraints/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/occupancy.cpp
-Create symlinks for: 'lib/gltbx_quadrics_ext.so.0.0.1'
-    'lib/gltbx_quadrics_ext.so.0'->'lib/gltbx_quadrics_ext.so.0.0.1'
-    'lib/gltbx_quadrics_ext.so'->'lib/gltbx_quadrics_ext.so.0.0.1'
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1'
-    'lib/cctbx_eltbx_icsd_radii_ext.so.0'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1'
-    'lib/cctbx_eltbx_icsd_radii_ext.so'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_sgtbx_asu_ext.so.0.0.1'
+    'lib/cctbx_sgtbx_asu_ext.so.0'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1'
+    'lib/cctbx_sgtbx_asu_ext.so'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1'
 g++ -o smtbx/refinement/constraints/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/reparametrisation.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/refinement/constraints/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/rigid.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/librstbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=librstbx.so.0 rstbx/dps_core/dps_core.o rstbx/dps_core/directional_fft.o rstbx/dps_core/direction.o rstbx/indexing_api/indexing_api.o rstbx/diffraction/ewald_sphere.o rstbx/diffraction/partial_spot_position_partial_H.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lcctbx -lm
+g++ -o smtbx/refinement/constraints/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/same_group.cpp
 Create symlinks for: 'lib/cctbx_french_wilson_ext.so.0.0.1'
     'lib/cctbx_french_wilson_ext.so.0'->'lib/cctbx_french_wilson_ext.so.0.0.1'
     'lib/cctbx_french_wilson_ext.so'->'lib/cctbx_french_wilson_ext.so.0.0.1'
-g++ -o smtbx/refinement/constraints/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/same_group.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/refinement/constraints/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/scaled_adp.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/cctbx_emma_ext.so.0.0.1'
+    'lib/cctbx_emma_ext.so.0'->'lib/cctbx_emma_ext.so.0.0.1'
+    'lib/cctbx_emma_ext.so'->'lib/cctbx_emma_ext.so.0.0.1'
 g++ -o smtbx/refinement/constraints/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/shared.cpp
-g++ -o smtbx/refinement/constraints/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/special_position.cpp
+Create symlinks for: 'lib/iotbx_xplor_ext.so.0.0.1'
+    'lib/iotbx_xplor_ext.so.0'->'lib/iotbx_xplor_ext.so.0.0.1'
+    'lib/iotbx_xplor_ext.so'->'lib/iotbx_xplor_ext.so.0.0.1'
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o smtbx/refinement/constraints/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/special_position.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1'
+    'lib/cctbx_eltbx_xray_scattering_ext.so.0'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1'
+    'lib/cctbx_eltbx_xray_scattering_ext.so'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_uctbx_ext.so.0.0.1'
+    'lib/cctbx_uctbx_ext.so.0'->'lib/cctbx_uctbx_ext.so.0.0.1'
+    'lib/cctbx_uctbx_ext.so'->'lib/cctbx_uctbx_ext.so.0.0.1'
 g++ -o smtbx/refinement/constraints/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/symmetry_equivalent.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o smtbx/refinement/constraints/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/u_eq_dependent_u_iso.cpp
+Create symlinks for: 'lib/cctbx_adp_restraints_ext.so.0.0.1'
+    'lib/cctbx_adp_restraints_ext.so.0'->'lib/cctbx_adp_restraints_ext.so.0.0.1'
+    'lib/cctbx_adp_restraints_ext.so'->'lib/cctbx_adp_restraints_ext.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/cctbx_crystal_ext.so.0.0.1'
     'lib/cctbx_crystal_ext.so.0'->'lib/cctbx_crystal_ext.so.0.0.1'
     'lib/cctbx_crystal_ext.so'->'lib/cctbx_crystal_ext.so.0.0.1'
-g++ -o smtbx/refinement/constraints/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/u_eq_dependent_u_iso.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/librstbx.so.0.0.1'
-    'lib/librstbx.so.0'->'lib/librstbx.so.0.0.1'
-    'lib/librstbx.so'->'lib/librstbx.so.0.0.1'
 g++ -o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/u_iso_dependent_u_iso.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/cctbx_adp_restraints_ext.so.0.0.1'
-    'lib/cctbx_adp_restraints_ext.so.0'->'lib/cctbx_adp_restraints_ext.so.0.0.1'
-    'lib/cctbx_adp_restraints_ext.so'->'lib/cctbx_adp_restraints_ext.so.0.0.1'
 g++ -o mmtbx/alignment/alignment_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/alignment/alignment_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/iotbx_shelx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_shelx_ext.so.0 iotbx/shelx/shelx_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_xray_ext.so.0.0.1'
-    'lib/cctbx_xray_ext.so.0'->'lib/cctbx_xray_ext.so.0.0.1'
-    'lib/cctbx_xray_ext.so'->'lib/cctbx_xray_ext.so.0.0.1'
-g++ -o mmtbx/building/loop_closure/ccd_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/building/loop_closure/ccd_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/cctbx_array_family_flex_ext.so.0.0.1'
     'lib/cctbx_array_family_flex_ext.so.0'->'lib/cctbx_array_family_flex_ext.so.0.0.1'
     'lib/cctbx_array_family_flex_ext.so'->'lib/cctbx_array_family_flex_ext.so.0.0.1'
+g++ -o mmtbx/building/loop_closure/ccd_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/building/loop_closure/ccd_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/iotbx_shelx_ext.so.0.0.1'
     'lib/iotbx_shelx_ext.so.0'->'lib/iotbx_shelx_ext.so.0.0.1'
     'lib/iotbx_shelx_ext.so'->'lib/iotbx_shelx_ext.so.0.0.1'
 g++ -o mmtbx/bulk_solvent/bulk_solvent_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/bulk_solvent/bulk_solvent_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/librstbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=librstbx.so.0 rstbx/dps_core/dps_core.o rstbx/dps_core/directional_fft.o rstbx/dps_core/direction.o rstbx/indexing_api/indexing_api.o rstbx/diffraction/ewald_sphere.o rstbx/diffraction/partial_spot_position_partial_H.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lcctbx -lm
 g++ -o mmtbx/bulk_solvent/bulk_solvent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/bulk_solvent/bulk_solvent.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o mmtbx/den/boost_python/den_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/den/boost_python/den_ext.cpp
@@ -15048,38 +15129,40 @@
 g++ -o mmtbx/secondary_structure/dssp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/secondary_structure/dssp_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o mmtbx/dynamics/dynamics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/dynamics/dynamics_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/iotbx_xplor_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_xplor_ext.so.0 iotbx/xplor/boost_python/xplor_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_xplor -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/cctbx_sgtbx_ext.so.0.0.1'
-    'lib/cctbx_sgtbx_ext.so.0'->'lib/cctbx_sgtbx_ext.so.0.0.1'
-    'lib/cctbx_sgtbx_ext.so'->'lib/cctbx_sgtbx_ext.so.0.0.1'
 g++ -o mmtbx/dynamics/dynamics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/dynamics/dynamics.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/iotbx_xplor_ext.so.0.0.1'
-    'lib/iotbx_xplor_ext.so.0'->'lib/iotbx_xplor_ext.so.0.0.1'
-    'lib/iotbx_xplor_ext.so'->'lib/iotbx_xplor_ext.so.0.0.1'
-g++ -o mmtbx/f_model/f_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/f_model/f_model_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/geometry/boost_python/asa_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/asa_ext.cpp
+Create symlinks for: 'lib/librstbx.so.0.0.1'
+    'lib/librstbx.so.0'->'lib/librstbx.so.0.0.1'
+    'lib/librstbx.so'->'lib/librstbx.so.0.0.1'
+g++ -o mmtbx/f_model/f_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/f_model/f_model_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/cctbx_sgtbx_ext.so.0.0.1'
+    'lib/cctbx_sgtbx_ext.so.0'->'lib/cctbx_sgtbx_ext.so.0.0.1'
+    'lib/cctbx_sgtbx_ext.so'->'lib/cctbx_sgtbx_ext.so.0.0.1'
+Create symlinks for: 'lib/cctbx_xray_ext.so.0.0.1'
+    'lib/cctbx_xray_ext.so.0'->'lib/cctbx_xray_ext.so.0.0.1'
+    'lib/cctbx_xray_ext.so'->'lib/cctbx_xray_ext.so.0.0.1'
 Create symlinks for: 'lib/cctbx_geometry_restraints_ext.so.0.0.1'
     'lib/cctbx_geometry_restraints_ext.so.0'->'lib/cctbx_geometry_restraints_ext.so.0.0.1'
     'lib/cctbx_geometry_restraints_ext.so'->'lib/cctbx_geometry_restraints_ext.so.0.0.1'
+g++ -o mmtbx/geometry/boost_python/asa_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/asa_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/libspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libspotfinder.so.0 spotfinder/core_toolbox/spot.o spotfinder/core_toolbox/libdistl.o spotfinder/core_toolbox/hough.o spotfinder/core_toolbox/distl.o spotfinder/core_toolbox/spotfilter.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lann-cctbx -lomptbx -lm
 g++ -o mmtbx/geometry/boost_python/clash_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/clash_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o mmtbx/geometry/boost_python/indexing_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp
 g++ -o mmtbx/geometry/boost_python/primitive_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/primitive_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o mmtbx/geometry/boost_python/shared_types_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/sphere_surface_sampling_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/libspotfinder.so.0.0.1'
     'lib/libspotfinder.so.0'->'lib/libspotfinder.so.0.0.1'
     'lib/libspotfinder.so'->'lib/libspotfinder.so.0.0.1'
 g++ -o lib/libdxtbxspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libdxtbxspotfinder.so.0 spotfinder/dxtbx_toolbox/libdistl.o spotfinder/dxtbx_toolbox/distl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lspotfinder -lann-cctbx -lomptbx -lm
-g++ -o mmtbx/geometry/boost_python/shared_types_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/sphere_surface_sampling_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/libdxtbxspotfinder.so.0.0.1'
     'lib/libdxtbxspotfinder.so.0'->'lib/libdxtbxspotfinder.so.0.0.1'
     'lib/libdxtbxspotfinder.so'->'lib/libdxtbxspotfinder.so.0.0.1'
@@ -15097,76 +15180,12 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o mmtbx/ncs/tncs_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/ncs/tncs_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared<scitbx::vec2<double> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized]
-  905 |       type_list.append(object(handle<>(PyObject_Type(object(a).ptr()))));
-      |                                                      ^~~~~~~~~
-In file included from /usr/include/boost/python/args.hpp:22,
-                 from /usr/include/boost/python.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:11:
-/usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec2<double>&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec2<double>]’ declared here
-  246 |       explicit object(T const& x)
-      |                ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here
-  904 |       typename U::value_type a = typename U::value_type();
-      |                              ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared<scitbx::vec3<double> >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized]
-  905 |       type_list.append(object(handle<>(PyObject_Type(object(a).ptr()))));
-      |                                                      ^~~~~~~~~
-/usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec3<double>&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec3<double>]’ declared here
-  246 |       explicit object(T const& x)
-      |                ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here
-  904 |       typename U::value_type a = typename U::value_type();
-      |                              ^
 g++ -o mmtbx/pair_interaction/interaction_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/pair_interaction/interaction_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:23:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table<VarientType>::insert_visitor::operator()(T&) const [with T = scitbx::af::shared<scitbx::vec2<double> >; VarientType = boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  218 |         v.insert(v.begin() + pos, n, typename T::value_type());
-      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/scan.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec2<double>&’ to ‘void scitbx::af::shared_plain<ElementType>::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec2<double>]’ declared here
-  124 |       void insert(ElementType* pos, size_type const& n, ElementType const& x) {
-      |            ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘<anonymous>’ declared here
-  218 |         v.insert(v.begin() + pos, n, typename T::value_type());
-      |                                                  ^~~~~~~~~~~~
 g++ -o mmtbx/probe/boost_python/probe_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/probe/boost_python/probe_bpl.cpp
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table<VarientType>::insert_visitor::operator()(T&) const [with T = scitbx::af::shared<scitbx::vec3<double> >; VarientType = boost::variant<boost::detail::variant::over_sequence<boost::mpl::l_item<mpl_::long_<6>, scitbx::af::shared<bool>, boost::mpl::l_item<mpl_::long_<5>, scitbx::af::shared<int>, boost::mpl::l_item<mpl_::long_<4>, scitbx::af::shared<double>, boost::mpl::l_item<mpl_::long_<3>, scitbx::af::shared<std::__cxx11::basic_string<char> >, boost::mpl::l_item<mpl_::long_<2>, scitbx::af::shared<scitbx::vec2<double> >, boost::mpl::l_item<mpl_::long_<1>, scitbx::af::shared<scitbx::vec3<double> >, boost::mpl::l_end> > > > > > > >]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  218 |         v.insert(v.begin() + pos, n, typename T::value_type());
-      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec3<double>&’ to ‘void scitbx::af::shared_plain<ElementType>::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec3<double>]’ declared here
-  124 |       void insert(ElementType* pos, size_type const& n, ElementType const& x) {
-      |            ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘<anonymous>’ declared here
-  218 |         v.insert(v.begin() + pos, n, typename T::value_type());
-      |                                                  ^~~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o mmtbx/probe/Scoring.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/probe/Scoring.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/probe/DotSpheres.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/probe/DotSpheres.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/probe/SpatialQuery.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/probe/SpatialQuery.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/reduce/boost_python/reduce_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/reduce/boost_python/reduce_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/reduce/PositionReturn.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/reduce/PositionReturn.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/reduce/InteractionGraph.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/reduce/InteractionGraph.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/reduce/Optimizers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/reduce/Optimizers.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/libsmtbx_refinement_constraints.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libsmtbx_refinement_constraints.so.0 smtbx/refinement/constraints/affine.o smtbx/refinement/constraints/geometrical_hydrogens.o smtbx/refinement/constraints/occupancy.o smtbx/refinement/constraints/reparametrisation.o smtbx/refinement/constraints/rigid.o smtbx/refinement/constraints/same_group.o smtbx/refinement/constraints/scaled_adp.o smtbx/refinement/constraints/shared.o smtbx/refinement/constraints/special_position.o smtbx/refinement/constraints/symmetry_equivalent.o smtbx/refinement/constraints/u_eq_dependent_u_iso.o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
@@ -15178,10 +15197,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
-Create symlinks for: 'lib/libsmtbx_refinement_constraints.so.0.0.1'
-    'lib/libsmtbx_refinement_constraints.so.0'->'lib/libsmtbx_refinement_constraints.so.0.0.1'
-    'lib/libsmtbx_refinement_constraints.so'->'lib/libsmtbx_refinement_constraints.so.0.0.1'
-g++ -o mmtbx/rotamer/fit_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/rotamer/fit_ext.cpp
+g++ -o mmtbx/probe/DotSpheres.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/probe/DotSpheres.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o mmtbx/probe/SpatialQuery.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/probe/SpatialQuery.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
@@ -15230,7 +15248,11 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o mmtbx/rsr/rsr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/rsr/rsr_ext.cpp
+g++ -o mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o mmtbx/reduce/boost_python/reduce_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/reduce/boost_python/reduce_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o mmtbx/reduce/PositionReturn.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/reduce/PositionReturn.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9,
                  from /usr/include/boost/function/detail/prologue.hpp:12,
@@ -15249,14 +15271,26 @@
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
-g++ -o lib/mmtbx_dynamics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dynamics_ext.so.0 mmtbx/dynamics/dynamics_ext.o mmtbx/dynamics/dynamics.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o mmtbx/scaling/scaling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/scaling/scaling_ext.cpp
+g++ -o mmtbx/reduce/InteractionGraph.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/reduce/InteractionGraph.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/iotbx_mtz_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_mtz_ext.so.0 iotbx/mtz/ext.o iotbx/mtz/object_bpl.o iotbx/mtz/crystal_bpl.o iotbx/mtz/dataset_bpl.o iotbx/mtz/column_bpl.o iotbx/mtz/batch_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_mtz -lcctbx -lccp4io -lccp4c -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/libsmtbx_refinement_constraints.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libsmtbx_refinement_constraints.so.0 smtbx/refinement/constraints/affine.o smtbx/refinement/constraints/geometrical_hydrogens.o smtbx/refinement/constraints/occupancy.o smtbx/refinement/constraints/reparametrisation.o smtbx/refinement/constraints/rigid.o smtbx/refinement/constraints/same_group.o smtbx/refinement/constraints/scaled_adp.o smtbx/refinement/constraints/shared.o smtbx/refinement/constraints/special_position.o smtbx/refinement/constraints/symmetry_equivalent.o smtbx/refinement/constraints/u_eq_dependent_u_iso.o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o lib/iotbx_detectors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_ext.so.0 iotbx/detectors/detectors_ext.o iotbx/detectors/image_divider.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/iotbx_detectors_ext.so.0.0.1'
+    'lib/iotbx_detectors_ext.so.0'->'lib/iotbx_detectors_ext.so.0.0.1'
+    'lib/iotbx_detectors_ext.so'->'lib/iotbx_detectors_ext.so.0.0.1'
+Create symlinks for: 'lib/libsmtbx_refinement_constraints.so.0.0.1'
+    'lib/libsmtbx_refinement_constraints.so.0'->'lib/libsmtbx_refinement_constraints.so.0.0.1'
+    'lib/libsmtbx_refinement_constraints.so'->'lib/libsmtbx_refinement_constraints.so.0.0.1'
+g++ -o lib/libiotbx_pdb.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_pdb.so.0 iotbx/pdb/hybrid_36_c.o iotbx/pdb/hybrid_36_cpp.o iotbx/pdb/utils.o iotbx/pdb/write_utils.o iotbx/pdb/hierarchy.o iotbx/pdb/hierarchy_select.o iotbx/pdb/hierarchy_atoms.o iotbx/pdb/construct_hierarchy.o iotbx/pdb/overall_counts.o iotbx/pdb/hierarchy_write.o iotbx/pdb/atom_selection.o iotbx/pdb/input.o iotbx/pdb/input_write.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o mmtbx/reduce/Optimizers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/reduce/Optimizers.cpp
+g++ -o mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/mmtbx_dynamics_ext.so.0.0.1'
-    'lib/mmtbx_dynamics_ext.so.0'->'lib/mmtbx_dynamics_ext.so.0.0.1'
-    'lib/mmtbx_dynamics_ext.so'->'lib/mmtbx_dynamics_ext.so.0.0.1'
-g++ -o mmtbx/scaling/twinning_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/scaling/twinning_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/iotbx_mtz_ext.so.0.0.1'
+    'lib/iotbx_mtz_ext.so.0'->'lib/iotbx_mtz_ext.so.0.0.1'
+    'lib/iotbx_mtz_ext.so'->'lib/iotbx_mtz_ext.so.0.0.1'
+g++ -o mmtbx/rotamer/fit_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/rotamer/fit_ext.cpp
 In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9,
                  from /usr/include/boost/function/detail/prologue.hpp:12,
                  from /usr/include/boost/function/function_template.hpp:13,
@@ -15270,13 +15304,8 @@
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
-g++ -o lib/mmtbx_alignment_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_alignment_ext.so.0 mmtbx/alignment/alignment_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/iotbx_mtz_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_mtz_ext.so.0 iotbx/mtz/ext.o iotbx/mtz/object_bpl.o iotbx/mtz/crystal_bpl.o iotbx/mtz/dataset_bpl.o iotbx/mtz/column_bpl.o iotbx/mtz/batch_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_mtz -lcctbx -lccp4io -lccp4c -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/mmtbx_alignment_ext.so.0.0.1'
-    'lib/mmtbx_alignment_ext.so.0'->'lib/mmtbx_alignment_ext.so.0.0.1'
-    'lib/mmtbx_alignment_ext.so'->'lib/mmtbx_alignment_ext.so.0.0.1'
-g++ -o mmtbx/scaling/relative_scaling_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/scaling/relative_scaling_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o mmtbx/rsr/rsr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/rsr/rsr_ext.cpp
 In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9,
                  from /usr/include/boost/function/detail/prologue.hpp:12,
                  from /usr/include/boost/function/function_template.hpp:13,
@@ -15290,10 +15319,14 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object/class.hpp:9,
                  from /usr/include/boost/python/class.hpp:13,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/asa_ext.cpp:2:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/clash_ext.cpp:2:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/libiotbx_pdb.so.0.0.1'
+    'lib/libiotbx_pdb.so.0'->'lib/libiotbx_pdb.so.0.0.1'
+    'lib/libiotbx_pdb.so'->'lib/libiotbx_pdb.so.0.0.1'
 In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9,
                  from /usr/include/boost/function/detail/prologue.hpp:12,
                  from /usr/include/boost/function/function_template.hpp:13,
@@ -15307,38 +15340,36 @@
                  from /usr/include/boost/python/object_core.hpp:14,
                  from /usr/include/boost/python/object/class.hpp:9,
                  from /usr/include/boost/python/class.hpp:13,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/clash_ext.cpp:2:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry/boost_python/asa_ext.cpp:2:
 /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
    36 | BOOST_PRAGMA_MESSAGE(
       | ^~~~~~~~~~~~~~~~~~~~
-Create symlinks for: 'lib/iotbx_mtz_ext.so.0.0.1'
-    'lib/iotbx_mtz_ext.so.0'->'lib/iotbx_mtz_ext.so.0.0.1'
-    'lib/iotbx_mtz_ext.so'->'lib/iotbx_mtz_ext.so.0.0.1'
+g++ -o lib/iotbx_pdb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_ext.so.0 iotbx/pdb/ext.o iotbx/pdb/hybrid_36_bpl.o iotbx/pdb/common_residue_names_bpl.o iotbx/pdb/rna_dna_atom_names_bpl.o iotbx/pdb/input_bpl.o iotbx/pdb/xray_structure_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/mmtbx_dssp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dssp_ext.so.0 mmtbx/secondary_structure/dssp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/mmtbx_dssp_ext.so.0.0.1'
+    'lib/mmtbx_dssp_ext.so.0'->'lib/mmtbx_dssp_ext.so.0.0.1'
+    'lib/mmtbx_dssp_ext.so'->'lib/mmtbx_dssp_ext.so.0.0.1'
+g++ -o mmtbx/scaling/scaling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/scaling/scaling_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/iotbx_pdb_ext.so.0.0.1'
+    'lib/iotbx_pdb_ext.so.0'->'lib/iotbx_pdb_ext.so.0.0.1'
+    'lib/iotbx_pdb_ext.so'->'lib/iotbx_pdb_ext.so.0.0.1'
+g++ -o lib/mmtbx_dynamics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dynamics_ext.so.0 mmtbx/dynamics/dynamics_ext.o mmtbx/dynamics/dynamics.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/cctbx_maptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_ext.so.0 cctbx/maptbx/boost_python/maptbx_ext.o cctbx/maptbx/boost_python/grid_indices_around_sites.o cctbx/maptbx/boost_python/grid_tags.o cctbx/maptbx/boost_python/gridding.o cctbx/maptbx/boost_python/misc.o cctbx/maptbx/boost_python/peak_search.o cctbx/maptbx/boost_python/pymol_interface.o cctbx/maptbx/boost_python/statistics.o cctbx/maptbx/boost_python/structure_factors.o cctbx/maptbx/boost_python/coordinate_transformers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o mmtbx/scaling/outlier_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/scaling/outlier_bpl.cpp
+g++ -o mmtbx/scaling/twinning_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/scaling/twinning_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/mmtbx_dynamics_ext.so.0.0.1'
+    'lib/mmtbx_dynamics_ext.so.0'->'lib/mmtbx_dynamics_ext.so.0.0.1'
+    'lib/mmtbx_dynamics_ext.so'->'lib/mmtbx_dynamics_ext.so.0.0.1'
+g++ -o mmtbx/scaling/relative_scaling_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/scaling/relative_scaling_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/mmtbx_geometry_primitive_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_primitive_ext.so.0 mmtbx/geometry/boost_python/primitive_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o mmtbx/secondary_structure/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/secondary_structure/ext.cpp
 Create symlinks for: 'lib/mmtbx_geometry_primitive_ext.so.0.0.1'
     'lib/mmtbx_geometry_primitive_ext.so.0'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1'
     'lib/mmtbx_geometry_primitive_ext.so'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1'
+g++ -o mmtbx/scaling/outlier_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/scaling/outlier_bpl.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/tls/decompose_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/decompose_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/reference_coordinate.h:2,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:13:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  100 |         for (int i=0; i<m.size(); ++i) {
-      |                       ~^~~~~~~~~
-Create symlinks for: 'lib/cctbx_maptbx_ext.so.0.0.1'
-    'lib/cctbx_maptbx_ext.so.0'->'lib/cctbx_maptbx_ext.so.0.0.1'
-    'lib/cctbx_maptbx_ext.so'->'lib/cctbx_maptbx_ext.so.0.0.1'
+g++ -o lib/mmtbx_geometry_shared_types_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_shared_types_ext.so.0 mmtbx/geometry/boost_python/shared_types_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/xray/scatterer.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/restraints.h:6,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral.h:6,
@@ -15348,20 +15379,19 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |         for (int i=0; i<m.size(); ++i) {
       |                       ~^~~~~~~~~
-g++ -o mmtbx/tls/tls_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/tls_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:14:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/proxy_select.h: In instantiation of ‘scitbx::af::shared<float_t> cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref<ElementType>&, const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&) [with ProxyType = mmtbx::geometry_restraints::reference_coordinate_proxy]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:80:41:   required from here
-   80 |             cctbx::geometry_restraints::shared_proxy_remove, (
-      |                                         ^~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<unsigned int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  187 |       if (match_ctr != i_seqs.size()) {
-      |           ~~~~~~~~~~^~~~~~~~~~~~~~~~
-g++ -o mmtbx/tls/optimise_amplitudes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/optimise_amplitudes.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/tls/optimise_amplitudes_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/optimise_amplitudes_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/cctbx_maptbx_ext.so.0.0.1'
+    'lib/cctbx_maptbx_ext.so.0'->'lib/cctbx_maptbx_ext.so.0.0.1'
+    'lib/cctbx_maptbx_ext.so'->'lib/cctbx_maptbx_ext.so.0.0.1'
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/ramachandran.h: In instantiation of ‘scitbx::af::tiny<NumType, 3> mmtbx::geometry_restraints::target_phi_psi(const scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>&, const phi_psi_proxy&) [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/ramachandran.h:314:35:   required from here
+  314 |         r = target_phi_psi<double>(general_table, sites_cart, proxy);}
+      |             ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/ramachandran.h:269:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  269 |     for(int i=0; i<rama_table.size(); i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/ramachandran.h:284:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  284 |     for(int i=0; i<rama_table.size(); i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -15383,26 +15413,22 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/ramachandran.h: In instantiation of ‘scitbx::af::tiny<NumType, 3> mmtbx::geometry_restraints::target_phi_psi(const scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>&, const phi_psi_proxy&) [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/ramachandran.h:314:35:   required from here
-  314 |         r = target_phi_psi<double>(general_table, sites_cart, proxy);}
-      |             ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/ramachandran.h:269:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  269 |     for(int i=0; i<rama_table.size(); i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/ramachandran.h:284:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<scitbx::vec3<double>, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  284 |     for(int i=0; i<rama_table.size(); i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~
+g++ -o mmtbx/secondary_structure/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/secondary_structure/ext.cpp
+Create symlinks for: 'lib/mmtbx_geometry_shared_types_ext.so.0.0.1'
+    'lib/mmtbx_geometry_shared_types_ext.so.0'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1'
+    'lib/mmtbx_geometry_shared_types_ext.so'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_alignment_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_alignment_ext.so.0 mmtbx/alignment/alignment_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o mmtbx/tls/decompose_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/decompose_ext.cpp
 In file included from /usr/include/boost/assert.hpp:58,
-                 from /usr/include/boost/smart_ptr/shared_array.hpp:23,
-                 from /usr/include/boost/shared_array.hpp:17,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<mmtbx::geometry_restraints::reference_coordinate_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<mmtbx::geometry_restraints::reference_coordinate_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+                 from /usr/include/boost/format/parsing.hpp:21,
+                 from /usr/include/boost/format.hpp:50,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral.h:8:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<mmtbx::geometry_restraints::phi_psi_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<mmtbx::geometry_restraints::phi_psi_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::reference_coordinate_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::phi_psi_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
   130 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   131 |         w_t,
@@ -15411,14 +15437,49 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   133 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:61:25:   required from here
-   61 |         shared_w_t::wrap(
-      |         ~~~~~~~~~~~~~~~~^
-   62 |           "shared_reference_coordinate_proxy")
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:52:75:   required from here
+   52 |         scitbx::af::boost_python::shared_wrapper<phi_psi_proxy, rir>::wrap(
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
+   53 |           "shared_phi_psi_proxy")
+      |           ~~~~~~~~~~~~~~~~~~~~~~~                                          
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+g++ -o mmtbx/tls/tls_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/tls_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o mmtbx/tls/optimise_amplitudes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/optimise_amplitudes.cpp
+Create symlinks for: 'lib/mmtbx_alignment_ext.so.0.0.1'
+    'lib/mmtbx_alignment_ext.so.0'->'lib/mmtbx_alignment_ext.so.0.0.1'
+    'lib/mmtbx_alignment_ext.so'->'lib/mmtbx_alignment_ext.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_sphere_surface_sampling_ext.so.0 mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o mmtbx/tls/optimise_amplitudes_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/optimise_amplitudes_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/wyckoff.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/crystal/direct_space_asu.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/asu_cache.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/bond.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/reference_coordinate.h:2,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:13:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  100 |         for (int i=0; i<m.size(); ++i) {
+      |                       ~^~~~~~~~~
+Create symlinks for: 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1'
+    'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1'
+    'lib/mmtbx_geometry_sphere_surface_sampling_ext.so'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1'
+g++ -o mmtbx/tls/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/utils.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:14:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/proxy_select.h: In instantiation of ‘scitbx::af::shared<float_t> cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref<ElementType>&, const scitbx::af::const_ref<long unsigned int, scitbx::af::trivial_accessor>&) [with ProxyType = mmtbx::geometry_restraints::reference_coordinate_proxy]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:80:41:   required from here
+   80 |             cctbx::geometry_restraints::shared_proxy_remove, (
+      |                                         ^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<unsigned int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  187 |       if (match_ctr != i_seqs.size()) {
+      |           ~~~~~~~~~~^~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::initialize(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:47:5:   required from ‘cctbx::sgtbx::tensors::constraints<FloatType, tensor_t>::constraints(const scitbx::af::const_ref<cctbx::sgtbx::rt_mx>&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3<double>; std::size_t = long unsigned int]’
@@ -15440,18 +15501,16 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   185 |         for (int j = 0; j < tensor_t::size(); j++) {
       |                         ~~^~~~~~~~~~~~~~~~~~
-g++ -o mmtbx/tls/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/utils.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/libiotbx_pdb.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_pdb.so.0 iotbx/pdb/hybrid_36_c.o iotbx/pdb/hybrid_36_cpp.o iotbx/pdb/utils.o iotbx/pdb/write_utils.o iotbx/pdb/hierarchy.o iotbx/pdb/hierarchy_select.o iotbx/pdb/hierarchy_atoms.o iotbx/pdb/construct_hierarchy.o iotbx/pdb/overall_counts.o iotbx/pdb/hierarchy_write.o iotbx/pdb/atom_selection.o iotbx/pdb/input.o iotbx/pdb/input_write.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 In file included from /usr/include/boost/assert.hpp:58,
-                 from /usr/include/boost/format/parsing.hpp:21,
-                 from /usr/include/boost/format.hpp:50,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/geometry_restraints/dihedral.h:8:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<mmtbx::geometry_restraints::phi_psi_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<mmtbx::geometry_restraints::phi_psi_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+                 from /usr/include/boost/smart_ptr/shared_array.hpp:23,
+                 from /usr/include/boost/shared_array.hpp:17,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/cctbx/sgtbx/site_symmetry.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<mmtbx::geometry_restraints::reference_coordinate_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<mmtbx::geometry_restraints::reference_coordinate_proxy>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::phi_psi_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<float_t> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::reference_coordinate_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
   130 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   131 |         w_t,
@@ -15460,81 +15519,67 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   133 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:52:75:   required from here
-   52 |         scitbx::af::boost_python::shared_wrapper<phi_psi_proxy, rir>::wrap(
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
-   53 |           "shared_phi_psi_proxy")
-      |           ~~~~~~~~~~~~~~~~~~~~~~~                                          
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:61:25:   required from here
+   61 |         shared_w_t::wrap(
+      |         ~~~~~~~~~~~~~~~~^
+   62 |           "shared_reference_coordinate_proxy")
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o lib/mmtbx_geometry_shared_types_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_shared_types_ext.so.0 mmtbx/geometry/boost_python/shared_types_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_sphere_surface_sampling_ext.so.0 mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/mmtbx_geometry_shared_types_ext.so.0.0.1'
-    'lib/mmtbx_geometry_shared_types_ext.so.0'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1'
-    'lib/mmtbx_geometry_shared_types_ext.so'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1'
+g++ -o lib/mmtbx_building_loop_closure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_building_loop_closure_ext.so.0 mmtbx/building/loop_closure/ccd_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -liotbx_pdb -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o mmtbx/tls/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/tls/utils_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1'
-    'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1'
-    'lib/mmtbx_geometry_sphere_surface_sampling_ext.so'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1'
-g++ -o mmtbx/utils/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/utils/utils_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/libiotbx_pdb.so.0.0.1'
-    'lib/libiotbx_pdb.so.0'->'lib/libiotbx_pdb.so.0.0.1'
-    'lib/libiotbx_pdb.so'->'lib/libiotbx_pdb.so.0.0.1'
-g++ -o lib/mmtbx_building_loop_closure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_building_loop_closure_ext.so.0 mmtbx/building/loop_closure/ccd_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -liotbx_pdb -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/libmmtbx_masks.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libmmtbx_masks.so.0 mmtbx/masks/atom_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm
 Create symlinks for: 'lib/mmtbx_building_loop_closure_ext.so.0.0.1'
     'lib/mmtbx_building_loop_closure_ext.so.0'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1'
     'lib/mmtbx_building_loop_closure_ext.so'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1'
-g++ -o lib/iotbx_pdb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_ext.so.0 iotbx/pdb/ext.o iotbx/pdb/hybrid_36_bpl.o iotbx/pdb/common_residue_names_bpl.o iotbx/pdb/rna_dna_atom_names_bpl.o iotbx/pdb/input_bpl.o iotbx/pdb/xray_structure_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/libmmtbx_masks.so.0.0.1'
-    'lib/libmmtbx_masks.so.0'->'lib/libmmtbx_masks.so.0.0.1'
-    'lib/libmmtbx_masks.so'->'lib/libmmtbx_masks.so.0.0.1'
-g++ -o lib/mmtbx_dssp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dssp_ext.so.0 mmtbx/secondary_structure/dssp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/mmtbx_dssp_ext.so.0.0.1'
-    'lib/mmtbx_dssp_ext.so.0'->'lib/mmtbx_dssp_ext.so.0.0.1'
-    'lib/mmtbx_dssp_ext.so'->'lib/mmtbx_dssp_ext.so.0.0.1'
+g++ -o mmtbx/utils/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/utils/utils_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o mmtbx/validation/ramachandran/rama_eval_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/validation/ramachandran/rama_eval_bpl.cpp
-Create symlinks for: 'lib/iotbx_pdb_ext.so.0.0.1'
-    'lib/iotbx_pdb_ext.so.0'->'lib/iotbx_pdb_ext.so.0.0.1'
-    'lib/iotbx_pdb_ext.so'->'lib/iotbx_pdb_ext.so.0.0.1'
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_cartesian_restraints_ext.so.0 mmtbx/ncs/cartesian_restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1'
+    'lib/mmtbx_ncs_cartesian_restraints_ext.so.0'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1'
+    'lib/mmtbx_ncs_cartesian_restraints_ext.so'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1'
 g++ -o omptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/omptbx/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_secondary_structure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_secondary_structure_ext.so.0 mmtbx/secondary_structure/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/iotbx_detectors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_ext.so.0 iotbx/detectors/detectors_ext.o iotbx/detectors/image_divider.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/mmtbx_secondary_structure_ext.so.0.0.1'
-    'lib/mmtbx_secondary_structure_ext.so.0'->'lib/mmtbx_secondary_structure_ext.so.0.0.1'
-    'lib/mmtbx_secondary_structure_ext.so'->'lib/mmtbx_secondary_structure_ext.so.0.0.1'
+g++ -o lib/libmmtbx_masks.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libmmtbx_masks.so.0 mmtbx/masks/atom_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm
+Create symlinks for: 'lib/libmmtbx_masks.so.0.0.1'
+    'lib/libmmtbx_masks.so.0'->'lib/libmmtbx_masks.so.0.0.1'
+    'lib/libmmtbx_masks.so'->'lib/libmmtbx_masks.so.0.0.1'
+g++ -o lib/mmtbx_mosaic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_mosaic_ext.so.0 mmtbx/bulk_solvent/mosaic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o rstbx/array_family/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/array_family/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/iotbx_detectors_ext.so.0.0.1'
-    'lib/iotbx_detectors_ext.so.0'->'lib/iotbx_detectors_ext.so.0.0.1'
-    'lib/iotbx_detectors_ext.so'->'lib/iotbx_detectors_ext.so.0.0.1'
+Create symlinks for: 'lib/mmtbx_mosaic_ext.so.0.0.1'
+    'lib/mmtbx_mosaic_ext.so.0'->'lib/mmtbx_mosaic_ext.so.0.0.1'
+    'lib/mmtbx_mosaic_ext.so'->'lib/mmtbx_mosaic_ext.so.0.0.1'
 g++ -o rstbx/array_family/flex_rstbx_arrays.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/array_family/flex_rstbx_arrays.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_den_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_den_restraints_ext.so.0 mmtbx/den/boost_python/den_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/mmtbx_secondary_structure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_secondary_structure_ext.so.0 mmtbx/secondary_structure/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o rstbx/bandpass/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/bandpass/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/src -Irstbx/bandpass/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_cartesian_restraints_ext.so.0 mmtbx/ncs/cartesian_restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/mmtbx_hydrogens_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_hydrogens_ext.so.0 mmtbx/hydrogens/hydrogens_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/mmtbx_hydrogens_ext.so.0.0.1'
-    'lib/mmtbx_hydrogens_ext.so.0'->'lib/mmtbx_hydrogens_ext.so.0.0.1'
-    'lib/mmtbx_hydrogens_ext.so'->'lib/mmtbx_hydrogens_ext.so.0.0.1'
-Create symlinks for: 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1'
-    'lib/mmtbx_ncs_cartesian_restraints_ext.so.0'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1'
-    'lib/mmtbx_ncs_cartesian_restraints_ext.so'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1'
+Create symlinks for: 'lib/mmtbx_secondary_structure_ext.so.0.0.1'
+    'lib/mmtbx_secondary_structure_ext.so.0'->'lib/mmtbx_secondary_structure_ext.so.0.0.1'
+    'lib/mmtbx_secondary_structure_ext.so'->'lib/mmtbx_secondary_structure_ext.so.0.0.1'
+Create symlinks for: 'lib/mmtbx_den_restraints_ext.so.0.0.1'
+    'lib/mmtbx_den_restraints_ext.so.0'->'lib/mmtbx_den_restraints_ext.so.0.0.1'
+    'lib/mmtbx_den_restraints_ext.so'->'lib/mmtbx_den_restraints_ext.so.0.0.1'
 g++ -o rstbx/bpcx/detector_model/detector_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bpcx/detector_model/detector_model_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o rstbx/bpcx/detector_model/sensor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bpcx/detector_model/sensor.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o rstbx/diffraction/fastbragg/fastbragg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_mosaic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_mosaic_ext.so.0 mmtbx/bulk_solvent/mosaic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/mmtbx_mosaic_ext.so.0.0.1'
-    'lib/mmtbx_mosaic_ext.so.0'->'lib/mmtbx_mosaic_ext.so.0.0.1'
-    'lib/mmtbx_mosaic_ext.so'->'lib/mmtbx_mosaic_ext.so.0.0.1'
+g++ -o lib/mmtbx_hydrogens_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_hydrogens_ext.so.0 mmtbx/hydrogens/hydrogens_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/mmtbx_f_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_f_model_ext.so.0 mmtbx/f_model/f_model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/mmtbx_hydrogens_ext.so.0.0.1'
+    'lib/mmtbx_hydrogens_ext.so.0'->'lib/mmtbx_hydrogens_ext.so.0.0.1'
+    'lib/mmtbx_hydrogens_ext.so'->'lib/mmtbx_hydrogens_ext.so.0.0.1'
+Create symlinks for: 'lib/mmtbx_f_model_ext.so.0.0.1'
+    'lib/mmtbx_f_model_ext.so.0'->'lib/mmtbx_f_model_ext.so.0.0.1'
+    'lib/mmtbx_f_model_ext.so'->'lib/mmtbx_f_model_ext.so.0.0.1'
+ar rc probe/lib/libprobelib.a mmtbx/probe/Scoring.o mmtbx/probe/DotSpheres.o mmtbx/probe/SpatialQuery.o
 g++ -o rstbx/diffraction/fastbragg/fastbragg.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
@@ -15569,12 +15614,11 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o lib/omptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=omptbx_ext.so.0 omptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lomptbx -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/omptbx_ext.so.0.0.1'
-    'lib/omptbx_ext.so.0'->'lib/omptbx_ext.so.0.0.1'
-    'lib/omptbx_ext.so'->'lib/omptbx_ext.so.0.0.1'
 g++ -o rstbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o rstbx/indexing_api/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/indexing_api/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/src -Irstbx/indexing_api/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+ranlib probe/lib/libprobelib.a
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -15685,7 +15729,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o rstbx/indexing_api/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/indexing_api/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/src -Irstbx/indexing_api/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp
+g++ -o rstbx/apps/integration_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/apps/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/src -Irstbx/apps/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/integration_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa<int, scitbx::af::c_grid<2> > rstbx::diffraction::fastbragg::detector::intdata()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain<double, scitbx::af::c_grid<2> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int count = 0; count < raw.size(); ++count){
@@ -15710,54 +15755,34 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   305 |         for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){
       |                             ~~~~~~~~~^~~~~~~~~~~~~~~~
-ar rc probe/lib/libprobelib.a mmtbx/probe/Scoring.o mmtbx/probe/DotSpheres.o mmtbx/probe/SpatialQuery.o
-g++ -o lib/mmtbx_f_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_f_model_ext.so.0 mmtbx/f_model/f_model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-ranlib probe/lib/libprobelib.a
-g++ -o rstbx/apps/integration_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/apps/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/src -Irstbx/apps/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/integration_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_den_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_den_restraints_ext.so.0 mmtbx/den/boost_python/den_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/mmtbx_f_model_ext.so.0.0.1'
-    'lib/mmtbx_f_model_ext.so.0'->'lib/mmtbx_f_model_ext.so.0.0.1'
-    'lib/mmtbx_f_model_ext.so'->'lib/mmtbx_f_model_ext.so.0.0.1'
-g++ -o lib/mmtbx_tls_decompose_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_decompose_ext.so.0 mmtbx/tls/decompose_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/mmtbx_den_restraints_ext.so.0.0.1'
-    'lib/mmtbx_den_restraints_ext.so.0'->'lib/mmtbx_den_restraints_ext.so.0.0.1'
-    'lib/mmtbx_den_restraints_ext.so'->'lib/mmtbx_den_restraints_ext.so.0.0.1'
-Create symlinks for: 'lib/mmtbx_tls_decompose_ext.so.0.0.1'
-    'lib/mmtbx_tls_decompose_ext.so.0'->'lib/mmtbx_tls_decompose_ext.so.0.0.1'
-    'lib/mmtbx_tls_decompose_ext.so'->'lib/mmtbx_tls_decompose_ext.so.0.0.1'
 g++ -o rstbx/simage/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/simage/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/src -Irstbx/simage/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o rstbx/simulation/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/simulation/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/src -Irstbx/simulation/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o rstbx/symmetry/constraints/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/symmetry/constraints/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/symmetry/constraints/src -Irstbx/symmetry/constraints/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/symmetry/constraints/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/symmetry/constraints/ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/omptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=omptbx_ext.so.0 omptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lomptbx -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/mmtbx_ncs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_ext.so.0 mmtbx/ncs/tncs_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/array_family/boost_python/flex_grid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_grid.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/array_family/boost_python/flex_bool.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/omptbx_ext.so.0.0.1'
+    'lib/omptbx_ext.so.0'->'lib/omptbx_ext.so.0.0.1'
+    'lib/omptbx_ext.so'->'lib/omptbx_ext.so.0.0.1'
+g++ -o rstbx/simulation/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/simulation/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/src -Irstbx/simulation/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/ext.cpp
 Create symlinks for: 'lib/mmtbx_ncs_ext.so.0.0.1'
     'lib/mmtbx_ncs_ext.so.0'->'lib/mmtbx_ncs_ext.so.0.0.1'
     'lib/mmtbx_ncs_ext.so'->'lib/mmtbx_ncs_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_size_t.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_tls_decompose_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_decompose_ext.so.0 mmtbx/tls/decompose_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/mmtbx_rsr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rsr_ext.so.0 mmtbx/rsr/rsr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o rstbx/symmetry/constraints/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -Irstbx/symmetry/constraints/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/symmetry/constraints/src -Irstbx/symmetry/constraints/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/symmetry/constraints/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/symmetry/constraints/ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/mmtbx_rsr_ext.so.0.0.1'
     'lib/mmtbx_rsr_ext.so.0'->'lib/mmtbx_rsr_ext.so.0.0.1'
     'lib/mmtbx_rsr_ext.so'->'lib/mmtbx_rsr_ext.so.0.0.1'
+Create symlinks for: 'lib/mmtbx_tls_decompose_ext.so.0.0.1'
+    'lib/mmtbx_tls_decompose_ext.so.0'->'lib/mmtbx_tls_decompose_ext.so.0.0.1'
+    'lib/mmtbx_tls_decompose_ext.so'->'lib/mmtbx_tls_decompose_ext.so.0.0.1'
 g++ -o lib/dxtbx_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_model_ext.so.0 dxtbx/src/dxtbx/model/boost_python/beam.o dxtbx/src/dxtbx/model/boost_python/spectrum.o dxtbx/src/dxtbx/model/boost_python/goniometer.o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o dxtbx/src/dxtbx/model/boost_python/panel.o dxtbx/src/dxtbx/model/boost_python/detector.o dxtbx/src/dxtbx/model/boost_python/scan.o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o dxtbx/src/dxtbx/model/boost_python/crystal.o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o dxtbx/src/dxtbx/model/boost_python/experiment.o dxtbx/src/dxtbx/model/boost_python/experiment_list.o dxtbx/src/dxtbx/model/boost_python/model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5
-g++ -o lib/mmtbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_masks_ext.so.0 mmtbx/masks/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_masks -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/array_family/boost_python/flex_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp:10:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/parameters.h: In constructor ‘rstbx::bandpass::active_area_filter::active_area_filter(scitbx::af::shared<int>)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/parameters.h:100:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   100 |       for (int i=0; i < tiles.size()/4; ++i){
       |                     ~~^~~~~~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
@@ -15783,10 +15808,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/subpixel_joint_model.h:31:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    31 |       for (int ixx=0; ixx< rotations_deg.size(); ++ixx){
       |                       ~~~^~~~~~~~~~~~~~~~~~~~~~
+g++ -o lib/mmtbx_pair_interaction_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_pair_interaction_ext.so.0 mmtbx/pair_interaction/interaction_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::prescreen_indices(const double&)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp:46:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    46 |       for (int idx = 0; idx < P.indices.size(); ++idx){
       |                         ~~~~^~~~~~~~~~~~~~~~~~
+g++ -o lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_optimise_amplitudes_ext.so.0 mmtbx/tls/optimise_amplitudes.o mmtbx/tls/optimise_amplitudes_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared<double> rstbx::bandpass::use_case_bp3::selected_partialities() const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp:93:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::vec3<double> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    93 |       for (int idx = 0; idx < lo_E_limit.size(); ++idx){
@@ -15846,6 +15873,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp:933:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   933 |     for (int idx = 0; idx < indices.size(); ++idx){
       |                       ~~~~^~~~~~~~~~~~~~~~
+g++ -o scitbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = resolution_limited_pixel_accept_policy]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp:616:87:   required from here
   616 |       enclosed_pixels_and_margin_pixels_detail<resolution_limited_pixel_accept_policy>();
@@ -15860,23 +15888,21 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::vec3<double> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   631 |       for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){
       |                         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-Create symlinks for: 'lib/mmtbx_masks_ext.so.0.0.1'
-    'lib/mmtbx_masks_ext.so.0'->'lib/mmtbx_masks_ext.so.0.0.1'
-    'lib/mmtbx_masks_ext.so'->'lib/mmtbx_masks_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_float.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_pair_interaction_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_pair_interaction_ext.so.0 mmtbx/pair_interaction/interaction_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1'
+    'lib/mmtbx_tls_optimise_amplitudes_ext.so.0'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1'
+    'lib/mmtbx_tls_optimise_amplitudes_ext.so'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1'
 Create symlinks for: 'lib/mmtbx_pair_interaction_ext.so.0.0.1'
     'lib/mmtbx_pair_interaction_ext.so.0'->'lib/mmtbx_pair_interaction_ext.so.0.0.1'
     'lib/mmtbx_pair_interaction_ext.so'->'lib/mmtbx_pair_interaction_ext.so.0.0.1'
-g++ -o lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_optimise_amplitudes_ext.so.0 mmtbx/tls/optimise_amplitudes.o mmtbx/tls/optimise_amplitudes_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/array_family/boost_python/flex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp
+g++ -o lib/dxtbx_masking_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_masking_ext.so.0 dxtbx/src/dxtbx/masking/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5
+g++ -o lib/mmtbx_max_lik_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_max_lik_ext.so.0 mmtbx/max_lik/max_lik_ext.o mmtbx/max_lik/max_lik.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/mmtbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_masks_ext.so.0 mmtbx/masks/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_masks -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/array_family/boost_python/flex_grid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_grid.cpp
+g++ -o scitbx/array_family/boost_python/flex_bool.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1'
-    'lib/mmtbx_tls_optimise_amplitudes_ext.so.0'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1'
-    'lib/mmtbx_tls_optimise_amplitudes_ext.so'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_double_matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/boost_python/flex_size_t.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:10:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa<int, scitbx::af::c_grid<2> > rstbx::diffraction::fastbragg::detector::intdata()’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain<double, scitbx::af::c_grid<2> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
@@ -15902,10 +15928,22 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   176 |     for (int i = 0; i < miller.size(); ++i){
       |                     ~~^~~~~~~~~~~~~~~
+g++ -o scitbx/array_family/boost_python/flex_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   305 |         for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){
       |                             ~~~~~~~~~^~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/mmtbx_masks_ext.so.0.0.1'
+    'lib/mmtbx_masks_ext.so.0'->'lib/mmtbx_masks_ext.so.0.0.1'
+    'lib/mmtbx_masks_ext.so'->'lib/mmtbx_masks_ext.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/boost_python/flex_float.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp
+Create symlinks for: 'lib/mmtbx_max_lik_ext.so.0.0.1'
+    'lib/mmtbx_max_lik_ext.so.0'->'lib/mmtbx_max_lik_ext.so.0.0.1'
+    'lib/mmtbx_max_lik_ext.so'->'lib/mmtbx_max_lik_ext.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/boost_python/flex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared<float_t> rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = scitbx::vec3<double>; MillerConversionPolicy = rstbx::diffraction::fastbragg::vec3_double_miller_index_policy]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:134:11:   required from here
   127 |     class_<fast_bragg_simulation>("fast_bragg_simulation",init<>())
@@ -15968,17 +16006,105 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   456 |         for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){
       |                             ~~~~~~~~~^~~~~~~~~~~~~~~~
-g++ -o lib/mmtbx_reference_coordinate_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reference_coordinate_ext.so.0 mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/rstbx_bpcx_detector_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bpcx_detector_model_ext.so.0 rstbx/bpcx/detector_model/detector_model_ext.o rstbx/bpcx/detector_model/sensor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/dxtbx_masking_ext.so.0.0.1'
+    'lib/dxtbx_masking_ext.so.0'->'lib/dxtbx_masking_ext.so.0.0.1'
+    'lib/dxtbx_masking_ext.so'->'lib/dxtbx_masking_ext.so.0.0.1'
+g++ -o scitbx/array_family/boost_python/flex_double_matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/boost_python/flex_complex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_rotamer_fit_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rotamer_fit_ext.so.0 mmtbx/rotamer/fit_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/mmtbx_validation_ramachandran_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_validation_ramachandran_ext.so.0 mmtbx/validation/ramachandran/rama_eval_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/array_family/boost_python/flex_std_string.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/mmtbx_rotamer_fit_ext.so.0.0.1'
+    'lib/mmtbx_rotamer_fit_ext.so.0'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1'
+    'lib/mmtbx_rotamer_fit_ext.so'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1'
+g++ -o scitbx/array_family/boost_python/flex_random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_random.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/real_to_complex.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/directional_fft.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/dps_core.h:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/indexing_api.h:9,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:4:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |     for (i = 0; red_n > 1 && i < opt_factors.size(); i++) {
+      |                              ~~^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   67 |     for (i = 0; i < opt_factors.size(); i++) {
+      |                 ~~^~~~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/mmtbx_validation_ramachandran_ext.so.0.0.1'
+    'lib/mmtbx_validation_ramachandran_ext.so.0'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1'
+    'lib/mmtbx_validation_ramachandran_ext.so'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1'
+g++ -o scitbx/array_family/boost_python/flex_sort.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sort.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/indexing_api.h:11:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
+  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  367 |         for (std::size_t y = y0; y < y1; ++y) {
+      |                                  ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  368 |           for (std::size_t x = x0; x < x1; ++x) {
+      |                                    ~~^~~~
+g++ -o lib/mmtbx_reference_coordinate_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reference_coordinate_ext.so.0 mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘void indexing_api::rayleigh_cpp::estimate_parameters_from_cdf(scitbx::af::shared<double>, scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:59:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   59 |     for (int i=0; i < x_data.size(); ++i){
+      |                   ~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared<double> indexing_api::rayleigh_cpp::pdf(scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:80:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   80 |     for (int i = 0; i < x.size(); ++i){
+      |                     ~~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared<double> indexing_api::rayleigh_cpp::cdf(scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:96:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   96 |     for (int i = 0; i < x.size(); ++i){
+      |                     ~~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared<double> indexing_api::rayleigh_cpp::d_cdf_d_sigma(scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  113 |     for (int i = 0; i < x.size(); ++i){
+      |                     ~~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared<double> indexing_api::rayleigh_cpp::gradients(scitbx::af::shared<double>, const int&, scitbx::af::shared<double>)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  129 |     for (int i = 0; i < x.size(); ++i){
+      |                     ~~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:135:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  135 |     for (int i = 0; i < gradients.size(); ++i){
+      |                     ~~^~~~~~~~~~~~~~~~~~
+Create symlinks for: 'lib/dxtbx_model_ext.so.0.0.1'
+    'lib/dxtbx_model_ext.so.0'->'lib/dxtbx_model_ext.so.0.0.1'
+    'lib/dxtbx_model_ext.so'->'lib/dxtbx_model_ext.so.0.0.1'
 Create symlinks for: 'lib/mmtbx_reference_coordinate_ext.so.0.0.1'
     'lib/mmtbx_reference_coordinate_ext.so.0'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1'
     'lib/mmtbx_reference_coordinate_ext.so'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_complex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp
+g++ -o scitbx/array_family/boost_python/flex_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_histogram.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/rstbx_bpcx_detector_model_ext.so.0.0.1'
-    'lib/rstbx_bpcx_detector_model_ext.so.0'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1'
-    'lib/rstbx_bpcx_detector_model_ext.so'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1'
+g++ -o scitbx/array_family/boost_python/flex_weighted_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_weighted_histogram.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/boost_python/flex_mean_and_variance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mean_and_variance.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/ext.cpp:2:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/image_simple.hpp: In member function ‘rstbx::simage::image_simple& rstbx::simage::image_simple::compute(const cctbx::uctbx::unit_cell&, const scitbx::af::const_ref<cctbx::miller::index<> >&, const scitbx::af::const_ref<double>&, const scitbx::mat3<double>&, double, double, int, double, scitbx::vec2<double>, scitbx::vec2<int>, unsigned int, double)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/image_simple.hpp:144:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
@@ -15987,8 +16113,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/image_simple.hpp:148:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   148 |               for(int j=0;j<=point_spread;j++) {
       |                           ~^~~~~~~~~~~~~~
-g++ -o scitbx/array_family/boost_python/flex_std_string.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/image_simple.hpp:10:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/ext.cpp: In function ‘std::string rstbx::simage::ext::combine_rgb_images(const boost::python::list&)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simage/ext.cpp:58:42: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
@@ -15997,12 +16121,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’
    59 |   if (!(condition)) { \
       |         ^~~~~~~~~
-Create symlinks for: 'lib/mmtbx_validation_ramachandran_ext.so.0.0.1'
-    'lib/mmtbx_validation_ramachandran_ext.so.0'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1'
-    'lib/mmtbx_validation_ramachandran_ext.so'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_random.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/array_family/boost_python/flex_sort.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sort.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/libdistl.h:81,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/distl.h:14,
@@ -16012,23 +16130,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/iotbx/detectors/scanbox.h:268:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   268 |      for (int tile = 0 ; tile < tile_count; ++tile){
       |                          ~~~~~^~~~~~~~~~~~
-g++ -o scitbx/array_family/boost_python/flex_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_histogram.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |         ^~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::append_ISmask(scitbx::af::shared<int>)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/stills/simple_integration.h:222:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   222 |       for (int i=0; i < mask.size(); i+=2){
@@ -16037,6 +16138,11 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/stills/simple_integration.h:273:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::vec3<double> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   273 |       for (int i=0; i<predicted.size(); ++i){
       |                     ~^~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/ext.cpp:11:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::shared<long unsigned int> rstbx::xfel1::select_proximal_indices(const int&, const double&, const double&, const cctbx::crystal_orientation&, const double&, const double&, const double&, const double&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  113 |     for (int x = 0; x < indices_all.size(); ++x){
+      |                     ~~^~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/stills/simple_integration.h:287:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<Distl::point>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   287 |           for (int p=0; p<spot.bodypixels.size(); ++p){
       |                         ~^~~~~~~~~~~~~~~~~~~~~~~
@@ -16054,6 +16160,16 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/stills/simple_integration.h:378:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::vec2<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   378 |       for (int isort=0; isort<increments_xy.size(); ++isort){
       |                         ~~~~~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::versa<int, scitbx::af::flex_grid<> > rstbx::xfel1::raw_diffraction(scitbx::af::shared<long unsigned int>, scitbx::af::versa<double, scitbx::af::flex_grid<> >, const size_t&, const double&, const double&, const double&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare]
+  178 |     for (int mcount=0; mcount<mosaic_impacts; ++mcount){
+      |                        ~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:230:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  230 |     for (int isel = 0; isel < selected.size(); ++isel){
+      |                        ~~~~~^~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:231:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<cctbx::crystal_orientation>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  231 |       for (int imos = 0; imos < mosaic_perturbations.size(); ++imos){
+      |                          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/stills/simple_integration.h:395:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<scitbx::vec3<double> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   395 |       for (int i=0; i<predicted.size(); ++i){
       |                     ~^~~~~~~~~~~~~~~~~
@@ -16073,101 +16189,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/apps/stills/simple_integration.h:638:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   638 |         for (int k=0; k<bkgrnd.size(); ++k){
       |                       ~^~~~~~~~~~~~~~
-Create symlinks for: 'lib/dxtbx_model_ext.so.0.0.1'
-    'lib/dxtbx_model_ext.so.0'->'lib/dxtbx_model_ext.so.0.0.1'
-    'lib/dxtbx_model_ext.so'->'lib/dxtbx_model_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_weighted_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_weighted_histogram.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_utils_ext.so.0 mmtbx/utils/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/mmtbx_rotamer_fit_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rotamer_fit_ext.so.0 mmtbx/rotamer/fit_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/iotbx_pdb_hierarchy_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_hierarchy_ext.so.0 iotbx/pdb/hierarchy_ext.o iotbx/pdb/hierarchy_atom_bpl.o iotbx/pdb/hierarchy_atoms_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
-  131 |     def( \
-      |     ~~~^~~
-  132 |       #pyname"_from_byte_str", \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  133 |       shared_from_byte_str<uIntType>, \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  134 |       (arg("byte_str"))); \
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
-  131 |     def( \
-      |     ~~~^~~
-  132 |       #pyname"_from_byte_str", \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  133 |       shared_from_byte_str<uIntType>, \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  134 |       (arg("byte_str"))); \
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
-  131 |     def( \
-      |     ~~~^~~
-  132 |       #pyname"_from_byte_str", \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  133 |       shared_from_byte_str<uIntType>, \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  134 |       (arg("byte_str"))); \
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
-  131 |     def( \
-      |     ~~~^~~
-  132 |       #pyname"_from_byte_str", \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  133 |       shared_from_byte_str<uIntType>, \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  134 |       (arg("byte_str"))); \
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/ext.cpp:11:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::shared<long unsigned int> rstbx::xfel1::select_proximal_indices(const int&, const double&, const double&, const cctbx::crystal_orientation&, const double&, const double&, const double&, const double&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<cctbx::miller::index<> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  113 |     for (int x = 0; x < indices_all.size(); ++x){
-      |                     ~~^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::versa<int, scitbx::af::flex_grid<> > rstbx::xfel1::raw_diffraction(scitbx::af::shared<long unsigned int>, scitbx::af::versa<double, scitbx::af::flex_grid<> >, const size_t&, const double&, const double&, const double&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare]
-  178 |     for (int mcount=0; mcount<mosaic_impacts; ++mcount){
-      |                        ~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:230:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  230 |     for (int isel = 0; isel < selected.size(); ++isel){
-      |                        ~~~~~^~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:231:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<cctbx::crystal_orientation>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  231 |       for (int imos = 0; imos < mosaic_perturbations.size(); ++imos){
-      |                          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o lib/rstbx_bpcx_detector_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bpcx_detector_model_ext.so.0 rstbx/bpcx/detector_model/detector_model_ext.o rstbx/bpcx/detector_model/sensor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp: In member function ‘const char* scitbx::af::boost_python::cost_of_m_handle_in_af_shared::operator()(unsigned int, unsigned int)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:367:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   367 |         for(int n=0; n < n_repeats; ++n) {
@@ -16178,158 +16200,10 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:383:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   383 |       for(int n=0; n < n_repeats; ++n) {
       |                    ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; e_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<long unsigned int>; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/bits/stl_function.h:1435,
-                 from /usr/include/c++/14/functional:49,
-                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
-                 from /usr/include/boost/function/detail/prologue.hpp:15,
-                 from /usr/include/boost/function/function_template.hpp:13,
-                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
-                 from /usr/include/boost/function/function0.hpp:11,
-                 from /usr/include/boost/python/errors.hpp:13,
-                 from /usr/include/boost/python/handle.hpp:11,
-                 from /usr/include/boost/python/to_python_value.hpp:14,
-                 from /usr/include/boost/python/default_call_policies.hpp:10,
-                 from /usr/include/boost/python/make_function.hpp:10,
-                 from /usr/include/boost/python/def.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; e_t = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<long unsigned int>; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-Create symlinks for: 'lib/mmtbx_rotamer_fit_ext.so.0.0.1'
-    'lib/mmtbx_rotamer_fit_ext.so.0'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1'
-    'lib/mmtbx_rotamer_fit_ext.so'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1'
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; e_t = unsigned char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<unsigned char>; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; e_t = unsigned char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<unsigned char>; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-Create symlinks for: 'lib/mmtbx_utils_ext.so.0.0.1'
-    'lib/mmtbx_utils_ext.so.0'->'lib/mmtbx_utils_ext.so.0.0.1'
-    'lib/mmtbx_utils_ext.so'->'lib/mmtbx_utils_ext.so.0.0.1'
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >; e_t = short unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<short unsigned int>; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >; e_t = short unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<short unsigned int>; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >; e_t = unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<unsigned int>; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >; e_t = unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<unsigned int>; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-g++ -o scitbx/array_family/boost_python/flex_mean_and_variance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mean_and_variance.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/rstbx_bpcx_detector_model_ext.so.0.0.1'
+    'lib/rstbx_bpcx_detector_model_ext.so.0'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1'
+    'lib/rstbx_bpcx_detector_model_ext.so'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1'
 g++ -o scitbx/array_family/boost_python/flex_median.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
@@ -16350,140 +16224,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/selections.h:156:7: note: in expansion of macro ‘SCITBX_ASSERT’
   156 |       SCITBX_ASSERT(iselection[i] < selectee_size);
       |       ^~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |         ^~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/real_to_complex.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/directional_fft.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/dps_core/dps_core.h:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/indexing_api.h:9,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:4:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |     for (i = 0; red_n > 1 && i < opt_factors.size(); i++) {
-      |                              ~~^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   67 |     for (i = 0; i < opt_factors.size(); i++) {
-      |                 ~~^~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:22,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/detector.h:25,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/indexing_api.h:11:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  288 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  289 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  328 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  329 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  408 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  409 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2<double> dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2<double>) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  449 |       if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
-  450 |       if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1;
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |         ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref<bool, scitbx::af::c_grid<2> >) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  367 |         for (std::size_t y = y0; y < y1; ++y) {
-      |                                  ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  368 |           for (std::size_t x = x0; x < x1; ++x) {
-      |                                    ~~^~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘void indexing_api::rayleigh_cpp::estimate_parameters_from_cdf(scitbx::af::shared<double>, scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:59:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   59 |     for (int i=0; i < x_data.size(); ++i){
-      |                   ~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared<double> indexing_api::rayleigh_cpp::pdf(scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:80:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   80 |     for (int i = 0; i < x.size(); ++i){
-      |                     ~~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared<double> indexing_api::rayleigh_cpp::cdf(scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:96:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   96 |     for (int i = 0; i < x.size(); ++i){
-      |                     ~~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared<double> indexing_api::rayleigh_cpp::d_cdf_d_sigma(scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  113 |     for (int i = 0; i < x.size(); ++i){
-      |                     ~~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared<double> indexing_api::rayleigh_cpp::gradients(scitbx::af::shared<double>, const int&, scitbx::af::shared<double>)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  129 |     for (int i = 0; i < x.size(); ++i){
-      |                     ~~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/indexing_api/ext.cpp:135:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  135 |     for (int i = 0; i < gradients.size(); ++i){
-      |                     ~~^~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/cassert:44,
-                 from /usr/include/boost/move/detail/type_traits.hpp:33,
-                 from /usr/include/boost/move/traits.hpp:31,
-                 from /usr/include/boost/move/utility.hpp:30,
-                 from /usr/include/boost/optional/optional.hpp:59,
-                 from /usr/include/boost/optional.hpp:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  770 |         shared_plain<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
-  771 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  772 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_utils_ext.so.0 mmtbx/utils/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /usr/include/boost/assert.hpp:58,
                  from /usr/include/boost/smart_ptr/shared_ptr.hpp:25,
                  from /usr/include/boost/shared_ptr.hpp:17,
@@ -16518,34 +16260,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  774 |         shared<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~                        
-  775 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  776 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::tiny<int, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::tiny<int, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
   146 |         &convertible,
@@ -17266,9 +16980,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-Create symlinks for: 'lib/iotbx_pdb_hierarchy_ext.so.0.0.1'
-    'lib/iotbx_pdb_hierarchy_ext.so.0'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1'
-    'lib/iotbx_pdb_hierarchy_ext.so'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1'
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::tiny<unsigned int, 5>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::tiny<unsigned int, 5>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
   146 |         &convertible,
@@ -17461,7 +17172,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o scitbx/array_family/boost_python/flex_linear_interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_linear_interpolation.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::vec3<double>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::vec3<double>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
   146 |         &convertible,
@@ -17582,7 +17292,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/iotbx_pdb_hierarchy_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_hierarchy_ext.so.0 iotbx/pdb/hierarchy_ext.o iotbx/pdb/hierarchy_atom_bpl.o iotbx/pdb/hierarchy_atoms_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::vec2<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::vec2<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
   146 |         &convertible,
@@ -17775,6 +17485,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+Create symlinks for: 'lib/mmtbx_utils_ext.so.0.0.1'
+    'lib/mmtbx_utils_ext.so.0'->'lib/mmtbx_utils_ext.so.0.0.1'
+    'lib/mmtbx_utils_ext.so'->'lib/mmtbx_utils_ext.so.0.0.1'
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::tiny<scitbx::vec3<double>, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::tiny<scitbx::vec3<double>, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
   146 |         &convertible,
@@ -18015,34 +17728,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<unsigned char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<unsigned char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  770 |         shared_plain<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
-  771 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  772 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
+g++ -o scitbx/array_family/boost_python/flex_linear_interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_linear_interpolation.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::small<scitbx::vec2<double>, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::small<scitbx::vec2<double>, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’
   146 |         &convertible,
@@ -18067,7 +17753,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o scitbx/array_family/boost_python/flex_vec3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::small<scitbx::vec2<double>, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::small<scitbx::vec2<double>, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’
   146 |         &convertible,
@@ -18092,34 +17777,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<unsigned char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<unsigned char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  774 |         shared<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~                        
-  775 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  776 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::small<scitbx::vec3<double>, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::small<scitbx::vec3<double>, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’
   146 |         &convertible,
@@ -18144,7 +17801,261 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |         ^~~~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |         ^~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:4:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref<FloatType, scitbx::af::c_grid<2> >&) [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:119:74:   required from here
+  119 |   double (*matrix_norm_1)(const_ref<double, mat_grid> const &) = matrix::norm_1;
+      |                                                                          ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:16:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   16 |   for (int i=0; i<a.n_rows(); ++i) for (int j=0; j<a.n_columns(); ++j) {
+      |                 ~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:16:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   16 |   for (int i=0; i<a.n_rows(); ++i) for (int j=0; j<a.n_columns(); ++j) {
+      |                                                  ~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_inf(const scitbx::af::const_ref<FloatType, scitbx::af::c_grid<2> >&) [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:177:11:   required from here
+  145 |     class_f_t
+      |     ~~~~~~~~~
+  146 |       .def("is_square_matrix", is_square_matrix)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  147 |       .def("matrix_diagonal",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~
+  148 |         (shared<double>(*)(
+      |         ~~~~~~~~~~~~~~~~~~~
+  149 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal)
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  150 |       .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal<double>)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  151 |       .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal<double>)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  152 |       .def("matrix_diagonal_set_in_place",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  153 |         (void(*)(
+      |         ~~~~~~~~~
+  154 |           ref<double, c_grid<2> > const&,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  155 |           double const&)) matrix_diagonal_set_in_place,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  156 |             arg("value"))
+      |             ~~~~~~~~~~~~~
+  157 |       .def("matrix_diagonal_set_in_place",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  158 |         (void(*)(
+      |         ~~~~~~~~~
+  159 |           ref<double, c_grid<2> > const&,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  160 |           const_ref<double> const&)) matrix_diagonal_set_in_place,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  161 |             arg("diagonal"))
+      |             ~~~~~~~~~~~~~~~~
+  162 |       .def("matrix_diagonal_add_in_place",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  163 |         (void(*)(
+      |         ~~~~~~~~~
+  164 |           ref<double, c_grid<2> > const&,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  165 |           double const&)) matrix_diagonal_add_in_place,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  166 |             arg("value"))
+      |             ~~~~~~~~~~~~~
+  167 |       .def("matrix_diagonal_sum",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  168 |         (double(*)(
+      |         ~~~~~~~~~~~
+  169 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_sum)
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  170 |       .def("matrix_trace",
+      |       ~~~~~~~~~~~~~~~~~~~~
+  171 |         (double(*)(
+      |         ~~~~~~~~~~~
+  172 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_sum)
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  173 |       .def("matrix_diagonal_product",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  174 |         (double(*)(
+      |         ~~~~~~~~~~~
+  175 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_product)
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  176 |       .def("matrix_norm_1", matrix_norm_1)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  177 |       .def("matrix_norm_inf", matrix::norm_inf<double>)
+      |       ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:32:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   32 |   for (int i=0; i<a.n_rows(); ++i) {
+      |                 ~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:34:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   34 |     for (int j=0; j<a.n_columns(); ++j) {
+      |                   ~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_frobenius(const scitbx::af::const_ref<FloatType, scitbx::af::c_grid<2> >&) [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:178:11:   required from here
+  145 |     class_f_t
+      |     ~~~~~~~~~
+  146 |       .def("is_square_matrix", is_square_matrix)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  147 |       .def("matrix_diagonal",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~
+  148 |         (shared<double>(*)(
+      |         ~~~~~~~~~~~~~~~~~~~
+  149 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal)
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  150 |       .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal<double>)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  151 |       .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal<double>)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  152 |       .def("matrix_diagonal_set_in_place",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  153 |         (void(*)(
+      |         ~~~~~~~~~
+  154 |           ref<double, c_grid<2> > const&,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  155 |           double const&)) matrix_diagonal_set_in_place,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  156 |             arg("value"))
+      |             ~~~~~~~~~~~~~
+  157 |       .def("matrix_diagonal_set_in_place",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  158 |         (void(*)(
+      |         ~~~~~~~~~
+  159 |           ref<double, c_grid<2> > const&,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  160 |           const_ref<double> const&)) matrix_diagonal_set_in_place,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  161 |             arg("diagonal"))
+      |             ~~~~~~~~~~~~~~~~
+  162 |       .def("matrix_diagonal_add_in_place",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  163 |         (void(*)(
+      |         ~~~~~~~~~
+  164 |           ref<double, c_grid<2> > const&,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  165 |           double const&)) matrix_diagonal_add_in_place,
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  166 |             arg("value"))
+      |             ~~~~~~~~~~~~~
+  167 |       .def("matrix_diagonal_sum",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  168 |         (double(*)(
+      |         ~~~~~~~~~~~
+  169 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_sum)
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  170 |       .def("matrix_trace",
+      |       ~~~~~~~~~~~~~~~~~~~~
+  171 |         (double(*)(
+      |         ~~~~~~~~~~~
+  172 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_sum)
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  173 |       .def("matrix_diagonal_product",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  174 |         (double(*)(
+      |         ~~~~~~~~~~~
+  175 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_product)
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  176 |       .def("matrix_norm_1", matrix_norm_1)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  177 |       .def("matrix_norm_inf", matrix::norm_inf<double>)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  178 |       .def("matrix_norm_frobenius", matrix::norm_frobenius<double>)
+      |       ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:46:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   46 |   for (int k=0; k < a_ij.size(); ++k) norm_accu(a_ij[k]);
+      |                 ~~^~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |         ^~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |         ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::vec3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/memory:69,
+                 from /usr/include/boost/config/no_tr1/memory.hpp:21,
+                 from /usr/include/boost/get_pointer.hpp:14,
+                 from /usr/include/boost/python/object/pointer_holder.hpp:11,
+                 from /usr/include/boost/python/to_python_indirect.hpp:10,
+                 from /usr/include/boost/python/converter/arg_to_python.hpp:10,
+                 from /usr/include/boost/python/call.hpp:15,
+                 from /usr/include/boost/python/object_core.hpp:14,
+                 from /usr/include/boost/python/object.hpp:9,
+                 from /usr/include/boost/python/scope.hpp:9,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp:4:
+/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3<double>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3<double>*; _Size = long unsigned int; _Tp = scitbx::vec3<double>]’ declared here
+  312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
+      |     ^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
+  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
+      |                                                ^~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |         ^~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<bool, scitbx::af::flex_grid<> >; e_t = bool]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:429:8:   required from here
   429 |     def("first_index", f_w::first_index_a_s, (arg("value")));
@@ -18179,133 +18090,31 @@
 /usr/include/c++/14/backward/binders.h:172:5: note: declared here
   172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
       |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<short unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<short unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  770 |         shared_plain<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
-  771 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  772 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<short unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<short unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  774 |         shared<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~                        
-  775 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  776 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |         ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  770 |         shared_plain<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
-  771 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  772 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  774 |         shared<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~                        
-  775 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  776 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
+Create symlinks for: 'lib/iotbx_pdb_hierarchy_ext.so.0.0.1'
+    'lib/iotbx_pdb_hierarchy_ext.so.0'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1'
+    'lib/iotbx_pdb_hierarchy_ext.so'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1'
+g++ -o scitbx/array_family/boost_python/flex_vec3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘scitbx::af::flex<double>::type* scitbx::af::{anonymous}::from_list_or_tuple_of_lists_or_tuples(PyObject*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:138:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  138 |             if (PyList_GET_SIZE(row) != n_columns) {
+      |                                      ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:154:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  154 |             if (PyTuple_GET_SIZE(row) != n_columns) {
+      |                                       ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:190:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  190 |             if (PyList_GET_SIZE(row) != n_columns) {
+      |                                      ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:206:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  206 |             if (PyTuple_GET_SIZE(row) != n_columns) {
+      |                                       ^
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘std::string scitbx::af::{anonymous}::mathematica_form(const scitbx::af::const_ref<double, scitbx::af::flex_grid<> >&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:452:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain<long int, 10>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  452 |       for (int i=1; i<indices.size(); ++i) {
+      |                     ~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:454:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain<long int, 10>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  454 |         if (i != indices.size() - 1) o << ",";
+      |             ~~^~~~~~~~~~~~~~~~~~~~~
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -18355,61 +18164,128 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<float, scitbx::af::flex_grid<> >; e_t = float]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
-   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<float>; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/bits/stl_function.h:1435,
-                 from /usr/include/c++/14/functional:49,
-                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
-                 from /usr/include/boost/function/detail/prologue.hpp:15,
-                 from /usr/include/boost/function/function_template.hpp:13,
-                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
-                 from /usr/include/boost/function/function0.hpp:11,
-                 from /usr/include/boost/python/errors.hpp:13,
-                 from /usr/include/boost/python/handle.hpp:11,
-                 from /usr/include/boost/python/to_python_value.hpp:14,
-                 from /usr/include/boost/python/default_call_policies.hpp:10,
-                 from /usr/include/boost/python/make_function.hpp:10,
-                 from /usr/include/boost/python/def.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<float, scitbx::af::flex_grid<> >; e_t = float]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
-   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<float>; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:7:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref<ElementType>&) [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:365:26:   required from here
+  365 |     return matrix::norm_1(self);
+      |            ~~~~~~~~~~~~~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   25 |   for (int i=0; i<x.size(); ++i) result += std::abs(x[i]);
+      |                 ~^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
+  131 |     def( \
+      |     ~~~^~~
+  132 |       #pyname"_from_byte_str", \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  133 |       shared_from_byte_str<uIntType>, \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  134 |       (arg("byte_str"))); \
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
+  131 |     def( \
+      |     ~~~^~~
+  132 |       #pyname"_from_byte_str", \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  133 |       shared_from_byte_str<uIntType>, \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  134 |       (arg("byte_str"))); \
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
+  131 |     def( \
+      |     ~~~^~~
+  132 |       #pyname"_from_byte_str", \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  133 |       shared_from_byte_str<uIntType>, \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  134 |       (arg("byte_str"))); \
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+  131 |     def( \
+      |     ~~~^~~
+  132 |       #pyname"_from_byte_str", \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  133 |       shared_from_byte_str<uIntType>, \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  134 |       (arg("byte_str"))); \
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |         ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:536:8:   required from here
+  536 |     def(
+      |     ~~~^
+  537 |       "double_from_byte_str",
+      |       ~~~~~~~~~~~~~~~~~~~~~~~
+  538 |       shared_from_byte_str<double>,
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  539 |       (arg("byte_str")));
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = bool]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<bool, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<bool>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -18460,29 +18336,187 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15:   required from here
+  367 |     f_w::plain("bool")
+      |     ~~~~~~~~~~^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   89 |     for (int i=0;i<self.accessor().nd();i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = bool]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<bool, scitbx::af::flex_grid<> >]’
+  269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
+      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+  289 |         setitem_nd_slice(a, slices, b);
+      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<bool, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<bool>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  782 |       result
+      |       ~~~~~~ 
+  783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  784 |         .def(init<std::size_t, optional<ElementType const&> >())
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  785 |         .def(init<shared_plain<ElementType> const&>())
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  786 |         .def("element_size", element_size)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  787 |         .staticmethod("element_size")
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  788 |         .def("accessor", accessor)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  789 |         .def("nd", nd)
+      |         ~~~~~~~~~~~~~~
+  790 |         .def("is_0_based", is_0_based)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  791 |         .def("origin", origin)
+      |         ~~~~~~~~~~~~~~~~~~~~~~
+  792 |         .def("all", all)
+      |         ~~~~~~~~~~~~~~~~
+  793 |         .def("last", last_0)
+      |         ~~~~~~~~~~~~~~~~~~~~
+  794 |         .def("last", last_1)
+      |         ~~~~~~~~~~~~~~~~~~~~
+  795 |         .def("is_padded", is_padded)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  796 |         .def("focus", focus_0)
+      |         ~~~~~~~~~~~~~~~~~~~~~~
+  797 |         .def("focus", focus_1)
+      |         ~~~~~~~~~~~~~~~~~~~~~~
+  798 |         .def("focus_size_1d", focus_size_1d)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  799 |         .def("is_trivial_1d", is_trivial_1d)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  800 |         .def("shift_origin", shift_origin)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  801 |         .def("id", id)
+      |         ~~~~~~~~~~~~~~
+  802 |         .def("size", size)
+      |         ~~~~~~~~~~~~~~~~~~
+  803 |         .def("__len__", size)
+      |         ~~~~~~~~~~~~~~~~~~~~~
+  804 |         .def("__sizeof__", memory_footprint)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  805 |         .def("capacity", capacity)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  807 |         .def("__getitem__", getitem_1d_slice)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  808 |         .def("__getitem__", getitem_1d, GetitemReturnValuePolicy())
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  809 |         .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy())
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
+      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15:   required from here
+  367 |     f_w::plain("bool")
+      |     ~~~~~~~~~~^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  114 |     for (int i=0;i<self.accessor().nd();i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; e_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<long unsigned int>; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/bits/stl_function.h:1435,
+                 from /usr/include/c++/14/functional:49,
+                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
+                 from /usr/include/boost/function/detail/prologue.hpp:15,
+                 from /usr/include/boost/function/function_template.hpp:13,
+                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
+                 from /usr/include/boost/function/function0.hpp:11,
+                 from /usr/include/boost/python/errors.hpp:13,
+                 from /usr/include/boost/python/handle.hpp:11,
+                 from /usr/include/boost/python/to_python_value.hpp:14,
+                 from /usr/include/boost/python/default_call_policies.hpp:10,
+                 from /usr/include/boost/python/make_function.hpp:10,
+                 from /usr/include/boost/python/def.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >; e_t = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
   105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   89 |     for (int i=0;i<self.accessor().nd();i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<long unsigned int>; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<float, scitbx::af::flex_grid<> >; e_t = float]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
+   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<float>; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/bits/stl_function.h:1435,
+                 from /usr/include/c++/14/functional:49,
+                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
+                 from /usr/include/boost/function/detail/prologue.hpp:15,
+                 from /usr/include/boost/function/function_template.hpp:13,
+                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
+                 from /usr/include/boost/function/function0.hpp:11,
+                 from /usr/include/boost/python/errors.hpp:13,
+                 from /usr/include/boost/python/handle.hpp:11,
+                 from /usr/include/boost/python/to_python_value.hpp:14,
+                 from /usr/include/boost/python/default_call_policies.hpp:10,
+                 from /usr/include/boost/python/make_function.hpp:10,
+                 from /usr/include/boost/python/def.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<float, scitbx::af::flex_grid<> >; e_t = float]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
+   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<float>; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = bool]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = bool]’
+  119 |       detail::copy_to_slice_detail(self, slices, other);
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<bool, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<bool, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<bool>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -18541,30 +18575,492 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15:   required from here
+  367 |     f_w::plain("bool")
+      |     ~~~~~~~~~~^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   70 |           if (idx_a[j] < slices[j].stop) break;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; e_t = unsigned char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<unsigned char>; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >; e_t = unsigned char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<unsigned char>; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >; e_t = short unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<short unsigned int>; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >; e_t = short unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<short unsigned int>; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<double, scitbx::af::flex_grid<> >; e_t = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
+  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
+      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<double>; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/bits/stl_function.h:1435,
+                 from /usr/include/c++/14/functional:49,
+                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
+                 from /usr/include/boost/function/detail/prologue.hpp:15,
+                 from /usr/include/boost/function/function_template.hpp:13,
+                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
+                 from /usr/include/boost/function/function0.hpp:11,
+                 from /usr/include/boost/python/errors.hpp:13,
+                 from /usr/include/boost/python/handle.hpp:11,
+                 from /usr/include/boost/python/to_python_value.hpp:14,
+                 from /usr/include/boost/python/default_call_policies.hpp:10,
+                 from /usr/include/boost/python/make_function.hpp:10,
+                 from /usr/include/boost/python/def.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<double, scitbx::af::flex_grid<> >; e_t = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
+  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
+      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<double>; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3:   required from here
+  311 |     def( \
+      |     ~~~^~~
+  312 |       #pyname"_from_byte_str", \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  313 |       shared_from_byte_str<intType>, \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  314 |       (arg("byte_str"))); \
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >; e_t = unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<unsigned int>; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >; e_t = unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<unsigned int>; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3:   required from here
+  311 |     def( \
+      |     ~~~^~~
+  312 |       #pyname"_from_byte_str", \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  313 |       shared_from_byte_str<intType>, \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  314 |       (arg("byte_str"))); \
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = signed char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3:   required from here
+  311 |     def( \
+      |     ~~~^~~
+  312 |       #pyname"_from_byte_str", \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  313 |       shared_from_byte_str<intType>, \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  314 |       (arg("byte_str"))); \
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3:   required from here
+  311 |     def( \
+      |     ~~~^~~
+  312 |       #pyname"_from_byte_str", \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
+  313 |       shared_from_byte_str<intType>, \
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  314 |       (arg("byte_str"))); \
+      |       ~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
+   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
+      |     ^~~~~~~~~~~~~
+In file included from /usr/include/c++/14/cassert:44,
+                 from /usr/include/boost/move/detail/type_traits.hpp:33,
+                 from /usr/include/boost/move/traits.hpp:31,
+                 from /usr/include/boost/move/utility.hpp:30,
+                 from /usr/include/boost/optional/optional.hpp:59,
+                 from /usr/include/boost/optional.hpp:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<float>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<float>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  770 |         shared_plain<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
+  771 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  772 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
+   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<float>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<float>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  774 |         shared<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~                        
+  775 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  776 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
+   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+In file included from /usr/include/c++/14/cassert:44,
+                 from /usr/include/boost/move/detail/type_traits.hpp:33,
+                 from /usr/include/boost/move/traits.hpp:31,
+                 from /usr/include/boost/move/utility.hpp:30,
+                 from /usr/include/boost/optional/optional.hpp:59,
+                 from /usr/include/boost/optional.hpp:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  770 |         shared_plain<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
+  771 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  772 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
+  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
+      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  774 |         shared<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~                        
+  775 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  776 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
+  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
+      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared<std::__cxx11::basic_string<char> > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   24 |       while (i < size) {
+      |              ~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   25 |         while (i < size && data[i] != '\n' && data[i] != '\r') i++;
+      |                ~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   27 |         if (i < size) {
+      |             ~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   28 |           if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') {
+      |                                  ~~~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   46 |       if (j < size) {
+      |           ~~^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<int, scitbx::af::flex_grid<> >; e_t = int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  114 |     for (int i=0;i<self.accessor().nd();i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1048 |       return integer(python_name, flex_root_scope);
+      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3:   required from here
+  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<int>; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/bits/stl_function.h:1435,
+                 from /usr/include/c++/14/functional:49,
+                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
+                 from /usr/include/boost/function/detail/prologue.hpp:15,
+                 from /usr/include/boost/function/function_template.hpp:13,
+                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
+                 from /usr/include/boost/function/function0.hpp:11,
+                 from /usr/include/boost/python/errors.hpp:13,
+                 from /usr/include/boost/python/handle.hpp:11,
+                 from /usr/include/boost/python/to_python_value.hpp:14,
+                 from /usr/include/boost/python/default_call_policies.hpp:10,
+                 from /usr/include/boost/python/make_function.hpp:10,
+                 from /usr/include/boost/python/def.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<int, scitbx::af::flex_grid<> >; e_t = int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1048 |       return integer(python_name, flex_root_scope);
+      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3:   required from here
+  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<int>; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+In file included from /usr/include/c++/14/cassert:44,
+                 from /usr/include/boost/move/detail/type_traits.hpp:33,
+                 from /usr/include/boost/move/traits.hpp:31,
+                 from /usr/include/boost/move/utility.hpp:30,
+                 from /usr/include/boost/optional/optional.hpp:59,
+                 from /usr/include/boost/optional.hpp:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<std::complex<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<std::complex<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  770 |         shared_plain<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
+  771 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  772 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
+  117 |     f_w::numeric_common("complex_double", local_scope)
+      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::complex<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::complex<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  774 |         shared<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~                        
+  775 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  776 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
+  117 |     f_w::numeric_common("complex_double", local_scope)
+      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = bool]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = float]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<bool, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<bool>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -18615,20 +19111,29 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15:   required from here
-  367 |     f_w::plain("bool")
-      |     ~~~~~~~~~~^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
+   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = bool]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<bool, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = float]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<float, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<bool, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<bool>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -18687,20 +19192,83 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15:   required from here
-  367 |     f_w::plain("bool")
-      |     ~~~~~~~~~~^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
+   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = unsigned char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:4:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&) [with ElementType = scitbx::vec3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  175 |         resize(new_size, ElementType());
+      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3<double>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3<double>]’ declared here
+  165 |       void resize(size_type const& new_size, ElementType const& x) {
+      |            ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘<anonymous>’ declared here
+  175 |         resize(new_size, ElementType());
+      |                          ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long int, scitbx::af::flex_grid<> >; e_t = long int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1048 |       return integer(python_name, flex_root_scope);
+      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3:   required from here
+  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<long int>; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long int, scitbx::af::flex_grid<> >; e_t = long int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1048 |       return integer(python_name, flex_root_scope);
+      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3:   required from here
+  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<long int>; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -18751,29 +19319,29 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
+  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
+      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = unsigned char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<double, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -18832,43 +19400,32 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
+  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
+      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:4:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref<FloatType, scitbx::af::c_grid<2> >&) [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:119:74:   required from here
-  119 |   double (*matrix_norm_1)(const_ref<double, mat_grid> const &) = matrix::norm_1;
-      |                                                                          ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:16:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   16 |   for (int i=0; i<a.n_rows(); ++i) for (int j=0; j<a.n_columns(); ++j) {
-      |                 ~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:16:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   16 |   for (int i=0; i<a.n_rows(); ++i) for (int j=0; j<a.n_columns(); ++j) {
-      |                                                  ~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = bool]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = bool]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = float]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = float]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<bool, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<float, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<bool, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<bool>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -18927,19 +19484,29 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15:   required from here
-  367 |     f_w::plain("bool")
-      |     ~~~~~~~~~~^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
+   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = short unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = std::complex<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -18990,29 +19557,23 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
+  117 |     f_w::numeric_common("complex_double", local_scope)
+      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = short unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = std::complex<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -19071,249 +19632,141 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
+  117 |     f_w::numeric_common("complex_double", local_scope)
+      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  114 |     for (int i=0;i<self.accessor().nd();i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<signed char, scitbx::af::flex_grid<> >; e_t = signed char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1048 |       return integer(python_name, flex_root_scope);
+      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3:   required from here
+  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<signed char>; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<signed char, scitbx::af::flex_grid<> >; e_t = signed char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1048 |       return integer(python_name, flex_root_scope);
+      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3:   required from here
+  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<signed char>; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+In file included from /usr/include/c++/14/cassert:44,
+                 from /usr/include/boost/move/detail/type_traits.hpp:33,
+                 from /usr/include/boost/move/traits.hpp:31,
+                 from /usr/include/boost/move/utility.hpp:30,
+                 from /usr/include/boost/optional/optional.hpp:59,
+                 from /usr/include/boost/optional.hpp:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  770 |         shared_plain<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
+  771 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  772 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
   105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  114 |     for (int i=0;i<self.accessor().nd();i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_inf(const scitbx::af::const_ref<FloatType, scitbx::af::c_grid<2> >&) [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:177:11:   required from here
-  145 |     class_f_t
-      |     ~~~~~~~~~
-  146 |       .def("is_square_matrix", is_square_matrix)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  147 |       .def("matrix_diagonal",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~
-  148 |         (shared<double>(*)(
-      |         ~~~~~~~~~~~~~~~~~~~
-  149 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal)
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  150 |       .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal<double>)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  151 |       .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal<double>)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  152 |       .def("matrix_diagonal_set_in_place",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  153 |         (void(*)(
-      |         ~~~~~~~~~
-  154 |           ref<double, c_grid<2> > const&,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  155 |           double const&)) matrix_diagonal_set_in_place,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  156 |             arg("value"))
-      |             ~~~~~~~~~~~~~
-  157 |       .def("matrix_diagonal_set_in_place",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  158 |         (void(*)(
-      |         ~~~~~~~~~
-  159 |           ref<double, c_grid<2> > const&,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  160 |           const_ref<double> const&)) matrix_diagonal_set_in_place,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  161 |             arg("diagonal"))
-      |             ~~~~~~~~~~~~~~~~
-  162 |       .def("matrix_diagonal_add_in_place",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  163 |         (void(*)(
-      |         ~~~~~~~~~
-  164 |           ref<double, c_grid<2> > const&,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  165 |           double const&)) matrix_diagonal_add_in_place,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  166 |             arg("value"))
-      |             ~~~~~~~~~~~~~
-  167 |       .def("matrix_diagonal_sum",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  168 |         (double(*)(
-      |         ~~~~~~~~~~~
-  169 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_sum)
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  170 |       .def("matrix_trace",
-      |       ~~~~~~~~~~~~~~~~~~~~
-  171 |         (double(*)(
-      |         ~~~~~~~~~~~
-  172 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_sum)
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  173 |       .def("matrix_diagonal_product",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  174 |         (double(*)(
-      |         ~~~~~~~~~~~
-  175 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_product)
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  176 |       .def("matrix_norm_1", matrix_norm_1)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  177 |       .def("matrix_norm_inf", matrix::norm_inf<double>)
-      |       ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:32:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   32 |   for (int i=0; i<a.n_rows(); ++i) {
-      |                 ~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:34:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   34 |     for (int j=0; j<a.n_columns(); ++j) {
-      |                   ~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_frobenius(const scitbx::af::const_ref<FloatType, scitbx::af::c_grid<2> >&) [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:178:11:   required from here
-  145 |     class_f_t
-      |     ~~~~~~~~~
-  146 |       .def("is_square_matrix", is_square_matrix)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  147 |       .def("matrix_diagonal",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~
-  148 |         (shared<double>(*)(
-      |         ~~~~~~~~~~~~~~~~~~~
-  149 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal)
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  150 |       .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal<double>)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  151 |       .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal<double>)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  152 |       .def("matrix_diagonal_set_in_place",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  153 |         (void(*)(
-      |         ~~~~~~~~~
-  154 |           ref<double, c_grid<2> > const&,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  155 |           double const&)) matrix_diagonal_set_in_place,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  156 |             arg("value"))
-      |             ~~~~~~~~~~~~~
-  157 |       .def("matrix_diagonal_set_in_place",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  158 |         (void(*)(
-      |         ~~~~~~~~~
-  159 |           ref<double, c_grid<2> > const&,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  160 |           const_ref<double> const&)) matrix_diagonal_set_in_place,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  161 |             arg("diagonal"))
-      |             ~~~~~~~~~~~~~~~~
-  162 |       .def("matrix_diagonal_add_in_place",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  163 |         (void(*)(
-      |         ~~~~~~~~~
-  164 |           ref<double, c_grid<2> > const&,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  165 |           double const&)) matrix_diagonal_add_in_place,
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  166 |             arg("value"))
-      |             ~~~~~~~~~~~~~
-  167 |       .def("matrix_diagonal_sum",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  168 |         (double(*)(
-      |         ~~~~~~~~~~~
-  169 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_sum)
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  170 |       .def("matrix_trace",
-      |       ~~~~~~~~~~~~~~~~~~~~
-  171 |         (double(*)(
-      |         ~~~~~~~~~~~
-  172 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_sum)
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  173 |       .def("matrix_diagonal_product",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  174 |         (double(*)(
-      |         ~~~~~~~~~~~
-  175 |           const_ref<double, c_grid<2> > const&)) matrix_diagonal_product)
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  176 |       .def("matrix_norm_1", matrix_norm_1)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  177 |       .def("matrix_norm_inf", matrix::norm_inf<double>)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  178 |       .def("matrix_norm_frobenius", matrix::norm_frobenius<double>)
-      |       ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:46:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   46 |   for (int k=0; k < a_ij.size(); ++k) norm_accu(a_ij[k]);
-      |                 ~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
-  202 |       return copy_slice<e_t>(self, slices_simple);
-      |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
-  228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
-      |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  782 |       result
-      |       ~~~~~~ 
-  783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  784 |         .def(init<std::size_t, optional<ElementType const&> >())
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  785 |         .def(init<shared_plain<ElementType> const&>())
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  786 |         .def("element_size", element_size)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  787 |         .staticmethod("element_size")
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  788 |         .def("accessor", accessor)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  789 |         .def("nd", nd)
-      |         ~~~~~~~~~~~~~~
-  790 |         .def("is_0_based", is_0_based)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  791 |         .def("origin", origin)
-      |         ~~~~~~~~~~~~~~~~~~~~~~
-  792 |         .def("all", all)
-      |         ~~~~~~~~~~~~~~~~
-  793 |         .def("last", last_0)
-      |         ~~~~~~~~~~~~~~~~~~~~
-  794 |         .def("last", last_1)
-      |         ~~~~~~~~~~~~~~~~~~~~
-  795 |         .def("is_padded", is_padded)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  796 |         .def("focus", focus_0)
-      |         ~~~~~~~~~~~~~~~~~~~~~~
-  797 |         .def("focus", focus_1)
-      |         ~~~~~~~~~~~~~~~~~~~~~~
-  798 |         .def("focus_size_1d", focus_size_1d)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  799 |         .def("is_trivial_1d", is_trivial_1d)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  800 |         .def("shift_origin", shift_origin)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  801 |         .def("id", id)
-      |         ~~~~~~~~~~~~~~
-  802 |         .def("size", size)
-      |         ~~~~~~~~~~~~~~~~~~
-  803 |         .def("__len__", size)
-      |         ~~~~~~~~~~~~~~~~~~~~~
-  804 |         .def("__sizeof__", memory_footprint)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  805 |         .def("capacity", capacity)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
-      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<long unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  774 |         shared<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~                        
+  775 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  776 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
   105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   89 |     for (int i=0;i<self.accessor().nd();i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&) [with ElementType = cctbx::crystal_orientation]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  175 |         resize(new_size, ElementType());
+      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const cctbx::crystal_orientation&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = cctbx::crystal_orientation]’ declared here
+  165 |       void resize(size_type const& new_size, ElementType const& x) {
+      |            ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘<anonymous>’ declared here
+  175 |         resize(new_size, ElementType());
+      |                          ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = double]’
+  119 |       detail::copy_to_slice_detail(self, slices, other);
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<double, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -19372,37 +19825,63 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
+  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
+      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   70 |           if (idx_a[j] < slices[j].stop) break;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short int, scitbx::af::flex_grid<> >; e_t = short int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  963 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
-  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  114 |     for (int i=0;i<self.accessor().nd();i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/cassert:44,
-                 from /usr/include/boost/move/detail/type_traits.hpp:33,
-                 from /usr/include/boost/move/traits.hpp:31,
-                 from /usr/include/boost/move/utility.hpp:30,
-                 from /usr/include/boost/optional/optional.hpp:59,
-                 from /usr/include/boost/optional.hpp:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<float>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<float>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1048 |       return integer(python_name, flex_root_scope);
+      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3:   required from here
+  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<short int>; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short int, scitbx::af::flex_grid<> >; e_t = short int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  964 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1048 |       return integer(python_name, flex_root_scope);
+      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3:   required from here
+  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<short int>; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<unsigned char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<unsigned char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   769 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   770 |         shared_plain<ElementType>,
@@ -19411,26 +19890,26 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   772 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
-   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<float>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<float>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<unsigned char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<unsigned char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   773 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   774 |         shared<ElementType>,
@@ -19439,32 +19918,32 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   776 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
-   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = long unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = long unsigned int]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = std::complex<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = std::complex<double>]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -19523,29 +20002,176 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
+  117 |     f_w::numeric_common("complex_double", local_scope)
+      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   70 |           if (idx_a[j] < slices[j].stop) break;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<short unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<short unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  770 |         shared_plain<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
+  771 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  772 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
   105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   70 |           if (idx_a[j] < slices[j].stop) break;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<short unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<short unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  774 |         shared<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~                        
+  775 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  776 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  770 |         shared_plain<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
+  771 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  772 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<unsigned int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  774 |         shared<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~                        
+  775 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  776 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string<char>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:885:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  885 |         def("first_index", first_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
+  132 |     fw::ordered("std_string", scope())
+      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string<char> >; _Tp = __cxx11::basic_string<char>]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/bits/stl_function.h:1435,
+                 from /usr/include/c++/14/functional:49,
+                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
+                 from /usr/include/boost/function/detail/prologue.hpp:15,
+                 from /usr/include/boost/function/function_template.hpp:13,
+                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
+                 from /usr/include/boost/function/function0.hpp:11,
+                 from /usr/include/boost/python/errors.hpp:13,
+                 from /usr/include/boost/python/handle.hpp:11,
+                 from /usr/include/boost/python/to_python_value.hpp:14,
+                 from /usr/include/boost/python/default_call_policies.hpp:10,
+                 from /usr/include/boost/python/make_function.hpp:10,
+                 from /usr/include/boost/python/def.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string<char>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:886:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  886 |         def("last_index", last_index_a_s);
+      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
+  132 |     fw::ordered("std_string", scope())
+      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string<char> >; _Tp = __cxx11::basic_string<char>]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
+  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
+      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/usr/include/c++/14/backward/binders.h:172:5: note: declared here
+  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
+      |     ^~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = float]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -19596,29 +20222,29 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
-   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = float]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<float, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -19677,53 +20303,29 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
-   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::vec3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/memory:69,
-                 from /usr/include/boost/config/no_tr1/memory.hpp:21,
-                 from /usr/include/boost/get_pointer.hpp:14,
-                 from /usr/include/boost/python/object/pointer_holder.hpp:11,
-                 from /usr/include/boost/python/to_python_indirect.hpp:10,
-                 from /usr/include/boost/python/converter/arg_to_python.hpp:10,
-                 from /usr/include/boost/python/call.hpp:15,
-                 from /usr/include/boost/python/object_core.hpp:14,
-                 from /usr/include/boost/python/object.hpp:9,
-                 from /usr/include/boost/python/scope.hpp:9,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/bandpass/ext.cpp:4:
-/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3<double>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3<double>*; _Size = long unsigned int; _Tp = scitbx::vec3<double>]’ declared here
-  312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
-      |     ^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
-  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
-      |                                                ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = unsigned char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = unsigned char]’
-  119 |       detail::copy_to_slice_detail(self, slices, other);
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >]’
-  269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
-      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
-  289 |         setitem_nd_slice(a, slices, b);
-      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = unsigned char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+  202 |       return copy_slice<e_t>(self, slices_simple);
+      |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+  228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
+      |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -19773,14 +20375,6 @@
   805 |         .def("capacity", capacity)
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  807 |         .def("__getitem__", getitem_1d_slice)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  808 |         .def("__getitem__", getitem_1d, GetitemReturnValuePolicy())
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  809 |         .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy())
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
@@ -19794,32 +20388,17 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
   105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   70 |           if (idx_a[j] < slices[j].stop) break;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘scitbx::af::flex<double>::type* scitbx::af::{anonymous}::from_list_or_tuple_of_lists_or_tuples(PyObject*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:138:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  138 |             if (PyList_GET_SIZE(row) != n_columns) {
-      |                                      ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:154:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  154 |             if (PyTuple_GET_SIZE(row) != n_columns) {
-      |                                       ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:190:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  190 |             if (PyList_GET_SIZE(row) != n_columns) {
-      |                                      ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:206:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  206 |             if (PyTuple_GET_SIZE(row) != n_columns) {
-      |                                       ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = float]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = float]’
-  119 |       detail::copy_to_slice_detail(self, slices, other);
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<float, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   89 |     for (int i=0;i<self.accessor().nd();i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = unsigned char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -19878,38 +20457,29 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<float, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<float>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33:   required from here
-   12 |     flex_wrapper<float>::numeric("float", boost::python::scope())
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   70 |           if (idx_a[j] < slices[j].stop) break;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘std::string scitbx::af::{anonymous}::mathematica_form(const scitbx::af::const_ref<double, scitbx::af::flex_grid<> >&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:452:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain<long int, 10>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  452 |       for (int i=1; i<indices.size(); ++i) {
-      |                     ~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:454:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain<long int, 10>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  454 |         if (i != indices.size() - 1) o << ",";
-      |             ~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = short unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = short unsigned int]’
-  119 |       detail::copy_to_slice_detail(self, slices, other);
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >]’
-  269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
-      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
-  289 |         setitem_nd_slice(a, slices, b);
-      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  114 |     for (int i=0;i<self.accessor().nd();i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = short unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+  202 |       return copy_slice<e_t>(self, slices_simple);
+      |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+  228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
+      |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -19959,14 +20529,6 @@
   805 |         .def("capacity", capacity)
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  807 |         .def("__getitem__", getitem_1d_slice)
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  808 |         .def("__getitem__", getitem_1d, GetitemReturnValuePolicy())
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  809 |         .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy())
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
@@ -19980,28 +20542,17 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
   105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   70 |           if (idx_a[j] < slices[j].stop) break;
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref<ElementType>&) [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:365:26:   required from here
-  365 |     return matrix::norm_1(self);
-      |            ~~~~~~~~~~~~~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/norms.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   25 |   for (int i=0; i<x.size(); ++i) result += std::abs(x[i]);
-      |                 ~^~~~~~~~~
-g++ -o lib/mmtbx_max_lik_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_max_lik_ext.so.0 mmtbx/max_lik/max_lik_ext.o mmtbx/max_lik/max_lik.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = unsigned int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = unsigned int]’
-  119 |       detail::copy_to_slice_detail(self, slices, other);
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   89 |     for (int i=0;i<self.accessor().nd();i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = short unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -20060,224 +20611,29 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
   105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   70 |           if (idx_a[j] < slices[j].stop) break;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:536:8:   required from here
-  536 |     def(
-      |     ~~~^
-  537 |       "double_from_byte_str",
-      |       ~~~~~~~~~~~~~~~~~~~~~~~
-  538 |       shared_from_byte_str<double>,
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  539 |       (arg("byte_str")));
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-Create symlinks for: 'lib/mmtbx_max_lik_ext.so.0.0.1'
-    'lib/mmtbx_max_lik_ext.so.0'->'lib/mmtbx_max_lik_ext.so.0.0.1'
-    'lib/mmtbx_max_lik_ext.so'->'lib/mmtbx_max_lik_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_vec2_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<double, scitbx::af::flex_grid<> >; e_t = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
-  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
-      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<double>; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/bits/stl_function.h:1435,
-                 from /usr/include/c++/14/functional:49,
-                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
-                 from /usr/include/boost/function/detail/prologue.hpp:15,
-                 from /usr/include/boost/function/function_template.hpp:13,
-                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
-                 from /usr/include/boost/function/function0.hpp:11,
-                 from /usr/include/boost/python/errors.hpp:13,
-                 from /usr/include/boost/python/handle.hpp:11,
-                 from /usr/include/boost/python/to_python_value.hpp:14,
-                 from /usr/include/boost/python/default_call_policies.hpp:10,
-                 from /usr/include/boost/python/make_function.hpp:10,
-                 from /usr/include/boost/python/def.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<double, scitbx::af::flex_grid<> >; e_t = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
-  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
-      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<double>; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-g++ -o lib/mmtbx_ramachandran_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ramachandran_restraints_ext.so.0 mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |         ^~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |         ^~~~~~~~~~~~~
-g++ -o lib/rstbx_symmetry_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_symmetry_constraints_ext.so.0 rstbx/symmetry/constraints/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-In file included from /usr/include/c++/14/cassert:44,
-                 from /usr/include/boost/move/detail/type_traits.hpp:33,
-                 from /usr/include/boost/move/traits.hpp:31,
-                 from /usr/include/boost/move/utility.hpp:30,
-                 from /usr/include/boost/optional/optional.hpp:59,
-                 from /usr/include/boost/optional.hpp:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  770 |         shared_plain<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
-  771 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  772 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
-  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
-      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared<std::__cxx11::basic_string<char> > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   24 |       while (i < size) {
-      |              ~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   25 |         while (i < size && data[i] != '\n' && data[i] != '\r') i++;
-      |                ~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   27 |         if (i < size) {
-      |             ~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   28 |           if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') {
-      |                                  ~~~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   46 |       if (j < size) {
-      |           ~~^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  774 |         shared<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~                        
-  775 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  776 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  966 |       return numeric_common(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
-  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
-      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-Create symlinks for: 'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1'
-    'lib/mmtbx_ramachandran_restraints_ext.so.0'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1'
-    'lib/mmtbx_ramachandran_restraints_ext.so'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_vec3_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/rstbx_symmetry_constraints_ext.so.0.0.1'
-    'lib/rstbx_symmetry_constraints_ext.so.0'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1'
-    'lib/rstbx_symmetry_constraints_ext.so'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/flex_sym_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+  114 |     for (int i=0;i<self.accessor().nd();i++) {
+      |                  ~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -20328,29 +20684,29 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
-  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
-      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<double, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -20409,33 +20765,89 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
-  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
-      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-g++ -o lib/mmtbx_geometry_indexing_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_indexing_ext.so.0 mmtbx/geometry/boost_python/indexing_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = double]’
+In file included from /usr/include/c++/14/cassert:44,
+                 from /usr/include/boost/move/detail/type_traits.hpp:33,
+                 from /usr/include/boost/move/traits.hpp:31,
+                 from /usr/include/boost/move/utility.hpp:30,
+                 from /usr/include/boost/optional/optional.hpp:59,
+                 from /usr/include/boost/optional.hpp:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<std::__cxx11::basic_string<char> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<std::__cxx11::basic_string<char> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  770 |         shared_plain<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
+  771 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  772 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  888 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
+  132 |     fw::ordered("std_string", scope())
+      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::__cxx11::basic_string<char> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::__cxx11::basic_string<char> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  774 |         shared<ElementType>,
+      |         ~~~~~~~~~~~~~~~~~~~~                        
+  775 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  776 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  888 |       return plain(python_name)
+      |              ~~~~~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
+  132 |     fw::ordered("std_string", scope())
+      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = long unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = long unsigned int]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<double, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -20494,216 +20906,21 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<double, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<double>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1020 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42:   required from here
-  477 |     f_w::class_f_t class_f_t(f_w::numeric("double", scope()));
-      |                              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
-ar rc reduce/lib/libreduce2lib.a mmtbx/reduce/PositionReturn.o mmtbx/reduce/InteractionGraph.o mmtbx/reduce/Optimizers.o
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/rstbx/simulation/sim_xfel1.h:4:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&) [with ElementType = scitbx::vec3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  175 |         resize(new_size, ElementType());
-      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3<double>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3<double>]’ declared here
-  165 |       void resize(size_type const& new_size, ElementType const& x) {
-      |            ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘<anonymous>’ declared here
-  175 |         resize(new_size, ElementType());
-      |                          ^~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string<char>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:885:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  885 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
-  132 |     fw::ordered("std_string", scope())
-      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string<char> >; _Tp = __cxx11::basic_string<char>]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/bits/stl_function.h:1435,
-                 from /usr/include/c++/14/functional:49,
-                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
-                 from /usr/include/boost/function/detail/prologue.hpp:15,
-                 from /usr/include/boost/function/function_template.hpp:13,
-                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
-                 from /usr/include/boost/function/function0.hpp:11,
-                 from /usr/include/boost/python/errors.hpp:13,
-                 from /usr/include/boost/python/handle.hpp:11,
-                 from /usr/include/boost/python/to_python_value.hpp:14,
-                 from /usr/include/boost/python/default_call_policies.hpp:10,
-                 from /usr/include/boost/python/make_function.hpp:10,
-                 from /usr/include/boost/python/def.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string<char>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:886:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  886 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
-  132 |     fw::ordered("std_string", scope())
-      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string<char> >; _Tp = __cxx11::basic_string<char>]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-ranlib reduce/lib/libreduce2lib.a
-Create symlinks for: 'lib/mmtbx_geometry_indexing_ext.so.0.0.1'
-    'lib/mmtbx_geometry_indexing_ext.so.0'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1'
-    'lib/mmtbx_geometry_indexing_ext.so'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1'
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3:   required from here
-  311 |     def( \
-      |     ~~~^~~
-  312 |       #pyname"_from_byte_str", \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  313 |       shared_from_byte_str<intType>, \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  314 |       (arg("byte_str"))); \
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3:   required from here
-  311 |     def( \
-      |     ~~~^~~
-  312 |       #pyname"_from_byte_str", \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  313 |       shared_from_byte_str<intType>, \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  314 |       (arg("byte_str"))); \
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = signed char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3:   required from here
-  311 |     def( \
-      |     ~~~^~~
-  312 |       #pyname"_from_byte_str", \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  313 |       shared_from_byte_str<intType>, \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  314 |       (arg("byte_str"))); \
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-In file included from /usr/include/c++/14/cassert:44,
-                 from /usr/include/boost/move/detail/type_traits.hpp:33,
-                 from /usr/include/boost/move/traits.hpp:31,
-                 from /usr/include/boost/move/utility.hpp:30,
-                 from /usr/include/boost/optional/optional.hpp:59,
-                 from /usr/include/boost/optional.hpp:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<std::__cxx11::basic_string<char> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<std::__cxx11::basic_string<char> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  770 |         shared_plain<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
-  771 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  772 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  888 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
-  132 |     fw::ordered("std_string", scope())
-      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::__cxx11::basic_string<char> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::__cxx11::basic_string<char> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  774 |         shared<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~                        
-  775 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  776 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  888 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
-  132 |     fw::ordered("std_string", scope())
-      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared<ElementType> scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3:   required from here
-  311 |     def( \
-      |     ~~~^~~
-  312 |       #pyname"_from_byte_str", \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~
-  313 |       shared_from_byte_str<intType>, \
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-  314 |       (arg("byte_str"))); \
-      |       ~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare]
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’
-   81 |     SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str);
-      |     ^~~~~~~~~~~~~
-g++ -o scitbx/array_family/boost_python/flex_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&) [with ElementType = cctbx::crystal_orientation]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  175 |         resize(new_size, ElementType());
-      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o lib/rstbx_symmetry_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_symmetry_constraints_ext.so.0 rstbx/symmetry/constraints/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = std::__cxx11::basic_string<char>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
@@ -20772,12 +20989,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const cctbx::crystal_orientation&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = cctbx::crystal_orientation]’ declared here
-  165 |       void resize(size_type const& new_size, ElementType const& x) {
-      |            ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘<anonymous>’ declared here
-  175 |         resize(new_size, ElementType());
-      |                          ^~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = std::__cxx11::basic_string<char>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
@@ -20853,72 +21064,17 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/cassert:44,
-                 from /usr/include/boost/move/detail/type_traits.hpp:33,
-                 from /usr/include/boost/move/traits.hpp:31,
-                 from /usr/include/boost/move/utility.hpp:30,
-                 from /usr/include/boost/optional/optional.hpp:59,
-                 from /usr/include/boost/optional.hpp:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<std::complex<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<std::complex<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  769 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  770 |         shared_plain<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~                  
-  771 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  772 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
-  117 |     f_w::numeric_common("complex_double", local_scope)
-      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::complex<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::complex<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  773 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  774 |         shared<ElementType>,
-      |         ~~~~~~~~~~~~~~~~~~~~                        
-  775 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  776 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
-      |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
-  117 |     f_w::numeric_common("complex_double", local_scope)
-      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = std::__cxx11::basic_string<char>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = unsigned char]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = unsigned char]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -20977,25 +21133,31 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  888 |       return plain(python_name)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
-  132 |     fw::ordered("std_string", scope())
-      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+ 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
-g++ -o scitbx/array_family/boost_python/flex_tiny_size_t_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = std::complex<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
-  202 |       return copy_slice<e_t>(self, slices_simple);
-      |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
-  228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
-      |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = std::__cxx11::basic_string<char>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = std::__cxx11::basic_string<char>]’
+  119 |       detail::copy_to_slice_detail(self, slices, other);
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >]’
+  269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
+      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+  289 |         setitem_nd_slice(a, slices, b);
+      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -21045,24 +21207,34 @@
   805 |         .def("capacity", capacity)
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  807 |         .def("__getitem__", getitem_1d_slice)
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  808 |         .def("__getitem__", getitem_1d, GetitemReturnValuePolicy())
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  809 |         .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy())
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+  810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  910 |       return plain(python_name)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string<char>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::__cxx11::basic_string<char>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::__cxx11::basic_string<char> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  888 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
-  117 |     f_w::numeric_common("complex_double", local_scope)
-      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   89 |     for (int i=0;i<self.accessor().nd();i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = std::complex<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16:   required from here
+  132 |     fw::ordered("std_string", scope())
+      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   70 |           if (idx_a[j] < slices[j].stop) break;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = short unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = short unsigned int]’
+  119 |       detail::copy_to_slice_detail(self, slices, other);
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -21121,177 +21293,31 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
-  117 |     f_w::numeric_common("complex_double", local_scope)
-      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-  114 |     for (int i=0;i<self.accessor().nd();i++) {
-      |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<int, scitbx::af::flex_grid<> >; e_t = int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1048 |       return integer(python_name, flex_root_scope);
-      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3:   required from here
-  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<int>; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/bits/stl_function.h:1435,
-                 from /usr/include/c++/14/functional:49,
-                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
-                 from /usr/include/boost/function/detail/prologue.hpp:15,
-                 from /usr/include/boost/function/function_template.hpp:13,
-                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
-                 from /usr/include/boost/function/function0.hpp:11,
-                 from /usr/include/boost/python/errors.hpp:13,
-                 from /usr/include/boost/python/handle.hpp:11,
-                 from /usr/include/boost/python/to_python_value.hpp:14,
-                 from /usr/include/boost/python/default_call_policies.hpp:10,
-                 from /usr/include/boost/python/make_function.hpp:10,
-                 from /usr/include/boost/python/def.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<int, scitbx::af::flex_grid<> >; e_t = int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1048 |       return integer(python_name, flex_root_scope);
-      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3:   required from here
-  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<int>; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-g++ -o lib/rstbx_simage_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simage_ext.so.0 rstbx/simage/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:2:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/basic_statistics.h: In instantiation of ‘scitbx::math::median_statistics<FloatType> scitbx::math::median_functor::dispersion(const scitbx::af::ref<ElementType>&) [with FloatType = double]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:31:26:   required from ‘static scitbx::math::median_statistics<FloatType> scitbx::af::boost_python::median_functor_wrapper<FloatType>::dispersion(wt&, const scitbx::af::const_ref<ElementType>&) [with FloatType = double; wt = scitbx::math::median_functor]’
-   31 |       return O.dispersion(af::make_ref(buffer));
-      |              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:40:13:   required from ‘static void scitbx::af::boost_python::median_functor_wrapper<FloatType>::wrap(const char*) [with FloatType = double]’
-   36 |       class_<wt>(name, no_init)
-      |       ~~~~~~~~~~~~~~~~~~~~~~~~~
-   37 |         .def(init<>())
-      |         ~~~~~~~~~~~~~~
-   38 |         .def(init<wt::random_number_engine_t::result_type>(arg("seed")))
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-   39 |         .def("__call__", call, arg("data"))
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-   40 |         .def("dispersion", dispersion, arg("data"))
-      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:63:41:   required from here
-   63 |     median_functor_wrapper<double>::wrap("median_functor");
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/basic_statistics.h:210:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  210 |       for (int i=0; i < data.size(); ++i) {
-      |                     ~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long int, scitbx::af::flex_grid<> >; e_t = long int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1048 |       return integer(python_name, flex_root_scope);
-      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3:   required from here
-  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<long int>; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<long int, scitbx::af::flex_grid<> >; e_t = long int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
-      |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<long int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<long int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1048 |       return integer(python_name, flex_root_scope);
-      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3:   required from here
-  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<long int>; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<signed char, scitbx::af::flex_grid<> >; e_t = signed char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1048 |       return integer(python_name, flex_root_scope);
-      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3:   required from here
-  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<signed char>; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<signed char, scitbx::af::flex_grid<> >; e_t = signed char]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<signed char, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<signed char>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1048 |       return integer(python_name, flex_root_scope);
-      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3:   required from here
-  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<signed char>; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = std::complex<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = std::complex<double>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   70 |           if (idx_a[j] < slices[j].stop) break;
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = unsigned int]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = unsigned int]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -21350,58 +21376,25 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<std::complex<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<std::complex<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   910 |       return plain(python_name)
       |              ~~~~~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24:   required from here
-  117 |     f_w::numeric_common("complex_double", local_scope)
-      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   70 |           if (idx_a[j] < slices[j].stop) break;
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::first_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short int, scitbx::af::flex_grid<> >; e_t = short int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  963 |         def("first_index", first_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1031 |       return numeric_no_pow(python_name, flex_root_scope)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+  966 |       return numeric_common(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1048 |       return integer(python_name, flex_root_scope);
-      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3:   required from here
-  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<short int>; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  616 |       return first_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional<long unsigned int> scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::last_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<short int, scitbx::af::flex_grid<> >; e_t = short int]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
-  964 |         def("last_index", last_index_a_s);
-      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<unsigned int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<unsigned int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
  1031 |       return numeric_no_pow(python_name, flex_root_scope)
       |              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<short int, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<short int>, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
- 1048 |       return integer(python_name, flex_root_scope);
-      |              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3:   required from here
-  242 |     flex_wrapper<intType>::signed_integer(#pyname, scope()) \
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<short int>; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
-  621 |       return last_index(a, std::bind2nd(std::equal_to<e_t>(), x));
-      |                            ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/usr/include/c++/14/backward/binders.h:172:5: note: declared here
-  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
-      |     ^~~~~~~
-Create symlinks for: 'lib/rstbx_simage_ext.so.0.0.1'
-    'lib/rstbx_simage_ext.so.0'->'lib/rstbx_simage_ext.so.0.0.1'
-    'lib/rstbx_simage_ext.so'->'lib/rstbx_simage_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/loops.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/loops.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3:   required from here
+  105 |     flex_wrapper<uIntType>::integer(#pyname, scope()) \
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   70 |           if (idx_a[j] < slices[j].stop) break;
+Create symlinks for: 'lib/rstbx_symmetry_constraints_ext.so.0.0.1'
+    'lib/rstbx_symmetry_constraints_ext.so.0'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1'
+    'lib/rstbx_symmetry_constraints_ext.so'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1'
+g++ -o scitbx/array_family/boost_python/flex_vec2_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_bulk_solvent_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_bulk_solvent_ext.so.0 mmtbx/bulk_solvent/bulk_solvent_ext.o mmtbx/bulk_solvent/bulk_solvent.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -21537,10 +21530,28 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-Create symlinks for: 'lib/mmtbx_bulk_solvent_ext.so.0.0.1'
-    'lib/mmtbx_bulk_solvent_ext.so.0'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1'
-    'lib/mmtbx_bulk_solvent_ext.so'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1'
-g++ -o scitbx/array_family/boost_python/show_sizes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/show_sizes.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:2:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/basic_statistics.h: In instantiation of ‘scitbx::math::median_statistics<FloatType> scitbx::math::median_functor::dispersion(const scitbx::af::ref<ElementType>&) [with FloatType = double]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:31:26:   required from ‘static scitbx::math::median_statistics<FloatType> scitbx::af::boost_python::median_functor_wrapper<FloatType>::dispersion(wt&, const scitbx::af::const_ref<ElementType>&) [with FloatType = double; wt = scitbx::math::median_functor]’
+   31 |       return O.dispersion(af::make_ref(buffer));
+      |              ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:40:13:   required from ‘static void scitbx::af::boost_python::median_functor_wrapper<FloatType>::wrap(const char*) [with FloatType = double]’
+   36 |       class_<wt>(name, no_init)
+      |       ~~~~~~~~~~~~~~~~~~~~~~~~~
+   37 |         .def(init<>())
+      |         ~~~~~~~~~~~~~~
+   38 |         .def(init<wt::random_number_engine_t::result_type>(arg("seed")))
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+   39 |         .def("__call__", call, arg("data"))
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+   40 |         .def("dispersion", dispersion, arg("data"))
+      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:63:41:   required from here
+   63 |     median_functor_wrapper<double>::wrap("median_functor");
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/basic_statistics.h:210:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  210 |       for (int i=0; i < data.size(); ++i) {
+      |                     ~~^~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<signed char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<signed char>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
@@ -21603,7 +21614,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_geometry_indexing_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_indexing_ext.so.0 mmtbx/geometry/boost_python/indexing_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<short int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<short int>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
@@ -21987,7 +21998,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-g++ -o lib/dxtbx_masking_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_masking_ext.so.0 dxtbx/src/dxtbx/masking/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = signed char]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
@@ -22394,21 +22404,6 @@
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |         ^~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = long int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = long int]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
@@ -22495,6 +22490,10 @@
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
+Create symlinks for: 'lib/mmtbx_geometry_indexing_ext.so.0.0.1'
+    'lib/mmtbx_geometry_indexing_ext.so.0'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1'
+    'lib/mmtbx_geometry_indexing_ext.so'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1'
+g++ -o lib/mmtbx_geometry_clash_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_clash_ext.so.0 mmtbx/geometry/boost_python/clash_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = signed char]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = signed char]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
@@ -22581,6 +22580,8 @@
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
+g++ -o scitbx/array_family/boost_python/flex_vec3_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = short int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = short int]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
@@ -22667,6 +22668,31 @@
       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
+Create symlinks for: 'lib/mmtbx_geometry_clash_ext.so.0.0.1'
+    'lib/mmtbx_geometry_clash_ext.so.0'->'lib/mmtbx_geometry_clash_ext.so.0.0.1'
+    'lib/mmtbx_geometry_clash_ext.so'->'lib/mmtbx_geometry_clash_ext.so.0.0.1'
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |         ^~~~~~~~~~~~~
+g++ -o scitbx/array_family/boost_python/flex_sym_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/rstbx_simulation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simulation_ext.so.0 rstbx/simulation/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/rstbx_indexing_api_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_indexing_api_ext.so.0 rstbx/indexing_api/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+ar rc reduce/lib/libreduce2lib.a mmtbx/reduce/PositionReturn.o mmtbx/reduce/InteractionGraph.o mmtbx/reduce/Optimizers.o
+g++ -o scitbx/array_family/boost_python/flex_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -22853,8 +22879,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/array_family/boost_python/numpy_bridge.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DSCITBX_HAVE_NUMPY_INCLUDE -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::vec3<double>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::vec3<double>]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
@@ -22929,6 +22953,25 @@
       |     ~~~~~~~~~~^~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
+Create symlinks for: 'lib/rstbx_simulation_ext.so.0.0.1'
+    'lib/rstbx_simulation_ext.so.0'->'lib/rstbx_simulation_ext.so.0.0.1'
+    'lib/rstbx_simulation_ext.so'->'lib/rstbx_simulation_ext.so.0.0.1'
+Create symlinks for: 'lib/rstbx_indexing_api_ext.so.0.0.1'
+    'lib/rstbx_indexing_api_ext.so.0'->'lib/rstbx_indexing_api_ext.so.0.0.1'
+    'lib/rstbx_indexing_api_ext.so'->'lib/rstbx_indexing_api_ext.so.0.0.1'
+g++ -o lib/mmtbx_ramachandran_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ramachandran_restraints_ext.so.0 mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/mmtbx_bulk_solvent_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_bulk_solvent_ext.so.0 mmtbx/bulk_solvent/bulk_solvent_ext.o mmtbx/bulk_solvent/bulk_solvent.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/array_family/boost_python/flex_tiny_size_t_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp
+ranlib reduce/lib/libreduce2lib.a
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/boost_python/loops.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/loops.cpp
+g++ -o scitbx/array_family/boost_python/show_sizes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/show_sizes.cpp
+g++ -o lib/rstbx_simage_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simage_ext.so.0 rstbx/simage/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1'
+    'lib/mmtbx_ramachandran_restraints_ext.so.0'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1'
+    'lib/mmtbx_ramachandran_restraints_ext.so'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1'
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
@@ -22949,13 +22992,7 @@
   128 |     for(std::size_t i=0;i<ij[0];i++) { //slow
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:129:28: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
   129 |       for(std::size_t j=0;j<ij[1];j++) { //fast
-g++ -o scitbx/array_family/boost_python/shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_geometry_clash_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_clash_ext.so.0 mmtbx/geometry/boost_python/clash_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/dxtbx_masking_ext.so.0.0.1'
-    'lib/dxtbx_masking_ext.so.0'->'lib/dxtbx_masking_ext.so.0.0.1'
-    'lib/dxtbx_masking_ext.so'->'lib/dxtbx_masking_ext.so.0.0.1'
-g++ -o scitbx/cubicle_neighbors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicle_neighbors_ext.cpp
+g++ -o scitbx/array_family/boost_python/numpy_bridge.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DSCITBX_HAVE_NUMPY_INCLUDE -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
@@ -23006,9 +23043,10 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-Create symlinks for: 'lib/mmtbx_geometry_clash_ext.so.0.0.1'
-    'lib/mmtbx_geometry_clash_ext.so.0'->'lib/mmtbx_geometry_clash_ext.so.0.0.1'
-    'lib/mmtbx_geometry_clash_ext.so'->'lib/mmtbx_geometry_clash_ext.so.0.0.1'
+Create symlinks for: 'lib/mmtbx_bulk_solvent_ext.so.0.0.1'
+    'lib/mmtbx_bulk_solvent_ext.so.0'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1'
+    'lib/mmtbx_bulk_solvent_ext.so'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1'
+g++ -o scitbx/array_family/boost_python/shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = scitbx::vec2<double>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::vec2<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
@@ -23146,7 +23184,11 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/fftpack/boost_python/fftpack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp
+g++ -o scitbx/cubicle_neighbors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicle_neighbors_ext.cpp
+Create symlinks for: 'lib/rstbx_simage_ext.so.0.0.1'
+    'lib/rstbx_simage_ext.so.0'->'lib/rstbx_simage_ext.so.0.0.1'
+    'lib/rstbx_simage_ext.so'->'lib/rstbx_simage_ext.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::vec2<double>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::vec2<double>]’
@@ -23222,7 +23264,10 @@
       |     ~~~~~~~~~~^~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
+g++ -o scitbx/fftpack/boost_python/fftpack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/glmtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/glmtbx/boost_python/ext.cc
+g++ -o lib/mmtbx_probe_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_probe_ext.so.0 mmtbx/probe/boost_python/probe_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/probe/lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/graphics_utils/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/graphics_utils/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
@@ -23230,7 +23275,7 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:3:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:3:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
@@ -23245,7 +23290,7 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:3:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:3:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
@@ -23256,7 +23301,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
    43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
       |         ^~~~~~~~~~~~~
-g++ -o lib/rstbx_simulation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simulation_ext.so.0 rstbx/simulation/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/mmtbx_probe_ext.so.0.0.1'
+    'lib/mmtbx_probe_ext.so.0'->'lib/mmtbx_probe_ext.so.0.0.1'
+    'lib/mmtbx_probe_ext.so'->'lib/mmtbx_probe_ext.so.0.0.1'
+g++ -o scitbx/iso_surface/iso_surface_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/iso_surface/iso_surface_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/rstbx_diffraction_fastbragg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_diffraction_fastbragg_ext.so.0 rstbx/diffraction/fastbragg/fastbragg_ext.o rstbx/diffraction/fastbragg/fastbragg.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -23268,11 +23318,11 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<scitbx::vec3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<scitbx::vec3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<scitbx::sym_mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<scitbx::sym_mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   769 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   770 |         shared_plain<ElementType>,
@@ -23281,17 +23331,17 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   772 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
-  117 |     f_w::plain("vec3_int")
-      |     ~~~~~~~~~~^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
+  124 |     f_w::plain("sym_mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::vec3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::vec3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::sym_mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::sym_mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   773 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   774 |         shared<ElementType>,
@@ -23300,21 +23350,21 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   776 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
-  117 |     f_w::plain("vec3_int")
-      |     ~~~~~~~~~~^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
+  124 |     f_w::plain("sym_mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = scitbx::vec3<int>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = scitbx::sym_mat3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -23365,20 +23415,20 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
-  117 |     f_w::plain("vec3_int")
-      |     ~~~~~~~~~~^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
+  124 |     f_w::plain("sym_mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::vec3<int>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::sym_mat3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -23437,9 +23487,9 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
-  117 |     f_w::plain("vec3_int")
-      |     ~~~~~~~~~~^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
+  124 |     f_w::plain("sym_mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
@@ -23454,11 +23504,11 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<scitbx::sym_mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<scitbx::sym_mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<scitbx::vec3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<scitbx::vec3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   769 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   770 |         shared_plain<ElementType>,
@@ -23467,17 +23517,17 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   772 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
-  124 |     f_w::plain("sym_mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
+  117 |     f_w::plain("vec3_int")
+      |     ~~~~~~~~~~^~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::sym_mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::sym_mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::vec3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::vec3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   773 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   774 |         shared<ElementType>,
@@ -23486,23 +23536,23 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   776 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
-  124 |     f_w::plain("sym_mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
+  117 |     f_w::plain("vec3_int")
+      |     ~~~~~~~~~~^~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::vec3<int>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::vec3<int>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::sym_mat3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::sym_mat3<double>]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -23561,23 +23611,20 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
-  117 |     f_w::plain("vec3_int")
-      |     ~~~~~~~~~~^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
+  124 |     f_w::plain("sym_mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
-Create symlinks for: 'lib/rstbx_simulation_ext.so.0.0.1'
-    'lib/rstbx_simulation_ext.so.0'->'lib/rstbx_simulation_ext.so.0.0.1'
-    'lib/rstbx_simulation_ext.so'->'lib/rstbx_simulation_ext.so.0.0.1'
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = scitbx::sym_mat3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = scitbx::vec3<int>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -23628,20 +23675,20 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
-  124 |     f_w::plain("sym_mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
+  117 |     f_w::plain("vec3_int")
+      |     ~~~~~~~~~~^~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::sym_mat3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::vec3<int>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -23700,24 +23747,23 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
-  124 |     f_w::plain("sym_mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
+  117 |     f_w::plain("vec3_int")
+      |     ~~~~~~~~~~^~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/iso_surface/iso_surface_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/iso_surface/iso_surface_ext.cpp
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::sym_mat3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::sym_mat3<double>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::vec3<int>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::vec3<int>]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::sym_mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::sym_mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::sym_mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::vec3<int>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::vec3<int>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::vec3<int> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -23776,12 +23822,41 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15:   required from here
-  124 |     f_w::plain("sym_mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15:   required from here
+  117 |     f_w::plain("vec3_int")
+      |     ~~~~~~~~~~^~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
+Create symlinks for: 'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1'
+    'lib/rstbx_diffraction_fastbragg_ext.so.0'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1'
+    'lib/rstbx_diffraction_fastbragg_ext.so'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1'
+g++ -o scitbx/lbfgs/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DSCITBX_LBFGS_HAVE_LBFGS_FEM -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgs/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/rstbx_bandpass_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bandpass_ext.so.0 rstbx/bandpass/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lann-cctbx -lann_adaptor -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/mmtbx_scaling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_scaling_ext.so.0 mmtbx/scaling/scaling_ext.o mmtbx/scaling/twinning_bpl.o mmtbx/scaling/relative_scaling_bpl.o mmtbx/scaling/outlier_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/lbfgs/lbfgs_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable scitbx/lbfgs/lbfgs_fem.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
+   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
+      |         ^~~~~~~~~~~~~
+Create symlinks for: 'lib/rstbx_bandpass_ext.so.0.0.1'
+    'lib/rstbx_bandpass_ext.so.0'->'lib/rstbx_bandpass_ext.so.0.0.1'
+    'lib/rstbx_bandpass_ext.so'->'lib/rstbx_bandpass_ext.so.0.0.1'
+g++ -o scitbx/lbfgsb/boost_python/lbfgsb_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/linalg/boost_python/linalg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/linalg_ext.cpp
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -23792,15 +23867,12 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<scitbx::af::tiny<long unsigned int, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<scitbx::af::tiny<long unsigned int, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<scitbx::mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<scitbx::mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   769 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   770 |         shared_plain<ElementType>,
@@ -23809,17 +23881,17 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   772 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
-   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
+  180 |     f_w::plain("mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::af::tiny<long unsigned int, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::af::tiny<long unsigned int, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   773 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   774 |         shared<ElementType>,
@@ -23828,21 +23900,22 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   776 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
-   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
+  180 |     f_w::plain("mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = tiny<long unsigned int, 2>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = scitbx::mat3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -23893,20 +23966,20 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
-   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
+  180 |     f_w::plain("mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = tiny<long unsigned int, 2>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::mat3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -23965,23 +24038,23 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
-   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
+  180 |     f_w::plain("mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::af::tiny<long unsigned int, 2>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = tiny<long unsigned int, 2>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::mat3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::mat3<double>]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -24040,38 +24113,50 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
-   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
+  180 |     f_w::plain("mat3_double")
+      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/gridding.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp:4:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   64 |     for (i = 0; red_n > 1 && i < opt_factors.size(); i++) {
-      |                              ~~^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   67 |     for (i = 0; i < opt_factors.size(); i++) {
-      |                 ~~^~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |                       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’
-   43 |         SCITBX_ASSERT(str_end - str_begin <= str_capacity);
-      |         ^~~~~~~~~~~~~
-g++ -o scitbx/lbfgs/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DSCITBX_LBFGS_HAVE_LBFGS_FEM -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgs/ext.cpp
+Create symlinks for: 'lib/mmtbx_scaling_ext.so.0.0.1'
+    'lib/mmtbx_scaling_ext.so.0'->'lib/mmtbx_scaling_ext.so.0.0.1'
+    'lib/mmtbx_scaling_ext.so'->'lib/mmtbx_scaling_ext.so.0.0.1'
+g++ -o scitbx/linalg/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/matrix.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/io.hpp:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/close_chain.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem.hpp:10,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/lbfgs_fem.hpp:1,
+                 from scitbx/lbfgs/lbfgs_fem.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   63 |       if (i < sz) s[i++] = c;
+      |           ~~^~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   40 |       if (pos < 0 || pos >= command_line_args.buffer.size()) {
+      |                      ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:9:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
+  115 |           if (dexp <= ad_hoc_limits::max_digit_count) {
+      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  653 |         if (iw+1 != ed.size()) {
+      |             ~~~~~^~~~~~~~~~~~
+g++ -o scitbx/linalg/boost_python/cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/cholesky.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/variant.hpp:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:7:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   93 |                 if (c0e[0] == i0) {
+      |                     ~~~~~~~^~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/rstbx_diffraction_fastbragg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_diffraction_fastbragg_ext.so.0 rstbx/diffraction/fastbragg/fastbragg_ext.o rstbx/diffraction/fastbragg/fastbragg.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /usr/include/c++/14/cassert:44,
                  from /usr/include/boost/move/detail/type_traits.hpp:33,
                  from /usr/include/boost/move/traits.hpp:31,
@@ -24082,12 +24167,15 @@
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<scitbx::mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<scitbx::mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain<scitbx::af::tiny<long unsigned int, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared_plain<scitbx::af::tiny<long unsigned int, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   769 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   770 |         shared_plain<ElementType>,
@@ -24096,17 +24184,18 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   772 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
-  180 |     f_w::plain("mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
+   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::mat3<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+g++ -o lib/rstbx_integration_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_integration_ext.so.0 rstbx/apps/integration_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lann-cctbx -lann_adaptor -lspotfinder -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::af::tiny<long unsigned int, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::af::tiny<long unsigned int, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
       |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   773 |       scitbx::boost_python::container_conversions::from_python_sequence<
       |                                                    ^~~~~~~~~~~~~~~~~~~~~
   774 |         shared<ElementType>,
@@ -24115,54 +24204,31 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
   776 |           ::variable_capacity_policy>();
       |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
-  180 |     f_w::plain("mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
+   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o scitbx/lbfgs/lbfgs_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable scitbx/lbfgs/lbfgs_fem.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:8:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
+  704 |             while (pos < internal_file_len) {
+      |                    ~~~~^~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/linalg/boost_python/householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/householder.cpp
+g++ -o scitbx/linalg/boost_python/svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/svd.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /usr/include/c++/14/cassert:44,
-                 from /usr/include/boost/move/detail/type_traits.hpp:33,
-                 from /usr/include/boost/move/traits.hpp:31,
-                 from /usr/include/boost/move/utility.hpp:30,
-                 from /usr/include/boost/optional/optional.hpp:59,
-                 from /usr/include/boost/optional.hpp:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::vector<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::vector<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = std::vector<unsigned int>; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
-  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  131 |         w_t,
-      |         ~~~~                                        
-  132 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  133 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:40:53:   required from here
-   40 |     shared_wrapper<std::vector<unsigned>, rir>::wrap("stl_vector_unsigned");
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/linalg/boost_python/eigensystem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/eigensystem.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = scitbx::mat3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::copy_slice(const const_ref<ElementType, flex_grid<> >&, small<slice, 10>) [with T = tiny<long unsigned int, 2>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29:   required from ‘static scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_nd_slice(const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&, const scitbx::af::small<boost::python::slice, 10>&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   202 |       return copy_slice<e_t>(self, slices_simple);
       |              ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54:   required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   228 |         return boost::python::object(getitem_nd_slice(a.const_ref(), slices));
       |                                      ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -24213,20 +24279,20 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~
   806 |         .def("__getitem__", getitem_tuple) // must be before other __getitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
-  180 |     f_w::plain("mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
+   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    89 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::mat3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = tiny<long unsigned int, 2>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -24285,61 +24351,23 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
-  180 |     f_w::plain("mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
+   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   114 |     for (int i=0;i<self.accessor().nd();i++) {
       |                  ~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::vector<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::vector<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = std::vector<double>; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
-  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  131 |         w_t,
-      |         ~~~~                                        
-  132 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  133 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:41:51:   required from here
-   41 |     shared_wrapper<std::vector<double>, rir>::wrap("stl_vector_double");
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::set<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::set<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = std::set<unsigned int>; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
-  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-  131 |         w_t,
-      |         ~~~~                                        
-  132 |         scitbx::boost_python::container_conversions
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
-  133 |           ::variable_capacity_policy>();
-      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:42:50:   required from here
-   42 |     shared_wrapper<std::set<unsigned>, rir>::wrap("stl_set_unsigned")
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::mat3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = scitbx::mat3<double>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa<ElementType, scitbx::af::flex_grid<> >&, scitbx::af::small<scitbx::af::slice, 10>, const scitbx::af::const_ref<ElementType, scitbx::af::flex_grid<> >&) [with T = scitbx::af::tiny<long unsigned int, 2>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:119:35:   required from ‘void scitbx::af::copy_to_slice(versa<ElementType, flex_grid<> >&, small<slice, 10>, const const_ref<ElementType, flex_grid<> >&) [with T = tiny<long unsigned int, 2>]’
   119 |       detail::copy_to_slice_detail(self, slices, other);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_nd_slice(f_t&, const scitbx::af::small<boost::python::slice, 10>&, const f_t&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; f_t = scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >]’
   269 |       copy_to_slice<e_t>(self, slices_simple, other.const_ref());
       |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25:   required from ‘static void scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>]’
   289 |         setitem_nd_slice(a, slices, b);
       |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::mat3<double>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::mat3<double>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::mat3<double> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13:   required from ‘static scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::class_f_t scitbx::af::boost_python::flex_wrapper<ElementType, GetitemReturnValuePolicy>::plain(const std::string&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy<boost::python::copy_non_const_reference>; class_f_t = boost::python::class_<scitbx::af::versa<scitbx::af::tiny<long unsigned int, 2>, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper<scitbx::af::tiny<long unsigned int, 2> >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string<char>]’
   782 |       result
       |       ~~~~~~ 
   783 |         .def(init<flex_grid<> const&, optional<ElementType const&> >())
@@ -24398,12 +24426,95 @@
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   810 |         .def("__setitem__", setitem_tuple) // must be before other __setitem__
       |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15:   required from here
-  180 |     f_w::plain("mat3_double")
-      |     ~~~~~~~~~~^~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47:   required from here
+   32 |     flex_wrapper<tiny<std::size_t, 2> >::plain("tiny_size_t_2")
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |           if (idx_a[j] < slices[j].stop) break;
-g++ -o lib/rstbx_indexing_api_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_indexing_api_ext.so.0 rstbx/indexing_api/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/rstbx_integration_ext.so.0.0.1'
+    'lib/rstbx_integration_ext.so.0'->'lib/rstbx_integration_ext.so.0.0.1'
+    'lib/rstbx_integration_ext.so'->'lib/rstbx_integration_ext.so.0.0.1'
+g++ -o scitbx/linalg/boost_python/lapack_fem_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/gridding.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp:4:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   64 |     for (i = 0; red_n > 1 && i < opt_factors.size(); i++) {
+      |                              ~~^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+   67 |     for (i = 0; i < opt_factors.size(); i++) {
+      |                 ~~^~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/cassert:44,
+                 from /usr/include/boost/move/detail/type_traits.hpp:33,
+                 from /usr/include/boost/move/traits.hpp:31,
+                 from /usr/include/boost/move/utility.hpp:30,
+                 from /usr/include/boost/optional/optional.hpp:59,
+                 from /usr/include/boost/optional.hpp:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref_reductions.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:31,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::vector<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::vector<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = std::vector<unsigned int>; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  131 |         w_t,
+      |         ~~~~                                        
+  132 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  133 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:40:53:   required from here
+   40 |     shared_wrapper<std::vector<unsigned>, rir>::wrap("stl_vector_unsigned");
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::vector<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::vector<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = std::vector<double>; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  131 |         w_t,
+      |         ~~~~                                        
+  132 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  133 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:41:51:   required from here
+   41 |     shared_wrapper<std::vector<double>, rir>::wrap("stl_vector_double");
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<std::set<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<std::set<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52:   required from ‘static boost::python::class_<scitbx::af::shared<ElementType> > scitbx::af::boost_python::shared_wrapper<ElementType, GetitemReturnValuePolicy>::wrap(const std::string&) [with ElementType = std::set<unsigned int>; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string<char>]’
+  130 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+  131 |         w_t,
+      |         ~~~~                                        
+  132 |         scitbx::boost_python::container_conversions
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
+  133 |           ::variable_capacity_policy>();
+      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~             
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:42:50:   required from here
+   42 |     shared_wrapper<std::set<unsigned>, rir>::wrap("stl_set_unsigned")
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::shared<scitbx::mat3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::shared<scitbx::mat3<int> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
@@ -24480,15 +24591,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-Create symlinks for: 'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1'
-    'lib/rstbx_diffraction_fastbragg_ext.so.0'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1'
-    'lib/rstbx_diffraction_fastbragg_ext.so'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1'
-Create symlinks for: 'lib/rstbx_indexing_api_ext.so.0.0.1'
-    'lib/rstbx_indexing_api_ext.so.0'->'lib/rstbx_indexing_api_ext.so.0.0.1'
-    'lib/rstbx_indexing_api_ext.so'->'lib/rstbx_indexing_api_ext.so.0.0.1'
-g++ -o scitbx/lbfgsb/boost_python/lbfgsb_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/linalg/boost_python/linalg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/linalg_ext.cpp
+g++ -o scitbx/lstbx/boost_python/lstbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lstbx/boost_python/lstbx_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicle_neighbors_ext.cpp:3:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicle_neighbors.hpp: In instantiation of ‘std::map<int, std::vector<unsigned int> > scitbx::cubicle_neighbors<FloatType>::neighbors_of(const scitbx::af::const_ref<scitbx::vec3<NumType> >&, const FloatType&) [with FloatType = double]’:
@@ -24501,8 +24604,6 @@
    63 |           if (i_cub[1] < 0 || i_cub[1] >= n_cubicles[1]) continue;
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicle_neighbors.hpp:65:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
    65 |           if (i_cub[2] < 0 || i_cub[2] >= n_cubicles[2]) continue;
-g++ -o lib/rstbx_integration_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_integration_ext.so.0 rstbx/apps/integration_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lann-cctbx -lann_adaptor -lspotfinder -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/mmtbx_probe_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_probe_ext.so.0 mmtbx/probe/boost_python/probe_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/probe/lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicle_neighbors.hpp:4:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3<unsigned int> scitbx::cubicles<CubicleContentType, FloatType>::i_cubicle(const SiteType&) const [with SiteType = scitbx::vec3<double>; CubicleContentType = std::vector<scitbx::cubicle_neighbors<>::cubicle_site, std::allocator<scitbx::cubicle_neighbors<>::cubicle_site> >; FloatType = double]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicle_neighbors.hpp:43:30:   required from ‘scitbx::cubicle_neighbors<FloatType>::cubicle_neighbors(const scitbx::af::const_ref<scitbx::vec3<NumType> >&, const FloatType&, const FloatType&) [with FloatType = double]’
@@ -24589,57 +24690,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
   176 |         else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1;
       |                  ~~^~~~~~~~~~~~~~~~~~
-g++ -o scitbx/linalg/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/matrix.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/linalg/boost_python/cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/cholesky.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/io.hpp:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/close_chain.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem.hpp:10,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/lbfgs_fem.hpp:1,
-                 from scitbx/lbfgs/lbfgs_fem.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   63 |       if (i < sz) s[i++] = c;
-      |           ~~^~~~
-Create symlinks for: 'lib/rstbx_integration_ext.so.0.0.1'
-    'lib/rstbx_integration_ext.so.0'->'lib/rstbx_integration_ext.so.0.0.1'
-    'lib/rstbx_integration_ext.so'->'lib/rstbx_integration_ext.so.0.0.1'
-g++ -o scitbx/linalg/boost_python/householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/householder.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-   40 |       if (pos < 0 || pos >= command_line_args.buffer.size()) {
-      |                      ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:9:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
-  115 |           if (dexp <= ad_hoc_limits::max_digit_count) {
-      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  653 |         if (iw+1 != ed.size()) {
-      |             ~~~~~^~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/variant.hpp:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   93 |                 if (c0e[0] == i0) {
-      |                     ~~~~~~~^~~~~
-g++ -o scitbx/linalg/boost_python/svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/svd.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:8:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
-  704 |             while (pos < internal_file_len) {
-      |                    ~~~~^~~~~~~~~~~~~~~~~~~
-Create symlinks for: 'lib/mmtbx_probe_ext.so.0.0.1'
-    'lib/mmtbx_probe_ext.so.0'->'lib/mmtbx_probe_ext.so.0.0.1'
-    'lib/mmtbx_probe_ext.so'->'lib/mmtbx_probe_ext.so.0.0.1'
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref<ElementType, scitbx::af::flex_grid<> >&, bool, int) [with ElementType = bool]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3:   required from here
   191 |     return ref_flex_as_numpy_array(O, optional, type_num); \
@@ -24779,7 +24829,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’
   138 |     SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr));
       |     ^~~~~~~~~~~~~
-g++ -o scitbx/linalg/boost_python/eigensystem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/eigensystem.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref<ElementType, scitbx::af::flex_grid<> >&, bool, int) [with ElementType = std::complex<double>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3:   required from here
   191 |     return ref_flex_as_numpy_array(O, optional, type_num); \
@@ -24841,7 +24890,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
    86 |     for(unsigned i=0;i<nd;i++) {
       |                      ~^~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa<ElementType, scitbx::af::flex_grid<> > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short int]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3:   required from here
   199 |       versa_flex_from_numpy_array<ElementType >(arr_obj)); \
@@ -24970,112 +25018,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’
   138 |     SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr));
       |     ^~~~~~~~~~~~~
-g++ -o scitbx/linalg/boost_python/lapack_fem_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/rstbx_bandpass_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bandpass_ext.so.0 rstbx/bandpass/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lann-cctbx -lann_adaptor -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/rstbx_bandpass_ext.so.0.0.1'
-    'lib/rstbx_bandpass_ext.so.0'->'lib/rstbx_bandpass_ext.so.0.0.1'
-    'lib/rstbx_bandpass_ext.so'->'lib/rstbx_bandpass_ext.so.0.0.1'
-g++ -o scitbx/lstbx/boost_python/lstbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lstbx/boost_python/lstbx_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/lstbx/boost_python/normal_equations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lstbx/boost_python/normal_equations.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/math_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::vec3<int>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/memory:69,
-                 from /usr/include/boost/function/function_base.hpp:33,
-                 from /usr/include/boost/function/detail/prologue.hpp:18,
-                 from /usr/include/boost/function/function_template.hpp:13,
-                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
-                 from /usr/include/boost/function/function0.hpp:11,
-                 from /usr/include/boost/python/errors.hpp:13,
-                 from /usr/include/boost/python/handle.hpp:11,
-                 from /usr/include/boost/python/to_python_value.hpp:14,
-                 from /usr/include/boost/python/default_call_policies.hpp:10,
-                 from /usr/include/boost/python/make_function.hpp:10,
-                 from /usr/include/boost/python/def.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3<int>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3<int>*; _Size = long unsigned int; _Tp = scitbx::vec3<int>]’ declared here
-  312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
-      |     ^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
-  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
-      |                                                ^~~~~~~~~~~~~
-g++ -o scitbx/math/boost_python/basic_statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/basic_statistics.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::sym_mat3<double>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/memory:69,
-                 from /usr/include/boost/function/function_base.hpp:33,
-                 from /usr/include/boost/function/detail/prologue.hpp:18,
-                 from /usr/include/boost/function/function_template.hpp:13,
-                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
-                 from /usr/include/boost/function/function0.hpp:11,
-                 from /usr/include/boost/python/errors.hpp:13,
-                 from /usr/include/boost/python/handle.hpp:11,
-                 from /usr/include/boost/python/to_python_value.hpp:14,
-                 from /usr/include/boost/python/default_call_policies.hpp:10,
-                 from /usr/include/boost/python/make_function.hpp:10,
-                 from /usr/include/boost/python/def.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::sym_mat3<double>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::sym_mat3<double>*; _Size = long unsigned int; _Tp = scitbx::sym_mat3<double>]’ declared here
-  312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
-      |     ^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
-  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
-      |                                                ^~~~~~~~~~~~~
-g++ -o lib/mmtbx_scaling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_scaling_ext.so.0 mmtbx/scaling/scaling_ext.o mmtbx/scaling/twinning_bpl.o mmtbx/scaling/relative_scaling_bpl.o mmtbx/scaling/outlier_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::vec3<int>; AccessorType = scitbx::af::flex_grid<>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
-      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3<int>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3<int>]’ declared here
-  165 |       void resize(size_type const& new_size, ElementType const& x) {
-      |            ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
-  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
-      |                                                  ^~~~~~~~~~~~~
-g++ -o scitbx/math/boost_python/gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/gaussian.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/c++/14/memory:69,
-                 from /usr/include/boost/function/function_base.hpp:33,
-                 from /usr/include/boost/function/detail/prologue.hpp:18,
-                 from /usr/include/boost/function/function_template.hpp:13,
-                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
-                 from /usr/include/boost/function/function0.hpp:11,
-                 from /usr/include/boost/python/errors.hpp:13,
-                 from /usr/include/boost/python/handle.hpp:11,
-                 from /usr/include/boost/python/to_python_value.hpp:14,
-                 from /usr/include/boost/python/default_call_policies.hpp:10,
-                 from /usr/include/boost/python/make_function.hpp:10,
-                 from /usr/include/boost/python/def.hpp:11,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::af::tiny<long unsigned int, 2>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny<long unsigned int, 2>*; _Size = long unsigned int; _Tp = scitbx::af::tiny<long unsigned int, 2>]’ declared here
-  312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
-      |     ^~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
-  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
-      |                                                ^~~~~~~~~~~~~
+g++ -o lib/mmtbx_tls_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_ext.so.0 mmtbx/tls/tls_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/serialization/base_256.h:2,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/floating_point_epsilon.h:4,
@@ -25338,9 +25283,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   188 |           for(int j=0;j<label.size();j++) {
       |                       ~^~~~~~~~~~~~~
-Create symlinks for: 'lib/mmtbx_scaling_ext.so.0.0.1'
-    'lib/mmtbx_scaling_ext.so.0'->'lib/mmtbx_scaling_ext.so.0.0.1'
-    'lib/mmtbx_scaling_ext.so'->'lib/mmtbx_scaling_ext.so.0.0.1'
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb.h: In instantiation of ‘scitbx::lbfgsb::minimizer<FloatType>::minimizer(const int&, const int&, scitbx::af::shared<FloatType>, scitbx::af::shared<FloatType>, scitbx::af::shared<int>, bool, const FloatType&, const FloatType&, const int&) [with FloatType = double]’:
 /usr/include/boost/python/object/value_holder.hpp:131:11:   required from ‘boost::python::objects::value_holder<Value>::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8) [with A0 = boost::python::objects::reference_to_value<const int&>; A1 = boost::python::objects::reference_to_value<const int&>; A2 = boost::python::objects::reference_to_value<scitbx::af::shared<double> >; A3 = boost::python::objects::reference_to_value<scitbx::af::shared<double> >; A4 = boost::python::objects::reference_to_value<scitbx::af::shared<int> >; A5 = bool; A6 = boost::python::objects::reference_to_value<const double&>; A7 = boost::python::objects::reference_to_value<const double&>; A8 = boost::python::objects::reference_to_value<const int&>; Value = scitbx::lbfgsb::minimizer<double>; PyObject = _object]’
   131 |       PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a))
@@ -25451,26 +25393,67 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb.h:120:9: note: in expansion of macro ‘SCITBX_ASSERT’
   120 |         SCITBX_ASSERT(nbd.size() == n);
       |         ^~~~~~~~~~~~~
-g++ -o scitbx/math/boost_python/golay.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/golay.cpp
+Create symlinks for: 'lib/mmtbx_tls_ext.so.0.0.1'
+    'lib/mmtbx_tls_ext.so.0'->'lib/mmtbx_tls_ext.so.0.0.1'
+    'lib/mmtbx_tls_ext.so'->'lib/mmtbx_tls_ext.so.0.0.1'
+g++ -o scitbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/math_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_cubicle_neighbors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_cubicle_neighbors_ext.so.0 scitbx/cubicle_neighbors_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/scitbx_cubicle_neighbors_ext.so.0.0.1'
-    'lib/scitbx_cubicle_neighbors_ext.so.0'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1'
-    'lib/scitbx_cubicle_neighbors_ext.so'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1'
-g++ -o scitbx/math/boost_python/minimum_covering_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/minimum_covering_sphere.cpp
+g++ -o scitbx/math/boost_python/basic_statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/basic_statistics.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_tls_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_ext.so.0 mmtbx/tls/tls_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::sym_mat3<double>; AccessorType = scitbx::af::flex_grid<>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
-      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::sym_mat3<double>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::sym_mat3<double>]’ declared here
-  165 |       void resize(size_type const& new_size, ElementType const& x) {
-      |            ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
-  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
-      |                                                  ^~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::sym_mat3<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/memory:69,
+                 from /usr/include/boost/function/function_base.hpp:33,
+                 from /usr/include/boost/function/detail/prologue.hpp:18,
+                 from /usr/include/boost/function/function_template.hpp:13,
+                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
+                 from /usr/include/boost/function/function0.hpp:11,
+                 from /usr/include/boost/python/errors.hpp:13,
+                 from /usr/include/boost/python/handle.hpp:11,
+                 from /usr/include/boost/python/to_python_value.hpp:14,
+                 from /usr/include/boost/python/default_call_policies.hpp:10,
+                 from /usr/include/boost/python/make_function.hpp:10,
+                 from /usr/include/boost/python/def.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
+/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::sym_mat3<double>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::sym_mat3<double>*; _Size = long unsigned int; _Tp = scitbx::sym_mat3<double>]’ declared here
+  312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
+      |     ^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
+  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
+      |                                                ^~~~~~~~~~~~~
+g++ -o scitbx/math/boost_python/gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/gaussian.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::vec3<int>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/memory:69,
+                 from /usr/include/boost/function/function_base.hpp:33,
+                 from /usr/include/boost/function/detail/prologue.hpp:18,
+                 from /usr/include/boost/function/function_template.hpp:13,
+                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
+                 from /usr/include/boost/function/function0.hpp:11,
+                 from /usr/include/boost/python/errors.hpp:13,
+                 from /usr/include/boost/python/handle.hpp:11,
+                 from /usr/include/boost/python/to_python_value.hpp:14,
+                 from /usr/include/boost/python/default_call_policies.hpp:10,
+                 from /usr/include/boost/python/make_function.hpp:10,
+                 from /usr/include/boost/python/def.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
+/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3<int>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3<int>*; _Size = long unsigned int; _Tp = scitbx::vec3<int>]’ declared here
+  312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
+      |     ^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
+  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
+      |                                                ^~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sym_mat3.h:4,
@@ -25485,17 +25468,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:5: note: in expansion of macro ‘SCITBX_ASSERT’
   246 |     SCITBX_ASSERT(w.size() == n);
       |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; AccessorType = scitbx::af::flex_grid<>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
-      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny<long unsigned int, 2>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>]’ declared here
-  165 |       void resize(size_type const& new_size, ElementType const& x) {
-      |            ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
-  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
-      |                                                  ^~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
@@ -25522,13 +25494,32 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
   132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
       |                                                ^~~~~~~~~~~~~
-Create symlinks for: 'lib/mmtbx_tls_ext.so.0.0.1'
-    'lib/mmtbx_tls_ext.so.0'->'lib/mmtbx_tls_ext.so.0.0.1'
-    'lib/mmtbx_tls_ext.so'->'lib/mmtbx_tls_ext.so.0.0.1'
-g++ -o scitbx/math/boost_python/principal_axes_of_inertia.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/principal_axes_of_inertia.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/math/boost_python/row_echelon.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/row_echelon.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::vec2<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /usr/include/c++/14/memory:69,
+                 from /usr/include/boost/function/function_base.hpp:33,
+                 from /usr/include/boost/function/detail/prologue.hpp:18,
+                 from /usr/include/boost/function/function_template.hpp:13,
+                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
+                 from /usr/include/boost/function/function0.hpp:11,
+                 from /usr/include/boost/python/errors.hpp:13,
+                 from /usr/include/boost/python/handle.hpp:11,
+                 from /usr/include/boost/python/to_python_value.hpp:14,
+                 from /usr/include/boost/python/default_call_policies.hpp:10,
+                 from /usr/include/boost/python/make_function.hpp:10,
+                 from /usr/include/boost/python/def.hpp:11,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
+/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec2<double>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec2<double>*; _Size = long unsigned int; _Tp = scitbx::vec2<double>]’ declared here
+  312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
+      |     ^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
+  132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
+      |                                                ^~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
@@ -25555,12 +25546,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
   132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
       |                                                ^~~~~~~~~~~~~
-g++ -o scitbx/math/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/tensor_rank_2.cpp
+g++ -o scitbx/math/boost_python/golay.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/golay.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::vec2<double>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
   132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
@@ -25577,20 +25568,54 @@
                  from /usr/include/boost/python/make_function.hpp:10,
                  from /usr/include/boost/python/def.hpp:11,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6:
-/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec2<double>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec2<double>*; _Size = long unsigned int; _Tp = scitbx::vec2<double>]’ declared here
+/usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::af::tiny<long unsigned int, 2>&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny<long unsigned int, 2>*; _Size = long unsigned int; _Tp = scitbx::af::tiny<long unsigned int, 2>]’ declared here
   312 |     uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x)
       |     ^~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
   132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
       |                                                ^~~~~~~~~~~~~
+g++ -o scitbx/math/boost_python/minimum_covering_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/minimum_covering_sphere.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::sym_mat3<double>; AccessorType = scitbx::af::flex_grid<>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
+      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::sym_mat3<double>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::sym_mat3<double>]’ declared here
+  165 |       void resize(size_type const& new_size, ElementType const& x) {
+      |            ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
+  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
+      |                                                  ^~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/math/boost_python/principal_axes_of_inertia.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/principal_axes_of_inertia.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::vec3<int>; AccessorType = scitbx::af::flex_grid<>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
+      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3<int>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3<int>]’ declared here
+  165 |       void resize(size_type const& new_size, ElementType const& x) {
+      |            ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
+  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
+      |                                                  ^~~~~~~~~~~~~
+g++ -o lib/scitbx_cubicle_neighbors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_cubicle_neighbors_ext.so.0 scitbx/cubicle_neighbors_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/scitbx_iso_surface_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_iso_surface_ext.so.0 scitbx/iso_surface/iso_surface_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/math/boost_python/chebyshev.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/chebyshev.cpp
+g++ -o scitbx/math/boost_python/row_echelon.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/row_echelon.cpp
+Create symlinks for: 'lib/scitbx_cubicle_neighbors_ext.so.0.0.1'
+    'lib/scitbx_cubicle_neighbors_ext.so.0'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1'
+    'lib/scitbx_cubicle_neighbors_ext.so'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/math/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/tensor_rank_2.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/scitbx_iso_surface_ext.so.0.0.1'
     'lib/scitbx_iso_surface_ext.so.0'->'lib/scitbx_iso_surface_ext.so.0.0.1'
     'lib/scitbx_iso_surface_ext.so'->'lib/scitbx_iso_surface_ext.so.0.0.1'
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/math/boost_python/chebyshev.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/chebyshev.cpp
 g++ -o scitbx/math/boost_python/icosahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/icosahedron.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::vec2<double>; AccessorType = scitbx::af::flex_grid<>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
   168 |         base_class::resize(m_accessor.size_1d(), ElementType());
@@ -25602,8 +25627,17 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
   168 |         base_class::resize(m_accessor.size_1d(), ElementType());
       |                                                  ^~~~~~~~~~~~~
-g++ -o scitbx/math/boost_python/slatec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/slatec.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>; AccessorType = scitbx::af::flex_grid<>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
+      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny<long unsigned int, 2>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny<long unsigned int, 2>]’ declared here
+  165 |       void resize(size_type const& new_size, ElementType const& x) {
+      |            ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
+  168 |         base_class::resize(m_accessor.size_1d(), ElementType());
+      |                                                  ^~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::mat3<double>; AccessorType = scitbx::af::flex_grid<>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
   168 |         base_class::resize(m_accessor.size_1d(), ElementType());
@@ -25615,17 +25649,14 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
   168 |         base_class::resize(m_accessor.size_1d(), ElementType());
       |                                                  ^~~~~~~~~~~~~
-g++ -o scitbx/math/boost_python/line_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/line_search.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/math/boost_python/r3_rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/r3_rotation.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/math/boost_python/resample.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/resample.cpp
+g++ -o lib/rstbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_ext.so.0 rstbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/rstbx_ext.so.0.0.1'
+    'lib/rstbx_ext.so.0'->'lib/rstbx_ext.so.0.0.1'
+    'lib/rstbx_ext.so'->'lib/rstbx_ext.so.0.0.1'
+g++ -o lib/mmtbx_geometry_asa_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_asa_ext.so.0 mmtbx/geometry/boost_python/asa_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/math/boost_python/slatec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/slatec.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_graphics_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_graphics_utils_ext.so.0 scitbx/graphics_utils/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/scitbx_graphics_utils_ext.so.0.0.1'
-    'lib/scitbx_graphics_utils_ext.so.0'->'lib/scitbx_graphics_utils_ext.so.0.0.1'
-    'lib/scitbx_graphics_utils_ext.so'->'lib/scitbx_graphics_utils_ext.so.0.0.1'
-g++ -o scitbx/math/boost_python/quadrature.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/quadrature.cpp
+g++ -o scitbx/math/boost_python/line_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/line_search.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain<ElementType, AccessorType>::resize(const AccessorType&) [with ElementType = scitbx::vec3<double>; AccessorType = scitbx::af::flex_grid<>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
@@ -25638,66 +25669,79 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘<anonymous>’ declared here
   168 |         base_class::resize(m_accessor.size_1d(), ElementType());
       |                                                  ^~~~~~~~~~~~~
-g++ -o lib/rstbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_ext.so.0 rstbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/mmtbx_geometry_asa_ext.so.0.0.1'
+    'lib/mmtbx_geometry_asa_ext.so.0'->'lib/mmtbx_geometry_asa_ext.so.0.0.1'
+    'lib/mmtbx_geometry_asa_ext.so'->'lib/mmtbx_geometry_asa_ext.so.0.0.1'
+g++ -o scitbx/math/boost_python/r3_rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/r3_rotation.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/mmtbx_tls_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_utils_ext.so.0 mmtbx/tls/utils.o mmtbx/tls/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/scitbx_graphics_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_graphics_utils_ext.so.0 scitbx/graphics_utils/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/math/boost_python/resample.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/resample.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/scitbx_graphics_utils_ext.so.0.0.1'
+    'lib/scitbx_graphics_utils_ext.so.0'->'lib/scitbx_graphics_utils_ext.so.0.0.1'
+    'lib/scitbx_graphics_utils_ext.so'->'lib/scitbx_graphics_utils_ext.so.0.0.1'
+g++ -o scitbx/math/boost_python/quadrature.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/quadrature.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/scitbx_glmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_glmtbx_ext.so.0 scitbx/glmtbx/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/rstbx_ext.so.0.0.1'
-    'lib/rstbx_ext.so.0'->'lib/rstbx_ext.so.0.0.1'
-    'lib/rstbx_ext.so'->'lib/rstbx_ext.so.0.0.1'
+Create symlinks for: 'lib/mmtbx_tls_utils_ext.so.0.0.1'
+    'lib/mmtbx_tls_utils_ext.so.0'->'lib/mmtbx_tls_utils_ext.so.0.0.1'
+    'lib/mmtbx_tls_utils_ext.so'->'lib/mmtbx_tls_utils_ext.so.0.0.1'
+g++ -o scitbx/math/boost_python/unimodular_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/unimodular_generator.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/scitbx_glmtbx_ext.so.0.0.1'
     'lib/scitbx_glmtbx_ext.so.0'->'lib/scitbx_glmtbx_ext.so.0.0.1'
     'lib/scitbx_glmtbx_ext.so'->'lib/scitbx_glmtbx_ext.so.0.0.1'
-g++ -o scitbx/math/boost_python/unimodular_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/unimodular_generator.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/math/boost_python/halton.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/halton.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/math/boost_python/least_squares_plane.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/least_squares_plane.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/math/boost_python/continued_fraction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/continued_fraction.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/scitbx_lbfgsb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgsb_ext.so.0 scitbx/lbfgsb/boost_python/lbfgsb_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
+g++ -o lib/mmtbx_reduce_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reduce_ext.so.0 mmtbx/reduce/boost_python/reduce_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Lreduce/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/reduce/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/probe/lib -lreduce2lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/scitbx_lbfgsb_ext.so.0.0.1'
+    'lib/scitbx_lbfgsb_ext.so.0'->'lib/scitbx_lbfgsb_ext.so.0.0.1'
+    'lib/scitbx_lbfgsb_ext.so'->'lib/scitbx_lbfgsb_ext.so.0.0.1'
+g++ -o lib/scitbx_linalg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_linalg_ext.so.0 scitbx/linalg/boost_python/linalg_ext.o scitbx/linalg/boost_python/matrix.o scitbx/linalg/boost_python/cholesky.o scitbx/linalg/boost_python/householder.o scitbx/linalg/boost_python/svd.o scitbx/linalg/boost_python/eigensystem.o scitbx/linalg/boost_python/lapack_fem_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/math/boost_python/continued_fraction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/continued_fraction.cpp
 g++ -o scitbx/math/boost_python/numeric_limits.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/numeric_limits.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/scitbx_linalg_ext.so.0.0.1'
+    'lib/scitbx_linalg_ext.so.0'->'lib/scitbx_linalg_ext.so.0.0.1'
+    'lib/scitbx_linalg_ext.so'->'lib/scitbx_linalg_ext.so.0.0.1'
 g++ -o scitbx/math/boost_python/distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/distributions.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/math/boost_python/exp_functions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/exp_functions.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/math/boost_python/zernike.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/zernike.cpp
+Create symlinks for: 'lib/mmtbx_reduce_ext.so.0.0.1'
+    'lib/mmtbx_reduce_ext.so.0'->'lib/mmtbx_reduce_ext.so.0.0.1'
+    'lib/mmtbx_reduce_ext.so'->'lib/mmtbx_reduce_ext.so.0.0.1'
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_lbfgsb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgsb_ext.so.0 scitbx/lbfgsb/boost_python/lbfgsb_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
-Create symlinks for: 'lib/scitbx_lbfgsb_ext.so.0.0.1'
-    'lib/scitbx_lbfgsb_ext.so.0'->'lib/scitbx_lbfgsb_ext.so.0.0.1'
-    'lib/scitbx_lbfgsb_ext.so'->'lib/scitbx_lbfgsb_ext.so.0.0.1'
-g++ -o lib/mmtbx_tls_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_utils_ext.so.0 mmtbx/tls/utils.o mmtbx/tls/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o scitbx/math/boost_python/zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/zernike_moments.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/math/boost_python/2d_zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/2d_zernike_moments.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/mmtbx_tls_utils_ext.so.0.0.1'
-    'lib/mmtbx_tls_utils_ext.so.0'->'lib/mmtbx_tls_utils_ext.so.0.0.1'
-    'lib/mmtbx_tls_utils_ext.so'->'lib/mmtbx_tls_utils_ext.so.0.0.1'
 g++ -o scitbx/math/boost_python/weighted_covariance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/weighted_covariance.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/math/boost_python/rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/rotation.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_geometry_asa_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_asa_ext.so.0 mmtbx/geometry/boost_python/asa_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o scitbx/math/boost_python/interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/interpolation.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_linalg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_linalg_ext.so.0 scitbx/linalg/boost_python/linalg_ext.o scitbx/linalg/boost_python/matrix.o scitbx/linalg/boost_python/cholesky.o scitbx/linalg/boost_python/householder.o scitbx/linalg/boost_python/svd.o scitbx/linalg/boost_python/eigensystem.o scitbx/linalg/boost_python/lapack_fem_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o scitbx/math/boost_python/tetrahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/tetrahedron.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/math/boost_python/angle_derivative.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/boost_python/angle_derivative.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/mmtbx_geometry_asa_ext.so.0.0.1'
-    'lib/mmtbx_geometry_asa_ext.so.0'->'lib/mmtbx_geometry_asa_ext.so.0.0.1'
-    'lib/mmtbx_geometry_asa_ext.so'->'lib/mmtbx_geometry_asa_ext.so.0.0.1'
-Create symlinks for: 'lib/scitbx_linalg_ext.so.0.0.1'
-    'lib/scitbx_linalg_ext.so.0'->'lib/scitbx_linalg_ext.so.0.0.1'
-    'lib/scitbx_linalg_ext.so'->'lib/scitbx_linalg_ext.so.0.0.1'
+g++ -o lib/scitbx_fftpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_fftpack_ext.so.0 scitbx/fftpack/boost_python/fftpack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o scitbx/minpack/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/minpack/ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/r3_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/r3_utils_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/random/boost_python/random_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/random/boost_python/random_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/scitbx_fftpack_ext.so.0.0.1'
+    'lib/scitbx_fftpack_ext.so.0'->'lib/scitbx_fftpack_ext.so.0.0.1'
+    'lib/scitbx_fftpack_ext.so'->'lib/scitbx_fftpack_ext.so.0.0.1'
 g++ -o scitbx/random/boost_python/basic_distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/random/boost_python/basic_distributions.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/rigid_body/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/rigid_body/ext.cpp
@@ -25706,39 +25750,20 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/sparse/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/boost_python/matrix.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_fftpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_fftpack_ext.so.0 scitbx/fftpack/boost_python/fftpack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o scitbx/sparse/boost_python/approx_equal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/boost_python/approx_equal.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/scitbx_fftpack_ext.so.0.0.1'
-    'lib/scitbx_fftpack_ext.so.0'->'lib/scitbx_fftpack_ext.so.0.0.1'
-    'lib/scitbx_fftpack_ext.so'->'lib/scitbx_fftpack_ext.so.0.0.1'
 g++ -o scitbx/sparse/boost_python/random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/boost_python/random.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/sparse/boost_python/lu_factorization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/boost_python/lu_factorization.cpp
-g++ -o scitbx/sparse/boost_python/sparse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/boost_python/sparse_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/sparse/boost_python/sparse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/boost_python/sparse_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_lbfgs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgs_ext.so.0 scitbx/lbfgs/ext.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o scitbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/map_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/scitbx_lbfgs_ext.so.0.0.1'
-    'lib/scitbx_lbfgs_ext.so.0'->'lib/scitbx_lbfgs_ext.so.0.0.1'
-    'lib/scitbx_lbfgs_ext.so'->'lib/scitbx_lbfgs_ext.so.0.0.1'
 g++ -o scitbx/stl/set_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/stl/vector_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/vector_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/mmtbx_reduce_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reduce_ext.so.0 mmtbx/reduce/boost_python/reduce_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Lreduce/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/reduce/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/probe/lib -lreduce2lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/suffixtree/boost_python/suffixtree_shared_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/mmtbx_reduce_ext.so.0.0.1'
-    'lib/mmtbx_reduce_ext.so.0'->'lib/mmtbx_reduce_ext.so.0.0.1'
-    'lib/mmtbx_reduce_ext.so'->'lib/mmtbx_reduce_ext.so.0.0.1'
-g++ -o scitbx/suffixtree/boost_python/suffixtree_single_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/suffixtree/boost_python/suffixtree_single_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/suffixtree/boost_python/object_extensions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/suffixtree/boost_python/object_extensions.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/wigner/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/wigner/ext.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/minpack/raw.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/minpack/levenberg_marquardt.h:4,
@@ -25753,74 +25778,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/minpack/levenberg_marquardt.h:80:9: note: in expansion of macro ‘SCITBX_ASSERT’
    80 |         SCITBX_ASSERT(fvec.size() == m);
       |         ^~~~~~~~~~~~~
+g++ -o lib/rstbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_array_family_flex_ext.so.0 rstbx/array_family/ext.o rstbx/array_family/flex_rstbx_arrays.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/suffixtree/boost_python/suffixtree_shared_ext.cpp
+g++ -o scitbx/suffixtree/boost_python/suffixtree_single_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/suffixtree/boost_python/suffixtree_single_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o smtbx/ab_initio/ab_initio_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/ab_initio/ab_initio_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o smtbx/array_family/af_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/array_family/af_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o smtbx/refinement/constraints/boost_python/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/affine.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o smtbx/refinement/constraints/boost_python/constraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/constraints_ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o smtbx/refinement/constraints/boost_python/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/direction.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_ext.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h: In static member function ‘static void scitbx::stl::boost_python::set_wrapper<ElementType>::wrap(const std::string&)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h:52:28: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
-   52 |       bp::class_<w_t, std::auto_ptr<w_t> >(python_name.c_str())
-      |                            ^~~~~~~~
-In file included from /usr/include/c++/14/memory:78,
-                 from /usr/include/boost/config/no_tr1/memory.hpp:21,
-                 from /usr/include/boost/get_pointer.hpp:14,
-                 from /usr/include/boost/python/object/pointer_holder.hpp:11,
-                 from /usr/include/boost/python/to_python_indirect.hpp:10,
-                 from /usr/include/boost/python/converter/arg_to_python.hpp:10,
-                 from /usr/include/boost/python/call.hpp:15,
-                 from /usr/include/boost/python/object_core.hpp:14,
-                 from /usr/include/boost/python/object/class.hpp:9,
-                 from /usr/include/boost/python/class.hpp:13,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h:4:
-/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
-   59 |   template<typename> class auto_ptr;
-      |                            ^~~~~~~~
-In file included from /usr/include/boost/assert.hpp:58,
-                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:25,
-                 from /usr/include/boost/shared_ptr.hpp:17,
-                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
-                 from /usr/include/boost/python/converter/arg_to_python.hpp:15:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::set<unsigned int, std::less<unsigned int>, std::allocator<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::set<unsigned int, std::less<unsigned int>, std::allocator<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h:68:52:   required from ‘static void scitbx::stl::boost_python::set_wrapper<ElementType>::wrap(const std::string&) [with ElementType = unsigned int; std::string = std::__cxx11::basic_string<char>]’
-   68 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-   69 |         w_t, scitbx::boost_python::container_conversions::set_policy>();
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_ext.cpp:9:32:   required from here
-    9 |     set_wrapper<unsigned>::wrap("unsigned");
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::set<std::__cxx11::basic_string<char>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::__cxx11::basic_string<char> > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::set<std::__cxx11::basic_string<char>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::__cxx11::basic_string<char> > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h:68:52:   required from ‘static void scitbx::stl::boost_python::set_wrapper<ElementType>::wrap(const std::string&) [with ElementType = std::__cxx11::basic_string<char>; std::string = std::__cxx11::basic_string<char>]’
-   68 |       scitbx::boost_python::container_conversions::from_python_sequence<
-      |                                                    ^~~~~~~~~~~~~~~~~~~~~
-   69 |         w_t, scitbx::boost_python::container_conversions::set_policy>();
-      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_ext.cpp:10:35:   required from here
-   10 |     set_wrapper<std::string>::wrap("stl_string");
-      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-g++ -o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/geometrical_hydrogens.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/independent_scalar_parameters.cpp
+g++ -o scitbx/suffixtree/boost_python/object_extensions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/suffixtree/boost_python/object_extensions.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:6,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -25844,6 +25807,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’
    30 |       SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/wigner/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/wigner/ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_matrix.h:6,
@@ -25864,8 +25829,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    59 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
-g++ -o smtbx/refinement/constraints/boost_python/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/occupancy.cpp
+g++ -o smtbx/ab_initio/ab_initio_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/ab_initio/ab_initio_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/scitbx_lbfgs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgs_ext.so.0 scitbx/lbfgs/ext.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/rstbx_array_family_flex_ext.so.0.0.1'
+    'lib/rstbx_array_family_flex_ext.so.0'->'lib/rstbx_array_family_flex_ext.so.0.0.1'
+    'lib/rstbx_array_family_flex_ext.so'->'lib/rstbx_array_family_flex_ext.so.0.0.1'
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:5:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/rigid_body/tardy.h: In instantiation of ‘scitbx::af::shared<boost::shared_ptr<scitbx::rigid_body::body_t<FloatType> > > scitbx::rigid_body::tardy::construct_bodies(const scitbx::af::const_ref<scitbx::vec3<NumType> >&, const scitbx::af::const_ref<ElementType>&, const boost::python::api::object&, const FloatType&) [with FloatType = double]’:
@@ -25986,7 +25955,9 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/rigid_body/tardy.h:163:9: note: in expansion of macro ‘SCITBX_ASSERT’
   163 |         SCITBX_ASSERT(body->parent < nc);
       |         ^~~~~~~~~~~~~
-g++ -o smtbx/refinement/constraints/boost_python/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/reparametrisation.cpp
+g++ -o smtbx/array_family/af_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/array_family/af_ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o smtbx/refinement/constraints/boost_python/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/affine.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny<ElementType, N>::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 1]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/rigid_body/joint_lib.h:648:13:   required from ‘boost::shared_ptr<scitbx::rigid_body::joint_t<FloatType> > scitbx::rigid_body::joint_lib::revolute<FloatType>::new_q(const scitbx::af::const_ref<ElementType>&) const [with FloatType = double]’
@@ -26001,7 +25972,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’
    30 |       SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o smtbx/refinement/constraints/boost_python/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/rigid.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny<ElementType, N>::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 12]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/rigid_body/joint_lib.h:45:16:   required from ‘scitbx::af::tiny<FloatType, 12> scitbx::rigid_body::joint_lib::rbda_eq_4_13(const scitbx::af::tiny<FloatType, 4>&) [with FloatType = double]’
    45 |     return af::tiny<ft, 4*3>(coeffs, coeffs+4*3) * ft(0.5);
@@ -26047,15 +26017,71 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    59 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
+Create symlinks for: 'lib/scitbx_lbfgs_ext.so.0.0.1'
+    'lib/scitbx_lbfgs_ext.so.0'->'lib/scitbx_lbfgs_ext.so.0.0.1'
+    'lib/scitbx_lbfgs_ext.so'->'lib/scitbx_lbfgs_ext.so.0.0.1'
+g++ -o smtbx/refinement/constraints/boost_python/constraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/constraints_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/rstbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_array_family_flex_ext.so.0 rstbx/array_family/ext.o rstbx/array_family/flex_rstbx_arrays.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o smtbx/refinement/constraints/boost_python/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/same_group.cpp
+g++ -o smtbx/refinement/constraints/boost_python/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/direction.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_ext.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h: In static member function ‘static void scitbx::stl::boost_python::set_wrapper<ElementType>::wrap(const std::string&)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h:52:28: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
+   52 |       bp::class_<w_t, std::auto_ptr<w_t> >(python_name.c_str())
+      |                            ^~~~~~~~
+In file included from /usr/include/c++/14/memory:78,
+                 from /usr/include/boost/config/no_tr1/memory.hpp:21,
+                 from /usr/include/boost/get_pointer.hpp:14,
+                 from /usr/include/boost/python/object/pointer_holder.hpp:11,
+                 from /usr/include/boost/python/to_python_indirect.hpp:10,
+                 from /usr/include/boost/python/converter/arg_to_python.hpp:10,
+                 from /usr/include/boost/python/call.hpp:15,
+                 from /usr/include/boost/python/object_core.hpp:14,
+                 from /usr/include/boost/python/object/class.hpp:9,
+                 from /usr/include/boost/python/class.hpp:13,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h:4:
+/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
+   59 |   template<typename> class auto_ptr;
+      |                            ^~~~~~~~
+In file included from /usr/include/boost/assert.hpp:58,
+                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:25,
+                 from /usr/include/boost/shared_ptr.hpp:17,
+                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
+                 from /usr/include/boost/python/converter/arg_to_python.hpp:15:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::set<unsigned int, std::less<unsigned int>, std::allocator<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::set<unsigned int, std::less<unsigned int>, std::allocator<unsigned int> >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h:68:52:   required from ‘static void scitbx::stl::boost_python::set_wrapper<ElementType>::wrap(const std::string&) [with ElementType = unsigned int; std::string = std::__cxx11::basic_string<char>]’
+   68 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+   69 |         w_t, scitbx::boost_python::container_conversions::set_policy>();
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_ext.cpp:9:32:   required from here
+    9 |     set_wrapper<unsigned>::wrap("unsigned");
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::set<std::__cxx11::basic_string<char>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::__cxx11::basic_string<char> > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::set<std::__cxx11::basic_string<char>, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::__cxx11::basic_string<char> > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_wrapper.h:68:52:   required from ‘static void scitbx::stl::boost_python::set_wrapper<ElementType>::wrap(const std::string&) [with ElementType = std::__cxx11::basic_string<char>; std::string = std::__cxx11::basic_string<char>]’
+   68 |       scitbx::boost_python::container_conversions::from_python_sequence<
+      |                                                    ^~~~~~~~~~~~~~~~~~~~~
+   69 |         w_t, scitbx::boost_python::container_conversions::set_policy>();
+      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/stl/set_ext.cpp:10:35:   required from here
+   10 |     set_wrapper<std::string>::wrap("stl_string");
+      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o smtbx/refinement/constraints/boost_python/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/scaled_adp.cpp
+g++ -o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/geometrical_hydrogens.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/independent_scalar_parameters.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/rstbx_array_family_flex_ext.so.0.0.1'
-    'lib/rstbx_array_family_flex_ext.so.0'->'lib/rstbx_array_family_flex_ext.so.0.0.1'
-    'lib/rstbx_array_family_flex_ext.so'->'lib/rstbx_array_family_flex_ext.so.0.0.1'
 In file included from /usr/include/boost/assert.hpp:58,
                  from /usr/include/boost/smart_ptr/shared_ptr.hpp:25,
                  from /usr/include/boost/shared_ptr.hpp:17,
@@ -26086,8 +26112,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o smtbx/refinement/constraints/boost_python/scatterer_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/scatterer_parameters.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o smtbx/refinement/constraints/boost_python/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/occupancy.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::vector<double, std::allocator<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::vector<double, std::allocator<double> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
@@ -26107,6 +26132,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::vector<std::set<unsigned int>, std::allocator<std::set<unsigned int> > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::vector<std::set<unsigned int>, std::allocator<std::set<unsigned int> > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
   146 |         &convertible,
@@ -26126,67 +26152,81 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   197 |         if (!is_range) assert(i == obj_size);
       |                               ~~^~~~~~~~~~~
-g++ -o lib/scitbx_suffixtree_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_shared_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/scitbx_suffixtree_shared_ext.so.0.0.1'
-    'lib/scitbx_suffixtree_shared_ext.so.0'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1'
-    'lib/scitbx_suffixtree_shared_ext.so'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1'
-g++ -o lib/smtbx_array_family_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_array_family_ext.so.0 smtbx/array_family/af_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o smtbx/refinement/constraints/boost_python/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/reparametrisation.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o smtbx/refinement/constraints/boost_python/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/rigid.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o smtbx/refinement/constraints/boost_python/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/same_group.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/scitbx_lstbx_normal_equations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lstbx_normal_equations_ext.so.0 scitbx/lstbx/boost_python/lstbx_ext.o scitbx/lstbx/boost_python/normal_equations.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o smtbx/refinement/constraints/boost_python/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/scaled_adp.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1'
+    'lib/scitbx_lstbx_normal_equations_ext.so.0'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1'
+    'lib/scitbx_lstbx_normal_equations_ext.so'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1'
+g++ -o smtbx/refinement/constraints/boost_python/scatterer_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/scatterer_parameters.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/refinement/constraints/boost_python/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/shared.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/smtbx_array_family_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_array_family_ext.so.0 smtbx/array_family/af_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/smtbx_array_family_ext.so.0.0.1'
     'lib/smtbx_array_family_ext.so.0'->'lib/smtbx_array_family_ext.so.0.0.1'
     'lib/smtbx_array_family_ext.so'->'lib/smtbx_array_family_ext.so.0.0.1'
-g++ -o lib/smtbx_ab_initio_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_ab_initio_ext.so.0 smtbx/ab_initio/ab_initio_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o smtbx/refinement/constraints/boost_python/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/special_position.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/smtbx_ab_initio_ext.so.0.0.1'
-    'lib/smtbx_ab_initio_ext.so.0'->'lib/smtbx_ab_initio_ext.so.0.0.1'
-    'lib/smtbx_ab_initio_ext.so'->'lib/smtbx_ab_initio_ext.so.0.0.1'
-g++ -o lib/scitbx_lstbx_normal_equations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lstbx_normal_equations_ext.so.0 scitbx/lstbx/boost_python/lstbx_ext.o scitbx/lstbx/boost_python/normal_equations.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/symmetry_equivalent.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/scitbx_r3_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_r3_utils_ext.so.0 scitbx/r3_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1'
-    'lib/scitbx_lstbx_normal_equations_ext.so.0'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1'
-    'lib/scitbx_lstbx_normal_equations_ext.so'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1'
+g++ -o lib/scitbx_suffixtree_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_shared_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o lib/dxtbx_imageset_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_imageset_ext.so.0 dxtbx/src/dxtbx/boost_python/imageset_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5 -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5
+g++ -o lib/smtbx_ab_initio_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_ab_initio_ext.so.0 smtbx/ab_initio/ab_initio_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/scitbx_r3_utils_ext.so.0.0.1'
+    'lib/scitbx_r3_utils_ext.so.0'->'lib/scitbx_r3_utils_ext.so.0.0.1'
+    'lib/scitbx_r3_utils_ext.so'->'lib/scitbx_r3_utils_ext.so.0.0.1'
 g++ -o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.cpp
+Create symlinks for: 'lib/scitbx_suffixtree_shared_ext.so.0.0.1'
+    'lib/scitbx_suffixtree_shared_ext.so.0'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1'
+    'lib/scitbx_suffixtree_shared_ext.so'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1'
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/scitbx_r3_utils_ext.so.0.0.1'
-    'lib/scitbx_r3_utils_ext.so.0'->'lib/scitbx_r3_utils_ext.so.0.0.1'
-    'lib/scitbx_r3_utils_ext.so'->'lib/scitbx_r3_utils_ext.so.0.0.1'
+Create symlinks for: 'lib/smtbx_ab_initio_ext.so.0.0.1'
+    'lib/smtbx_ab_initio_ext.so.0'->'lib/smtbx_ab_initio_ext.so.0.0.1'
+    'lib/smtbx_ab_initio_ext.so'->'lib/smtbx_ab_initio_ext.so.0.0.1'
 g++ -o smtbx/refinement/boost_python/least_squares_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/boost_python/least_squares_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/refinement/boost_python/weighting_schemes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/boost_python/weighting_schemes.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/scitbx_minpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_minpack_ext.so.0 scitbx/minpack/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_minpack -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o smtbx/refinement/boost_python/least_squares.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/boost_python/least_squares.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o smtbx/refinement/restraints/boost_python/origin_fixing.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/restraints/boost_python/origin_fixing.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_minpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_minpack_ext.so.0 scitbx/minpack/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_minpack -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o smtbx/refinement/restraints/boost_python/restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/restraints/boost_python/restraints_ext.cpp
 Create symlinks for: 'lib/scitbx_minpack_ext.so.0.0.1'
     'lib/scitbx_minpack_ext.so.0'->'lib/scitbx_minpack_ext.so.0.0.1'
     'lib/scitbx_minpack_ext.so'->'lib/scitbx_minpack_ext.so.0.0.1'
+g++ -o smtbx/refinement/restraints/boost_python/origin_fixing.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/restraints/boost_python/origin_fixing.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/dxtbx_imageset_ext.so.0.0.1'
+    'lib/dxtbx_imageset_ext.so.0'->'lib/dxtbx_imageset_ext.so.0.0.1'
+    'lib/dxtbx_imageset_ext.so'->'lib/dxtbx_imageset_ext.so.0.0.1'
+g++ -o smtbx/refinement/restraints/boost_python/restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/restraints/boost_python/restraints_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/stl/map_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o lib/scitbx_wigner_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_wigner_ext.so.0 scitbx/wigner/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o smtbx/structure_factors/direct/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/structure_factors/direct/boost_python/ext.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 Create symlinks for: 'lib/scitbx_wigner_ext.so.0.0.1'
     'lib/scitbx_wigner_ext.so.0'->'lib/scitbx_wigner_ext.so.0.0.1'
     'lib/scitbx_wigner_ext.so'->'lib/scitbx_wigner_ext.so.0.0.1'
-g++ -o smtbx/structure_factors/direct/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/structure_factors/direct/boost_python/ext.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/structure_factors/direct/boost_python/standard_xray.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/structure_factors/direct/boost_python/standard_xray.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o spotfinder/array_family/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/array_family/flex_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o spotfinder/array_family/flex_distl_spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/array_family/flex_distl_spot.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/scitbx_stl_set_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_set_ext.so.0 scitbx/stl/set_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o spotfinder/core_toolbox/boost_python/distltbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/distltbx_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_stl_set_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_set_ext.so.0 scitbx/stl/set_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/scitbx_stl_set_ext.so.0.0.1'
     'lib/scitbx_stl_set_ext.so.0'->'lib/scitbx_stl_set_ext.so.0.0.1'
     'lib/scitbx_stl_set_ext.so'->'lib/scitbx_stl_set_ext.so.0.0.1'
@@ -26194,7 +26234,6 @@
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o spotfinder/dxtbx_toolbox/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/dxtbx_toolbox/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/dxtbx_toolbox/src -Ispotfinder/dxtbx_toolbox/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/dxtbx_toolbox/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/dxtbx_toolbox/ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o spotfinder/core_toolbox/boost_python/hough_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/hough_ext.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_matrix.h:4:
@@ -26219,10 +26258,10 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘<anonymous>’ declared here
   132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
       |                                                ^~~~~~~~~~~~~
+g++ -o spotfinder/core_toolbox/boost_python/hough_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/spotfinder/core_toolbox/boost_python/hough_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/scitbx_array_family_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_shared_ext.so.0 scitbx/array_family/boost_python/shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313
 g++ -o lib/std_pair_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=std_pair_ext.so.0 boost_adaptbx/std_pair_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer
-g++ -o mmtbx/masks/tst_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/masks/tst_mask.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny<double, 6>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
   132 |         std::uninitialized_fill_n(begin(), sz, ElementType());
@@ -26236,27 +26275,62 @@
 Create symlinks for: 'lib/std_pair_ext.so.0.0.1'
     'lib/std_pair_ext.so.0'->'lib/std_pair_ext.so.0.0.1'
     'lib/std_pair_ext.so'->'lib/std_pair_ext.so.0.0.1'
+g++ -o mmtbx/masks/tst_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/mmtbx/masks/tst_mask.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/scitbx_array_family_shared_ext.so.0.0.1'
+    'lib/scitbx_array_family_shared_ext.so.0'->'lib/scitbx_array_family_shared_ext.so.0.0.1'
+    'lib/scitbx_array_family_shared_ext.so'->'lib/scitbx_array_family_shared_ext.so.0.0.1'
 g++ -o scitbx/array_family/boost_python/regression_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/array_family/tst_accessors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/array_family/tst_af_1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/array_family/tst_af_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_2.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/array_family/tst_af_3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_3.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o lib/scitbx_array_family_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_shared_ext.so.0 scitbx/array_family/boost_python/shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313
 g++ -o scitbx/array_family/tst_af_4.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_4.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/tst_af_5.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_5.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/tiny_plain_apply.h:15,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_2.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -26361,73 +26435,14 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:15:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::c_grid<1>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:127:11:   required from here
-  127 |     verify(__LINE__, a.as_flex_grid().all(), a);
-      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
-   17 |         if (v[i] != a[i]) {
-      |             ~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::c_grid<4>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:145:11:   required from here
-  145 |     verify(__LINE__, a.as_flex_grid().all(), a);
-      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
-   17 |         if (v[i] != a[i]) {
-      |             ~~~~~^~~~~
-g++ -o scitbx/array_family/tst_af_5.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_5.cpp
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::c_grid<2>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:172:11:   required from here
-  172 |     verify(__LINE__, a.as_flex_grid().all(), a);
-      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
-   17 |         if (v[i] != a[i]) {
-      |             ~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::c_grid<3>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:202:11:   required from here
-  202 |     verify(__LINE__, a.as_flex_grid().all(), a);
-      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
-   17 |         if (v[i] != a[i]) {
-      |             ~~~~~^~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::tiny<long unsigned int, 1>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:248:11:   required from here
-  248 |     verify(__LINE__, a.as_flex_grid().all(), a.all());
-      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
-   17 |         if (v[i] != a[i]) {
-      |             ~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::tiny<long unsigned int, 4>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:280:11:   required from here
-  280 |     verify(__LINE__, a.as_flex_grid().all(), a.all());
-      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
-   17 |         if (v[i] != a[i]) {
-      |             ~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::tiny<long unsigned int, 2>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:326:11:   required from here
-  326 |     verify(__LINE__, a.as_flex_grid().all(), a.all());
-      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
-   17 |         if (v[i] != a[i]) {
-      |             ~~~~~^~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::tiny<long unsigned int, 3>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:371:11:   required from here
-  371 |     verify(__LINE__, a.as_flex_grid().all(), a.all());
-      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
-   17 |         if (v[i] != a[i]) {
-      |             ~~~~~^~~~~
-g++ -o lib/dxtbx_imageset_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_imageset_ext.so.0 dxtbx/src/dxtbx/boost_python/imageset_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5 -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/flex_grid.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_2.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/flex_types.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -26480,6 +26495,35 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/simple_io.h:5,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_3.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -26532,68 +26576,40 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/simple_io.h:5,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_3.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/tiny_plain_apply.h:15,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
+In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
+                 from /usr/include/boost/smart_ptr/scoped_array.hpp:13,
+                 from /usr/include/boost/scoped_array.hpp:13,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:10:
+/usr/include/boost/bind.hpp: At global scope:
+/usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
+   36 | BOOST_PRAGMA_MESSAGE(
+      | ^~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-Create symlinks for: 'lib/scitbx_array_family_shared_ext.so.0.0.1'
-    'lib/scitbx_array_family_shared_ext.so.0'->'lib/scitbx_array_family_shared_ext.so.0.0.1'
-    'lib/scitbx_array_family_shared_ext.so'->'lib/scitbx_array_family_shared_ext.so.0.0.1'
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -26620,6 +26636,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/array_family/tst_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_mat3.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -26672,32 +26689,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -26750,7 +26741,18 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/array_family/tst_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_mat3.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&) [with ElementType = scitbx::af::tiny<double, 6>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
+  175 |         resize(new_size, ElementType());
+      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny<double, 6>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny<double, 6>]’ declared here
+  165 |       void resize(size_type const& new_size, ElementType const& x) {
+      |            ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘<anonymous>’ declared here
+  175 |         resize(new_size, ElementType());
+      |                          ^~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/simple_io.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_4.cpp:1:
@@ -26780,52 +26782,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
-                 from /usr/include/boost/smart_ptr/scoped_array.hpp:13,
-                 from /usr/include/boost/scoped_array.hpp:13,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:10:
-/usr/include/boost/bind.hpp: At global scope:
-/usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’
-   36 | BOOST_PRAGMA_MESSAGE(
-      | ^~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:307:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&) [with ElementType = scitbx::af::tiny<double, 6>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
-  175 |         resize(new_size, ElementType());
-      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny<double, 6>&’ to ‘void scitbx::af::shared_plain<ElementType>::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny<double, 6>]’ declared here
-  165 |       void resize(size_type const& new_size, ElementType const& x) {
-      |            ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘<anonymous>’ declared here
-  175 |         resize(new_size, ElementType());
-      |                          ^~~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise<ArrayType>::run_2() [with ArrayType = scitbx::af::small_plain<int, 128>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12:   required from ‘static void {anonymous}::array_exercise<ArrayType>::run() [with ArrayType = scitbx::af::small_plain<int, 128>]’
    29 |       run_2();
@@ -26836,6 +26792,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain<int, 128>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |         for(int i=0;i<a2.size();i++) {
       |                     ~^~~~~~~~~~
+g++ -o scitbx/array_family/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_optional_copy.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise<ArrayType>::run_2() [with ArrayType = scitbx::af::small<int, 128>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12:   required from ‘static void {anonymous}::array_exercise<ArrayType>::run() [with ArrayType = scitbx::af::small<int, 128>]’
    29 |       run_2();
@@ -26846,32 +26803,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain<int, 128>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |         for(int i=0;i<a2.size();i++) {
       |                     ~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise<ArrayType>::run_2() [with ArrayType = scitbx::af::shared_plain<int>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12:   required from ‘static void {anonymous}::array_exercise<ArrayType>::run() [with ArrayType = scitbx::af::shared_plain<int>]’
    29 |       run_2();
@@ -26892,32 +26823,7 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    70 |         for(int i=0;i<a2.size();i++) {
       |                     ~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::versa_exercise<ArrayType, AltArrayType>::run_1() [with ArrayType = scitbx::af::versa_plain<int>; AltArrayType = scitbx::af::versa_plain<int, scitbx::af::c_grid<2> >]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_1.cpp:415:12:   required from ‘static void {anonymous}::versa_exercise<ArrayType, AltArrayType>::run() [with ArrayType = scitbx::af::versa_plain<int>; AltArrayType = scitbx::af::versa_plain<int, scitbx::af::c_grid<2> >]’
   415 |       run_1();
@@ -26981,10 +26887,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
    59 |         if (N < last - first) throw_range_error();
       |             ~~^~~~~~~~~~~~~~
-g++ -o scitbx/array_family/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_optional_copy.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/array_family/tst_rectangular_full_packed.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/simple_io.h:5,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_5.cpp:1:
@@ -27014,6 +26916,54 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:15:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::c_grid<1>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:127:11:   required from here
+  127 |     verify(__LINE__, a.as_flex_grid().all(), a);
+      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
+   17 |         if (v[i] != a[i]) {
+      |             ~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::c_grid<4>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:145:11:   required from here
+  145 |     verify(__LINE__, a.as_flex_grid().all(), a);
+      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
+   17 |         if (v[i] != a[i]) {
+      |             ~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::c_grid<2>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:172:11:   required from here
+  172 |     verify(__LINE__, a.as_flex_grid().all(), a);
+      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
+   17 |         if (v[i] != a[i]) {
+      |             ~~~~~^~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27040,103 +26990,132 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/array_family/tst_ref_matrix_facet.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_ref_matrix_facet.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/dxtbx_imageset_ext.so.0.0.1'
-    'lib/dxtbx_imageset_ext.so.0'->'lib/dxtbx_imageset_ext.so.0.0.1'
-    'lib/dxtbx_imageset_ext.so'->'lib/dxtbx_imageset_ext.so.0.0.1'
-g++ -o scitbx/array_family/tst_sym_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_sym_mat3.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_mat3.cpp:2:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::c_grid<3>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:202:11:   required from here
+  202 |     verify(__LINE__, a.as_flex_grid().all(), a);
+      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
+   17 |         if (v[i] != a[i]) {
+      |             ~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::tiny<long unsigned int, 1>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:248:11:   required from here
+  248 |     verify(__LINE__, a.as_flex_grid().all(), a.all());
+      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
+   17 |         if (v[i] != a[i]) {
+      |             ~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/array_family/tst_unsigned_float_arithmetic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/rectangular_full_packed.h:3,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::tiny<long unsigned int, 4>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:280:11:   required from here
+  280 |     verify(__LINE__, a.as_flex_grid().all(), a.all());
+      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
+   17 |         if (v[i] != a[i]) {
+      |             ~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::tiny<long unsigned int, 2>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:326:11:   required from here
+  326 |     verify(__LINE__, a.as_flex_grid().all(), a.all());
+      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
+   17 |         if (v[i] != a[i]) {
+      |             ~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small<long int, 10>; VectorType2 = scitbx::af::tiny<long unsigned int, 3>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_accessors.cpp:371:11:   required from here
+  371 |     verify(__LINE__, a.as_flex_grid().all(), a.all());
+      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare]
+   17 |         if (v[i] != a[i]) {
+      |             ~~~~~^~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
+g++ -o scitbx/array_family/tst_rectangular_full_packed.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/tst_ref_matrix_facet.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_ref_matrix_facet.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o lib/scitbx_random_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_random_ext.so.0 scitbx/random/boost_python/random_ext.o scitbx/random/boost_python/basic_distributions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/array_family/tst_sym_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_sym_mat3.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/vec3.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/mat3.h:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_mat3.cpp:2:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -27222,65 +27201,75 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp: In function ‘int main()’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:52:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   52 |       for(int i=0; i<rfp.n_rows(); i++) {
-      |                    ~^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:53:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   53 |         for(int j=0; j<rfp.n_columns(); j++) printf("%02d ", int(u_f(i,j)));
-      |                      ~^~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type)’:
+Create symlinks for: 'lib/scitbx_random_ext.so.0.0.1'
+    'lib/scitbx_random_ext.so.0'->'lib/scitbx_random_ext.so.0.0.1'
+    'lib/scitbx_random_ext.so'->'lib/scitbx_random_ext.so.0.0.1'
+g++ -o scitbx/array_family/tst_unsigned_float_arithmetic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp
+g++ -o scitbx/array_family/tst_vec3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_vec3.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/tst_af_2 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o scitbx/error/tst_error.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/error -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error/tst_error.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/fftpack/timing/fftpack_timer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/timing/fftpack_timer.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/accessors/rectangular_full_packed.h:3,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o lib/scitbx_stl_vector_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_vector_ext.so.0 scitbx/stl/vector_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27335,32 +27324,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
-   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
-      |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
-      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27413,67 +27376,39 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /usr/include/boost/assert.hpp:58,
-                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:25,
-                 from /usr/include/boost/shared_ptr.hpp:17,
-                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
-                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
-                 from /usr/include/boost/python/call.hpp:15,
-                 from /usr/include/boost/python/object_core.hpp:14,
-                 from /usr/include/boost/python/object.hpp:9,
-                 from /usr/include/boost/python/list.hpp:10,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:7:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::vector<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::vector<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:156:78:   required from here
-  156 |       scitbx::boost_python::container_conversions::variable_capacity_policy>();
-      |                                                                              ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::__cxx11::list<double>; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::__cxx11::list<double>; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:160:72:   required from here
-  160 |       scitbx::boost_python::container_conversions::linked_list_policy>();
-      |                                                                        ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = boost::array<double, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = boost::array<double, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:164:71:   required from here
-  164 |       scitbx::boost_python::container_conversions::fixed_size_policy>();
-      |                                                                       ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = boost::array<double, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = boost::array<double, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:168:71:   required from here
-  168 |       scitbx::boost_python::container_conversions::fixed_size_policy>();
-      |                                                                       ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::small<double, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::small<double, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’
-  146 |         &convertible,
-      |         ^~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:172:75:   required from here
-  172 |       scitbx::boost_python::container_conversions::fixed_capacity_policy>();
-      |                                                                           ^
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
-  197 |         if (!is_range) assert(i == obj_size);
-      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp: In function ‘int main()’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:52:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   52 |       for(int i=0; i<rfp.n_rows(); i++) {
+      |                    ~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:53:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   53 |         for(int j=0; j<rfp.n_columns(); j++) printf("%02d ", int(u_f(i,j)));
+      |                      ~^~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -27507,46 +27442,59 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/array_family/tst_af_2 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/tiny_algebra.h:14,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp:3:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/array_family/tst_vec3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_vec3.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/error/tst_error.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/error -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error/tst_error.cpp
-g++ -o scitbx/array_family/tst_unsigned_float_arithmetic -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_unsigned_float_arithmetic.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/array_family/tst_rectangular_full_packed -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_rectangular_full_packed.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-g++ -o lib/scitbx_random_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_random_ext.so.0 scitbx/random/boost_python/random_ext.o scitbx/random/boost_python/basic_distributions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o lib/smtbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_stl_map_ext.so.0 smtbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain<ElementType, AccessorType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  161 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain,
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/array_family/tst_af_3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
@@ -27578,28 +27526,19 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/array_family/tst_af_3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-g++ -o scitbx/fftpack/timing/fftpack_timer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/timing/fftpack_timer.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+Create symlinks for: 'lib/scitbx_stl_vector_ext.so.0.0.1'
+    'lib/scitbx_stl_vector_ext.so.0'->'lib/scitbx_stl_vector_ext.so.0.0.1'
+    'lib/scitbx_stl_vector_ext.so'->'lib/scitbx_stl_vector_ext.so.0.0.1'
 g++ -o scitbx/fftpack/timing/test0.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/timing/test0.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/array_family/tst_ref_matrix_facet -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_ref_matrix_facet.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-Create symlinks for: 'lib/smtbx_stl_map_ext.so.0.0.1'
-    'lib/smtbx_stl_map_ext.so.0'->'lib/smtbx_stl_map_ext.so.0.0.1'
-    'lib/smtbx_stl_map_ext.so'->'lib/smtbx_stl_map_ext.so.0.0.1'
+g++ -o scitbx/array_family/tst_af_5 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_5.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
 g++ -o scitbx/lbfgs/sdrive_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable scitbx/lbfgs/sdrive_fem.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/lbfgs/tst_lbfgs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgs/tst_lbfgs.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/lbfgsb/dev/driver1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver1.cpp
-g++ -o scitbx/lbfgsb/dev/driver2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver2.cpp
+g++ -o scitbx/error/tst_error -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/error/tst_error.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_types.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/complex_to_complex.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/timing/fftpack_timer.cpp:6:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/tiny_algebra.h:14,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp:3:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27627,18 +27566,77 @@
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-Create symlinks for: 'lib/scitbx_random_ext.so.0.0.1'
-    'lib/scitbx_random_ext.so.0'->'lib/scitbx_random_ext.so.0.0.1'
-    'lib/scitbx_random_ext.so'->'lib/scitbx_random_ext.so.0.0.1'
+g++ -o scitbx/array_family/tst_rectangular_full_packed -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_rectangular_full_packed.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o scitbx/lbfgs/tst_lbfgs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgs/tst_lbfgs.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /usr/include/boost/assert.hpp:58,
+                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:25,
+                 from /usr/include/boost/shared_ptr.hpp:17,
+                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
+                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
+                 from /usr/include/boost/python/call.hpp:15,
+                 from /usr/include/boost/python/object_core.hpp:14,
+                 from /usr/include/boost/python/object.hpp:9,
+                 from /usr/include/boost/python/list.hpp:10,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:7:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::vector<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::vector<double>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:156:78:   required from here
+  156 |       scitbx::boost_python::container_conversions::variable_capacity_policy>();
+      |                                                                              ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = std::__cxx11::list<double>; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = std::__cxx11::list<double>; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:160:72:   required from here
+  160 |       scitbx::boost_python::container_conversions::linked_list_policy>();
+      |                                                                        ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = boost::array<double, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = boost::array<double, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:164:71:   required from here
+  164 |       scitbx::boost_python::container_conversions::fixed_size_policy>();
+      |                                                                       ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = boost::array<double, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = boost::array<double, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:168:71:   required from here
+  168 |       scitbx::boost_python::container_conversions::fixed_size_policy>();
+      |                                                                       ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::convertible(PyObject*) [with ContainerType = scitbx::af::small<double, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:146:9:   required from ‘scitbx::boost_python::container_conversions::from_python_sequence<ContainerType, ConversionPolicy>::from_python_sequence() [with ContainerType = scitbx::af::small<double, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’
+  146 |         &convertible,
+      |         ^~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:172:75:   required from here
+  172 |       scitbx::boost_python::container_conversions::fixed_capacity_policy>();
+      |                                                                           ^
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
+  197 |         if (!is_range) assert(i == obj_size);
+      |                               ~~^~~~~~~~~~~
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_types.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:4,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/complex_to_complex.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/complex_to_complex_3d.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/timing/test0.cpp:3:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/timing/fftpack_timer.cpp:6:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27665,7 +27663,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g++ -o scitbx/lbfgsb/dev/driver3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver3.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27699,6 +27696,56 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain<int, 3>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    67 |     for (i = 0; i < opt_factors.size(); i++) {
       |                 ~~^~~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/lbfgsb/dev/driver1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver1.cpp
+g++ -o scitbx/lbfgsb/dev/driver2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver2.cpp
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_types.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/factorization.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/complex_to_complex.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/complex_to_complex_3d.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/fftpack/timing/test0.cpp:3:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   62 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |   ^~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
+   65 |   if (i >= sz) throw_range_error(); return beg[i]; \
+      |                                     ^~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+   48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
+      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/io.hpp:8,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/close_chain.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:6,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem.hpp:10,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/lbfgs_fem.hpp:1,
+                 from scitbx/lbfgs/sdrive_fem.cpp:1:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
+   63 |       if (i < sz) s[i++] = c;
+      |           ~~^~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27784,18 +27831,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/io.hpp:8,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/close_chain.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/read.hpp:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/major_types.hpp:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem.hpp:10,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/lbfgs_fem.hpp:1,
-                 from scitbx/lbfgs/sdrive_fem.cpp:1:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
-   63 |       if (i < sz) s[i++] = c;
-      |           ~~^~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    40 |       if (pos < 0 || pos >= command_line_args.buffer.size()) {
@@ -27821,17 +27856,22 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
   704 |             while (pos < internal_file_len) {
       |                    ~~~~^~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/array_family/tst_unsigned_float_arithmetic -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_unsigned_float_arithmetic.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o scitbx/array_family/tst_ref_matrix_facet -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_ref_matrix_facet.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o scitbx/array_family/tst_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
+g++ -o scitbx/lbfgsb/dev/driver3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver3.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/array_family/tst_af_5 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_5.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
 g++ -o scitbx/math/tests/tst.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/math/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/tests/tst.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/error/tst_error -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/error/tst_error.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o scitbx/matrix/tests/tst_cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests/tst_cholesky.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o scitbx/array_family/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-g++ -o scitbx/array_family/tst_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
-g++ -o scitbx/array_family/tst_accessors -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_accessors.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o scitbx/array_family/tst_vec3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_vec3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
+g++ -o scitbx/matrix/tests/tst_givens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests/tst_givens.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27858,9 +27898,11 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/matrix/tests/tst_householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests/tst_householder.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:6,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:1:
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:1:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -27913,58 +27955,68 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain<ElementType>::at(size_type) const’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type) const’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |   ^~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
    65 |   if (i >= sz) throw_range_error(); return beg[i]; \
       |                                     ^~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
-  277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
+  107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1<ElementType>&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string<char>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:102:19:   required from here
+  102 |         write_ref1(" ", x);
+      |         ~~~~~~~~~~^~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  184 |     for(int i=1;i<=a.size();i++) {
+      |                 ~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  188 |           for(int j=0;j<label.size();j++) {
+      |                       ~^~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -28047,12 +28099,12 @@
       |       ~~~~~~
  4457 |       enable_stp_init);
       |       ~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11:   required from here
-   69 |     setulb(
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:70:11:   required from here
+   70 |     setulb(
       |     ~~~~~~^
-   70 |       n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint,
+   71 |       n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint,
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-   71 |       csave,lsave,isave,dsave);
+   72 |       csave,lsave,isave,dsave);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
  3671 |     SCITBX_ASSERT(x.size() == n);
@@ -28094,19 +28146,12 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’
  3675 |     SCITBX_ASSERT(g.size() == n);
       |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1<ElementType>&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string<char>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:974:19:   required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1<ElementType>&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string<char>]’
-  974 |         write_ref1(" X =", x);
-      |         ~~~~~~~~~~^~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3786:15:   required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, FloatType&, const ref1<ElementType>&, const FloatType&, const FloatType&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, const ref1<int>&, const ref1<int>&, std::string&, const int&, std::string&, const ref1<bool>&, const ref1<int>&, const ref1<ElementType>&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string<char>]’
- 3786 |         prn3lb(n,x,f,task,iprint,info,itfile,
-      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
- 3787 |                iter,nfgv,nintol,nskip,nact,sbgnrm,
-      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
- 3788 |                zero,nint,word,iback,stp,xstep,k,
-      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
- 3789 |                cachyt,sbtime,lnscht);
-      |                ~~~~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/lbfgs/sdrive_fem -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/sdrive_fem.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
+In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/serialization/base_256.h:2,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/floating_point_epsilon.h:4,
+                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:5:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, FloatType&, const ref1<ElementType>&, const FloatType&, const FloatType&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, const ref1<int>&, const ref1<int>&, std::string&, const int&, std::string&, const ref1<bool>&, const ref1<int>&, const ref1<ElementType>&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string<char>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:4433:11:   required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, FloatType&, const ref1<ElementType>&, const FloatType&, const FloatType&, const ref1<ElementType>&, const ref1<int>&, std::string&, const int&, std::string&, const ref1<bool>&, const ref1<int>&, const ref1<ElementType>&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string<char>]’
  4433 |     mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol,
       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
@@ -28165,28 +28210,59 @@
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    71 |       csave,lsave,isave,dsave);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  184 |     for(int i=1;i<=a.size();i++) {
-      |                 ~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  188 |           for(int j=0;j<label.size();j++) {
-      |                       ~^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
+ 3671 |     SCITBX_ASSERT(x.size() == n);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’
+ 3671 |     SCITBX_ASSERT(x.size() == n);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
+ 3672 |     SCITBX_ASSERT(l.size() == n);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’
+ 3672 |     SCITBX_ASSERT(l.size() == n);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
+ 3673 |     SCITBX_ASSERT(u.size() == n);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’
+ 3673 |     SCITBX_ASSERT(u.size() == n);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
+ 3674 |     SCITBX_ASSERT(nbd.size() == n);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’
+ 3674 |     SCITBX_ASSERT(nbd.size() == n);
+      |     ^~~~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
+ 3675 |     SCITBX_ASSERT(g.size() == n);
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
+  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
+      |         ^~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’
+ 3675 |     SCITBX_ASSERT(g.size() == n);
+      |     ^~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1<ElementType>&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string<char>]’:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:102:19:   required from here
-  102 |         write_ref1(" ", x);
-      |         ~~~~~~~~~~^~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  184 |     for(int i=1;i<=a.size();i++) {
-      |                 ~^~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
-  188 |           for(int j=0;j<label.size();j++) {
-      |                       ~^~~~~~~~~~~~~
-g++ -o scitbx/matrix/tests/tst_cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests/tst_cholesky.cpp
-In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/serialization/base_256.h:2,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/floating_point_epsilon.h:4,
-                 from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:5:
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, FloatType&, const ref1<ElementType>&, const FloatType&, const FloatType&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, const ref1<int>&, const ref1<int>&, std::string&, const int&, std::string&, const ref1<bool>&, const ref1<int>&, const ref1<ElementType>&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string<char>]’:
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:974:19:   required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1<ElementType>&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string<char>]’
+  974 |         write_ref1(" X =", x);
+      |         ~~~~~~~~~~^~~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3786:15:   required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, FloatType&, const ref1<ElementType>&, const FloatType&, const FloatType&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref2<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, const ref1<int>&, const ref1<int>&, std::string&, const int&, std::string&, const ref1<bool>&, const ref1<int>&, const ref1<ElementType>&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string<char>]’
+ 3786 |         prn3lb(n,x,f,task,iprint,info,itfile,
+      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+ 3787 |                iter,nfgv,nintol,nskip,nact,sbgnrm,
+      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+ 3788 |                zero,nint,word,iback,stp,xstep,k,
+      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+ 3789 |                cachyt,sbtime,lnscht);
+      |                ~~~~~~~~~~~~~~~~~~~~~
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:4433:11:   required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<ElementType>&, const ref1<int>&, FloatType&, const ref1<ElementType>&, const FloatType&, const FloatType&, const ref1<ElementType>&, const ref1<int>&, std::string&, const int&, std::string&, const ref1<bool>&, const ref1<int>&, const ref1<ElementType>&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string<char>]’
  4433 |     mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol,
       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
@@ -28238,58 +28314,21 @@
       |       ~~~~~~
  4457 |       enable_stp_init);
       |       ~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:70:11:   required from here
-   70 |     setulb(
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11:   required from here
+   69 |     setulb(
       |     ~~~~~~^
-   71 |       n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint,
+   70 |       n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint,
       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-   72 |       csave,lsave,isave,dsave);
+   71 |       csave,lsave,isave,dsave);
       |       ~~~~~~~~~~~~~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
- 3671 |     SCITBX_ASSERT(x.size() == n);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’
- 3671 |     SCITBX_ASSERT(x.size() == n);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
- 3672 |     SCITBX_ASSERT(l.size() == n);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’
- 3672 |     SCITBX_ASSERT(l.size() == n);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
- 3673 |     SCITBX_ASSERT(u.size() == n);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’
- 3673 |     SCITBX_ASSERT(u.size() == n);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<int, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
- 3674 |     SCITBX_ASSERT(nbd.size() == n);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’
- 3674 |     SCITBX_ASSERT(nbd.size() == n);
-      |     ^~~~~~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
- 3675 |     SCITBX_ASSERT(g.size() == n);
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’
-  166 |   if (!(assertion)) throw error_class(__FILE__, __LINE__, \
-      |         ^~~~~~~~~
-/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’
- 3675 |     SCITBX_ASSERT(g.size() == n);
-      |     ^~~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/matrix/tests/tst_givens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests/tst_givens.cpp
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref<double, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  184 |     for(int i=1;i<=a.size();i++) {
+      |                 ~^~~~~~~~~~
+/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
+  188 |           for(int j=0;j<label.size();j++) {
+      |                       ~^~~~~~~~~~~~~
+g++ -o scitbx/matrix/tests/tst_svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests/tst_svd.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/array_family/tst_vec3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_vec3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
-g++ -o scitbx/matrix/tests/tst_householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests/tst_householder.cpp
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/ref.h:8,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:6,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver3.cpp:1:
@@ -28319,6 +28358,11 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
    48 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N)
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o lib/scitbx_sparse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_sparse_ext.so.0 scitbx/sparse/boost_python/vector.o scitbx/sparse/boost_python/matrix.o scitbx/sparse/boost_python/approx_equal.o scitbx/sparse/boost_python/random.o scitbx/sparse/boost_python/lu_factorization.o scitbx/sparse/boost_python/sparse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/lbfgs/tst_lbfgs -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/tst_lbfgs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
+g++ -o scitbx/array_family/tst_sym_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_sym_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
+g++ -o scitbx/serialization/tst_base_256.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/serialization -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/serialization /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/serialization/tst_base_256.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain<ElementType, N>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -28345,6 +28389,8 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   107 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+g++ -o scitbx/sparse/tests/tst_sparse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/sparse/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/tests/tst_sparse.cpp
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain<ElementType>::at(size_type)’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
    62 |   if (i >= sz) throw_range_error(); return beg[i]; \
@@ -28371,8 +28417,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’
   277 |       SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain,
       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/matrix/tests/tst_svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/matrix/tests/tst_svd.cpp
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1<ElementType>&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string<char>]’:
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/dev/driver3.cpp:82:19:   required from here
    82 |         write_ref1(" ", wa.get1(j+1,n));
@@ -28383,8 +28427,6 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   188 |           for(int j=0;j<label.size();j++) {
       |                       ~^~~~~~~~~~~~~
-g++ -o scitbx/array_family/tst_sym_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_sym_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 In file included from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/error.h:16,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/serialization/base_256.h:2,
                  from /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/math/floating_point_epsilon.h:4,
@@ -28488,72 +28530,66 @@
 /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’
  3675 |     SCITBX_ASSERT(g.size() == n);
       |     ^~~~~~~~~~~~~
-g++ -o scitbx/serialization/tst_base_256.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/serialization -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/serialization /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/serialization/tst_base_256.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/sparse/tests/tst_sparse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Iscitbx/sparse/tests -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/tests /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/scitbx/sparse/tests/tst_sparse.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp
-cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
 g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/tests/tst_reparametrisation.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o mmtbx/masks/tst_mask -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread mmtbx/masks/tst_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_masks -liotbx_pdb -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm
 g++ -o smtbx/refinement/constraints/tests/tst_special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/smtbx/refinement/constraints/tests/tst_special_position.cpp
 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
-g++ -o scitbx/lbfgs/sdrive_fem -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/sdrive_fem.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
-g++ -o scitbx/lbfgs/tst_lbfgs -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/tst_lbfgs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
-g++ -o scitbx/math/tests/tst -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/math/tests/tst.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-g++ -o lib/scitbx_stl_vector_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_vector_ext.so.0 scitbx/stl/vector_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/scitbx_stl_vector_ext.so.0.0.1'
-    'lib/scitbx_stl_vector_ext.so.0'->'lib/scitbx_stl_vector_ext.so.0.0.1'
-    'lib/scitbx_stl_vector_ext.so'->'lib/scitbx_stl_vector_ext.so.0.0.1'
-g++ -o scitbx/matrix/tests/tst_givens -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_givens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
+g++ -o scitbx/array_family/tst_accessors -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_accessors.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o mmtbx/masks/tst_mask -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread mmtbx/masks/tst_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lmmtbx_masks -liotbx_pdb -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm
+Create symlinks for: 'lib/scitbx_sparse_ext.so.0.0.1'
+    'lib/scitbx_sparse_ext.so.0'->'lib/scitbx_sparse_ext.so.0.0.1'
+    'lib/scitbx_sparse_ext.so'->'lib/scitbx_sparse_ext.so.0.0.1'
+g++ -o lib/smtbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_stl_map_ext.so.0 smtbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/scitbx_suffixtree_single_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_single_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_single_ext.o scitbx/suffixtree/boost_python/object_extensions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/serialization/tst_base_256 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/serialization/tst_base_256.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
+g++ -o lib/spotfinder_hough_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_hough_ext.so.0 spotfinder/core_toolbox/boost_python/hough_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/smtbx_stl_map_ext.so.0.0.1'
+    'lib/smtbx_stl_map_ext.so.0'->'lib/smtbx_stl_map_ext.so.0.0.1'
+    'lib/smtbx_stl_map_ext.so'->'lib/smtbx_stl_map_ext.so.0.0.1'
+g++ -o scitbx/math/tests/tst -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/math/tests/tst.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 Create symlinks for: 'lib/scitbx_suffixtree_single_ext.so.0.0.1'
     'lib/scitbx_suffixtree_single_ext.so.0'->'lib/scitbx_suffixtree_single_ext.so.0.0.1'
     'lib/scitbx_suffixtree_single_ext.so'->'lib/scitbx_suffixtree_single_ext.so.0.0.1'
-g++ -o lib/spotfinder_hough_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_hough_ext.so.0 spotfinder/core_toolbox/boost_python/hough_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/array_family/tst_af_1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 Create symlinks for: 'lib/spotfinder_hough_ext.so.0.0.1'
     'lib/spotfinder_hough_ext.so.0'->'lib/spotfinder_hough_ext.so.0.0.1'
     'lib/spotfinder_hough_ext.so'->'lib/spotfinder_hough_ext.so.0.0.1'
+g++ -o scitbx/matrix/tests/tst_givens -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_givens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o scitbx/serialization/tst_base_256 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/serialization/tst_base_256.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
+g++ -o scitbx/array_family/tst_af_1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 g++ -o scitbx/fftpack/timing/fftpack_timer -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/fftpack_timer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lomptbx -lm
-g++ -o scitbx/lbfgsb/dev/driver1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_timer -lboost_chrono -lm
-g++ -o scitbx/lbfgsb/dev/driver2 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_timer -lboost_chrono -lm
 g++ -o scitbx/array_family/boost_python/regression_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=regression_test_ext.so.0 scitbx/array_family/boost_python/regression_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313
+g++ -o scitbx/lbfgsb/dev/driver1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_timer -lboost_chrono -lm
 Create symlinks for: 'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1'
     'scitbx/array_family/boost_python/regression_test_ext.so.0'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1'
     'scitbx/array_family/boost_python/regression_test_ext.so'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1'
 g++ -o scitbx/lbfgsb/dev/driver3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_timer -lboost_chrono -lm
-g++ -o lib/scitbx_sparse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_sparse_ext.so.0 scitbx/sparse/boost_python/vector.o scitbx/sparse/boost_python/matrix.o scitbx/sparse/boost_python/approx_equal.o scitbx/sparse/boost_python/random.o scitbx/sparse/boost_python/lu_factorization.o scitbx/sparse/boost_python/sparse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+g++ -o scitbx/lbfgsb/dev/driver2 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_timer -lboost_chrono -lm
+g++ -o lib/scitbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_math_ext.so.0 scitbx/math/boost_python/math_ext.o scitbx/math/boost_python/basic_statistics.o scitbx/math/boost_python/gaussian.o scitbx/math/boost_python/golay.o scitbx/math/boost_python/minimum_covering_sphere.o scitbx/math/boost_python/principal_axes_of_inertia.o scitbx/math/boost_python/row_echelon.o scitbx/math/boost_python/tensor_rank_2.o scitbx/math/boost_python/chebyshev.o scitbx/math/boost_python/icosahedron.o scitbx/math/boost_python/slatec.o scitbx/math/boost_python/line_search.o scitbx/math/boost_python/r3_rotation.o scitbx/math/boost_python/resample.o scitbx/math/boost_python/quadrature.o scitbx/math/boost_python/unimodular_generator.o scitbx/math/boost_python/halton.o scitbx/math/boost_python/least_squares_plane.o scitbx/math/boost_python/continued_fraction.o scitbx/math/boost_python/numeric_limits.o scitbx/math/boost_python/distributions.o scitbx/math/boost_python/exp_functions.o scitbx/math/boost_python/zernike.o scitbx/math/boost_python/zernike_moments.o scitbx/math/boost_python/2d_zernike_moments.o scitbx/math/boost_python/weighted_covariance.o scitbx/math/boost_python/rotation.o scitbx/math/boost_python/interpolation.o scitbx/math/boost_python/tetrahedron.o scitbx/math/boost_python/angle_derivative.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_slatec -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o scitbx/fftpack/timing/test0 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/test0.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system -lomptbx -lm
 g++ -o scitbx/matrix/tests/tst_svd -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_svd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-Create symlinks for: 'lib/scitbx_sparse_ext.so.0.0.1'
-    'lib/scitbx_sparse_ext.so.0'->'lib/scitbx_sparse_ext.so.0.0.1'
-    'lib/scitbx_sparse_ext.so'->'lib/scitbx_sparse_ext.so.0.0.1'
 g++ -o scitbx/matrix/tests/tst_cholesky -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_cholesky.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
-g++ -o scitbx/matrix/tests/tst_householder -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_householder.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 g++ -o lib/scitbx_rigid_body_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_rigid_body_ext.so.0 scitbx/rigid_body/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o scitbx/sparse/tests/tst_sparse -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/sparse/tests/tst_sparse.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+Create symlinks for: 'lib/scitbx_math_ext.so.0.0.1'
+    'lib/scitbx_math_ext.so.0'->'lib/scitbx_math_ext.so.0.0.1'
+    'lib/scitbx_math_ext.so'->'lib/scitbx_math_ext.so.0.0.1'
 Create symlinks for: 'lib/scitbx_rigid_body_ext.so.0.0.1'
     'lib/scitbx_rigid_body_ext.so.0'->'lib/scitbx_rigid_body_ext.so.0.0.1'
     'lib/scitbx_rigid_body_ext.so'->'lib/scitbx_rigid_body_ext.so.0.0.1'
+g++ -o scitbx/matrix/tests/tst_householder -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_householder.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
+g++ -o lib/scitbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_map_ext.so.0 scitbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/spotfinder_dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_dxtbx_ext.so.0 spotfinder/dxtbx_toolbox/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -ldxtbxspotfinder -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/scitbx_stl_map_ext.so.0.0.1'
+    'lib/scitbx_stl_map_ext.so.0'->'lib/scitbx_stl_map_ext.so.0.0.1'
+    'lib/scitbx_stl_map_ext.so'->'lib/scitbx_stl_map_ext.so.0.0.1'
 Create symlinks for: 'lib/spotfinder_dxtbx_ext.so.0.0.1'
     'lib/spotfinder_dxtbx_ext.so.0'->'lib/spotfinder_dxtbx_ext.so.0.0.1'
     'lib/spotfinder_dxtbx_ext.so'->'lib/spotfinder_dxtbx_ext.so.0.0.1'
-g++ -o lib/scitbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_math_ext.so.0 scitbx/math/boost_python/math_ext.o scitbx/math/boost_python/basic_statistics.o scitbx/math/boost_python/gaussian.o scitbx/math/boost_python/golay.o scitbx/math/boost_python/minimum_covering_sphere.o scitbx/math/boost_python/principal_axes_of_inertia.o scitbx/math/boost_python/row_echelon.o scitbx/math/boost_python/tensor_rank_2.o scitbx/math/boost_python/chebyshev.o scitbx/math/boost_python/icosahedron.o scitbx/math/boost_python/slatec.o scitbx/math/boost_python/line_search.o scitbx/math/boost_python/r3_rotation.o scitbx/math/boost_python/resample.o scitbx/math/boost_python/quadrature.o scitbx/math/boost_python/unimodular_generator.o scitbx/math/boost_python/halton.o scitbx/math/boost_python/least_squares_plane.o scitbx/math/boost_python/continued_fraction.o scitbx/math/boost_python/numeric_limits.o scitbx/math/boost_python/distributions.o scitbx/math/boost_python/exp_functions.o scitbx/math/boost_python/zernike.o scitbx/math/boost_python/zernike_moments.o scitbx/math/boost_python/2d_zernike_moments.o scitbx/math/boost_python/weighted_covariance.o scitbx/math/boost_python/rotation.o scitbx/math/boost_python/interpolation.o scitbx/math/boost_python/tetrahedron.o scitbx/math/boost_python/angle_derivative.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_slatec -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
-g++ -o smtbx/refinement/constraints/tests/tst_special_position -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_special_position.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system
+g++ -o scitbx/sparse/tests/tst_sparse -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/sparse/tests/tst_sparse.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lboost_thread -lboost_system
 g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_reparametrisation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system
+g++ -o smtbx/refinement/constraints/tests/tst_special_position -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_special_position.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system
 g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system
-Create symlinks for: 'lib/scitbx_math_ext.so.0.0.1'
-    'lib/scitbx_math_ext.so.0'->'lib/scitbx_math_ext.so.0.0.1'
-    'lib/scitbx_math_ext.so'->'lib/scitbx_math_ext.so.0.0.1'
-g++ -o lib/scitbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_map_ext.so.0 scitbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm
 g++ -o lib/smtbx_refinement_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_restraints_ext.so.0 smtbx/refinement/restraints/boost_python/origin_fixing.o smtbx/refinement/restraints/boost_python/restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/scitbx_stl_map_ext.so.0.0.1'
-    'lib/scitbx_stl_map_ext.so.0'->'lib/scitbx_stl_map_ext.so.0.0.1'
-    'lib/scitbx_stl_map_ext.so'->'lib/scitbx_stl_map_ext.so.0.0.1'
 Create symlinks for: 'lib/smtbx_refinement_restraints_ext.so.0.0.1'
     'lib/smtbx_refinement_restraints_ext.so.0'->'lib/smtbx_refinement_restraints_ext.so.0.0.1'
     'lib/smtbx_refinement_restraints_ext.so'->'lib/smtbx_refinement_restraints_ext.so.0.0.1'
@@ -28562,14 +28598,14 @@
     'lib/spotfinder_distltbx_ext.so.0'->'lib/spotfinder_distltbx_ext.so.0.0.1'
     'lib/spotfinder_distltbx_ext.so'->'lib/spotfinder_distltbx_ext.so.0.0.1'
 g++ -o scitbx/array_family/tst_af_4 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_4.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lm
-g++ -o lib/smtbx_structure_factors_direct_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_structure_factors_direct_ext.so.0 smtbx/structure_factors/direct/boost_python/ext.o smtbx/structure_factors/direct/boost_python/standard_xray.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
-Create symlinks for: 'lib/smtbx_structure_factors_direct_ext.so.0.0.1'
-    'lib/smtbx_structure_factors_direct_ext.so.0'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1'
-    'lib/smtbx_structure_factors_direct_ext.so'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1'
 g++ -o lib/smtbx_refinement_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_constraints_ext.so.0 smtbx/refinement/constraints/boost_python/affine.o smtbx/refinement/constraints/boost_python/constraints_ext.o smtbx/refinement/constraints/boost_python/direction.o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o smtbx/refinement/constraints/boost_python/occupancy.o smtbx/refinement/constraints/boost_python/reparametrisation.o smtbx/refinement/constraints/boost_python/rigid.o smtbx/refinement/constraints/boost_python/same_group.o smtbx/refinement/constraints/boost_python/scaled_adp.o smtbx/refinement/constraints/boost_python/scatterer_parameters.o smtbx/refinement/constraints/boost_python/shared.o smtbx/refinement/constraints/boost_python/special_position.o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/smtbx_refinement_constraints_ext.so.0.0.1'
     'lib/smtbx_refinement_constraints_ext.so.0'->'lib/smtbx_refinement_constraints_ext.so.0.0.1'
     'lib/smtbx_refinement_constraints_ext.so'->'lib/smtbx_refinement_constraints_ext.so.0.0.1'
+g++ -o lib/smtbx_structure_factors_direct_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_structure_factors_direct_ext.so.0 smtbx/structure_factors/direct/boost_python/ext.o smtbx/structure_factors/direct/boost_python/standard_xray.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
+Create symlinks for: 'lib/smtbx_structure_factors_direct_ext.so.0.0.1'
+    'lib/smtbx_structure_factors_direct_ext.so.0'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1'
+    'lib/smtbx_structure_factors_direct_ext.so'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1'
 g++ -o lib/smtbx_refinement_least_squares_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_least_squares_ext.so.0 smtbx/refinement/boost_python/least_squares_ext.o smtbx/refinement/boost_python/weighting_schemes.o smtbx/refinement/boost_python/least_squares.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm
 Create symlinks for: 'lib/smtbx_refinement_least_squares_ext.so.0.0.1'
     'lib/smtbx_refinement_least_squares_ext.so.0'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1'
@@ -28583,8 +28619,8 @@
     'lib/scitbx_array_family_flex_ext.so.0'->'lib/scitbx_array_family_flex_ext.so.0.0.1'
     'lib/scitbx_array_family_flex_ext.so'->'lib/scitbx_array_family_flex_ext.so.0.0.1'
 scons: done building targets.
-usr+sys time: 57.85 seconds
-wall clock time: 7 minutes 35.47 seconds (455.47 seconds total)
+usr+sys time: 51.75 seconds
+wall clock time: 7 minutes 21.10 seconds (441.10 seconds total)
 iconv -f ISO-8859-1 -t UTF-8 cctbx/eltbx/covalent_radii.h > covalent_radii.h
 mv covalent_radii.h cctbx/eltbx/covalent_radii.h
 # cp all extensions into the python build directory
@@ -28631,7764 +28667,7764 @@
   self.initialize_options()
 running build
 running build_py
-copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
-copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
-copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
 copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx
 copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx
-copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
+copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
+copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
+copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx
 copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
 copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
+copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx
 copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators
 copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators
 running install_lib
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
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-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/log.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/log.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
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+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
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 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
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+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
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-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
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 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
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+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
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 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/watch_file.py to watch_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/glu.py to glu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl.py to gl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/fonts.py to fonts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/images.py to images.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/quadrics.py to quadrics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/read.py to read.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/cout.py to cout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/read.py to read.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/cout.py to cout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/split.py to split.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout.py to tst_cout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_read.py to tst_read.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tokenization.py to tokenization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/intrinsics.py to intrinsics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/equivalence.py to equivalence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/frames.py to frames.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/python.py to python.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/clashes.py to clashes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/grow_density.py to grow_density.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/find.py to find.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_4.py to tst_add_hydrogen_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_1.py to tst_add_hydrogen_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/map_tools.py to map_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/identify.py to identify.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/environment.py to environment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/build.py to build.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/halides.py to halides.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/group.py to group.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights.py to weights.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/data.py to data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/orca.py to orca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/targets.py to targets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/proq2.py to proq2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/msa.py to msa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/superpose.py to superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/super.py to super.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maps.py to maps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/polder.py to polder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/f000.py to f000.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/angle.py to angle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls.py to tls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mask.py to mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fetch.py to fetch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/polder.py to polder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mask.py to mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/topology.py to topology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/clash.py to clash.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/asa.py to asa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/waters.py to waters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/phi_psi_2_data.py to phi_psi_2_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip.py to xmanip.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suites.py to suites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absences.py to absences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fem.py to fem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/polder.py to polder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/kick.py to kick.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/lattice.py to lattice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/statistics.py to statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/model.py to model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/refinement.py to refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/output.py to output.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/geostd_utils.py to geostd_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/server.py to server.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tools.py to tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/arrays.py to arrays.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_lrv.py to tst_lrv.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_arginine_geometry.py to tst_arginine_geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain_cif.py to tst_minimize_chain_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ribbons.py to tst_ribbons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-313.pyc
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+creating /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/time.py to time.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/index.py to index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/scope.py to scope.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/preferences.py to preferences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/index.py to index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/solver.py to solver.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/create.py to create.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/constants.py to constants.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/integration.py to integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/display.py to display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/processing.py to processing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/controls.py to controls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/frame.py to frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/flex.py to flex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark1.py to mark1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark10.py to mark10.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark0.py to mark0.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark3.py to mark3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/preference.py to preference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/mp.py to mp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/weather.py to weather.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/drift.py to drift.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/split_detector.py to split_detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/task.py to task.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/stats.py to stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/tag.py to tag.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/job.py to job.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/run.py to run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/trial.py to trial.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/refine.py to refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/absorption.py to absorption.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/worker.py to worker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-313.pyc
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:724: SyntaxWarning: invalid escape sequence '\o'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:739: SyntaxWarning: invalid escape sequence '\o'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:740: SyntaxWarning: invalid escape sequence '\o'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:759: SyntaxWarning: invalid escape sequence '\o'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:778: SyntaxWarning: invalid escape sequence '\s'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:807: SyntaxWarning: invalid escape sequence '\m'
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/application.py to application.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/api.py to api.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster.py to cluster.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/drift.py to drift.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/weather.py to weather.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/striping.py to striping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/preference.py to preference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/metrology.py to metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/riso.py to riso.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/striping.py to striping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/metrology.py to metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/weather.py to weather.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/riso.py to riso.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/drift.py to drift.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/graph.py to graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/components.py to components.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/api.py to api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster.py to cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/trial.py to trial.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/run.py to run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/job.py to job.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/task.py to task.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/tag.py to tag.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/stats.py to stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark0.py to mark0.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark1.py to mark1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark10.py to mark10.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark3.py to mark3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/mp.py to mp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/drift.py to drift.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/weather.py to weather.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/preference.py to preference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/split_detector.py to split_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/graph.py to graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/components.py to components.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/application.py to application.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/worker.py to worker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-313.pyc
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:724: SyntaxWarning: invalid escape sequence '\o'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:739: SyntaxWarning: invalid escape sequence '\o'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:740: SyntaxWarning: invalid escape sequence '\o'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:759: SyntaxWarning: invalid escape sequence '\o'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:778: SyntaxWarning: invalid escape sequence '\s'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:807: SyntaxWarning: invalid escape sequence '\m'
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/absorption.py to absorption.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/refine.py to refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/simulate.py to simulate.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/isoform.py to isoform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minimizers.py to minimizers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/map.py to map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/set.py to set.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/vector.py to vector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minpack.py to minpack.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/clustering.py to clustering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/superpose.py to superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/besselk.py to besselk.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/ext.py to ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/spe.py to spe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/distributions.py to distributions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/farey.py to farey.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/simplex.py to simplex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/shared.py to shared.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/flex.py to flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/functions.py to functions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/ext.py to ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/svd.py to svd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/householder.py to householder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/misc.py to misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/single.py to single.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/fftpack.py to fftpack.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/optional.py to optional.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/smoothing.py to smoothing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/console_utils.py to console_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/simplexml.py to simplexml.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/table_utils.py to table_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyframe.py to pyframe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/wingide.py to wingide.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/dlite.py to dlite.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/console_utils.py to console_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/command_line.py to command_line.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/interface.py to interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/experimental.py to experimental.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/parser.py to parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/log.py to log.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/path.py to path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/result.py to result.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/math_utils.py to math_utils.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/version.py to version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/load_env.py to load_env.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cli.py to cli.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/callbacks.py to callbacks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/containers.py to containers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/path.py to path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/complex_math.py to complex_math.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/smart_open.py to smart_open.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyplot.py to pyplot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_version.py to tst_version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/dlite.py to dlite.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_path.py to tst_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install.py to install.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install.py to install.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/scons.py to scons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/help.py to help.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/scons.py to scons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/help.py to help.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_path.py to tst_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyframe.py to pyframe.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/introspection.py to introspection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/load_env.py to load_env.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_template.py to program_template.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/interface.py to interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/parser.py to parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/command_line.py to command_line.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/experimental.py to experimental.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cluster.py to cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/math_utils.py to math_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_version.py to tst_version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/env_config.py to env_config.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/wingide.py to wingide.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/result.py to result.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/binary_search.py to binary_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/str_utils.py to str_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/configure.py to configure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyplot.py to pyplot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/table_utils.py to table_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/callbacks.py to callbacks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/str_utils.py to str_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/version.py to version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/binary_search.py to binary_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_run.py to easy_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/timers.py to timers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/option_parser.py to option_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/citations.py to citations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/objgraph.py to objgraph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/progress.py to progress.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/complex_math.py to complex_math.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/introspection.py to introspection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/citations.py to citations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/configure.py to configure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/log.py to log.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/result.py to result.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/timers.py to timers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_template.py to program_template.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cli.py to cli.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/env_config.py to env_config.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/simplexml.py to simplexml.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cluster.py to cluster.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/progress.py to progress.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/containers.py to containers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/icons.py to icons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/blast.py to blast.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/process_control.py to process_control.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/tables.py to tables.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/result.py to result.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/objgraph.py to objgraph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/smart_open.py to smart_open.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/windows.py to windows.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/listeditor.py to listeditor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/xtriage.py to xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/b_plot.py to b_plot.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/app.py to app.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/monitor.py to monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/errors.py to errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/layout.py to layout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/errors.py to errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/b_plot.py to b_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon.py to polygon.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/info_panels.py to info_panels.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/layout.py to layout.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/browser.py to browser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/listeditor.py to listeditor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/icons.py to icons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/xtriage.py to xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/tables.py to tables.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/path.py to path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/browser.py to browser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/info_panels.py to info_panels.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/windows.py to windows.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/version.py to version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nexus.py to nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Format.py to Format.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatESSNMX.py to FormatESSNMX.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/image.py to image.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Registry.py to Registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/load.py to load.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/filename.py to filename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/xds.py to xds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-313.pyc
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-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/datablock.py to datablock.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/overload.py to overload.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache.py to filecache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/ext.py to ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/beam.py to beam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/profile.py to profile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector.py to detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/crystal.py to crystal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan.py to scan.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/compare.py to compare.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/imageset.py to imageset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/flumpy.py to flumpy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-313.pyc
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-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/solver.py to solver.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/create.py to create.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/frame.py to frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/integration.py to integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/display.py to display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/processing.py to processing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/controls.py to controls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/index.py to index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/constants.py to constants.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/scope.py to scope.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/preferences.py to preferences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/index.py to index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/flex.py to flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/device.py to device.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/time.py to time.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/process_control.py to process_control.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/blast.py to blast.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/misc.py to misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/fftpack.py to fftpack.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/simplex.py to simplex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/map.py to map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/set.py to set.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/vector.py to vector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minpack.py to minpack.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minimizers.py to minimizers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/svd.py to svd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/ext.py to ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/householder.py to householder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/smoothing.py to smoothing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/farey.py to farey.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/clustering.py to clustering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/ext.py to ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/distributions.py to distributions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/spe.py to spe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/superpose.py to superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/besselk.py to besselk.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/single.py to single.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/optional.py to optional.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/flex.py to flex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/shared.py to shared.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/functions.py to functions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/phil.py to phil.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pymol.py to pymol.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_tools.py to map_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/format.py to format.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/errors.py to errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/builders.py to builders.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/model.py to model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/geometry.py to geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/citations.py to citations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/validation.py to validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/emma.py to emma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/map.py to map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/development.py to development.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/refine.py to refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/masks.py to masks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_direction.py to tst_direction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_disorder.py to tst_disorder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_rigid.py to tst_rigid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_same_group.py to tst_same_group.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_occupancies.py to tst_occupancies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/symmetry.py to symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/poscar.py to poscar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/mar.py to mar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/models.py to models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/edf.py to edf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/noir.py to noir.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/npy.py to npy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/edf.py to edf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/noir.py to noir.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/npy.py to npy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/mar.py to mar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/model.py to model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/common.py to common.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_plots.py to data_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/map.py to map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/ext.py to ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/merge.py to merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/errors.py to errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/writer.py to writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/symmetry.py to symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders.py to builders.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/records.py to records.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/download.py to download.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py to utils.cpython-313.pyc
+/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py:18: SyntaxWarning: invalid escape sequence '\{'
+/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/'
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/format.py to format.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/wildcard.py to wildcard.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xparm.py to xparm.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xparm.py to xparm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/correction.py to correction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ranges.py to ranges.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/poscar.py to poscar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/emma.py to emma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/errors.py to errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/writer.py to writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/logfiles.py to logfiles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/wildcard.py to wildcard.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/option_parser.py to option_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pymol.py to pymol.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/file_reader.py to file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ranges.py to ranges.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/tst.py to tst.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/table_one.py to table_one.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders.py to builders.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/merge.py to merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/logfiles.py to logfiles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/map.py to map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/ext.py to ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phases.py to phases.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/models.py to models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/file_reader.py to file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/option_parser.py to option_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/download.py to download.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py to utils.cpython-313.pyc
-/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py:18: SyntaxWarning: invalid escape sequence '\{'
-/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/'
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/records.py to records.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/common.py to common.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/model.py to model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_manager.py to map_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/model.py to model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/validation.py to validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/errors.py to errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/citations.py to citations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/builders.py to builders.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/table_one.py to table_one.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_tools.py to map_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/device.py to device.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/frames.py to frames.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/run.py to run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/multipolar.py to multipolar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/dev.py to dev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/display.py to display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_examples.py to run_examples.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/statistics.py to statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/run.py to run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/imageset.py to imageset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/overload.py to overload.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/version.py to version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/datablock.py to datablock.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/load.py to load.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/xds.py to xds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/filename.py to filename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/ext.py to ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/crystal.py to crystal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/profile.py to profile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector.py to detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/compare.py to compare.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/beam.py to beam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan.py to scan.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Format.py to Format.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nexus.py to nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/image.py to image.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatESSNMX.py to FormatESSNMX.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Registry.py to Registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache.py to filecache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/flumpy.py to flumpy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache.py to apache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/exception.py to exception.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/flex.py to flex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/arrays.py to arrays.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_1.py to tst_add_hydrogen_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_4.py to tst_add_hydrogen_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/find.py to find.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mask.py to mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/polder.py to polder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fetch.py to fetch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/clashes.py to clashes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/proq2.py to proq2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/output.py to output.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/msa.py to msa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/environment.py to environment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/identify.py to identify.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/halides.py to halides.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/build.py to build.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/clash.py to clash.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/topology.py to topology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/asa.py to asa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mask.py to mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/angle.py to angle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/polder.py to polder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/super.py to super.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/f000.py to f000.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls.py to tls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maps.py to maps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/geostd_utils.py to geostd_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/server.py to server.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tools.py to tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip.py to xmanip.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suites.py to suites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absences.py to absences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/phi_psi_2_data.py to phi_psi_2_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/waters.py to waters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/lattice.py to lattice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/model.py to model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/statistics.py to statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/grow_density.py to grow_density.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain_cif.py to tst_minimize_chain_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ribbons.py to tst_ribbons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_arginine_geometry.py to tst_arginine_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_lrv.py to tst_lrv.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/kick.py to kick.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fem.py to fem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/polder.py to polder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/refinement.py to refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/superpose.py to superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights.py to weights.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/orca.py to orca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/data.py to data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/targets.py to targets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/group.py to group.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/map_tools.py to map_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/fonts.py to fonts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/images.py to images.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/glu.py to glu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/quadrics.py to quadrics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl.py to gl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/watch_file.py to watch_file.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/henke.py to henke.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/formula.py to formula.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/formula.py to formula.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/henke.py to henke.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/version.py to version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adptbx.py to adptbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/statistics.py to statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/display.py to display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/version.py to version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mem.py to mem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/box.py to box.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mask.py to mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/emma.py to emma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/replay.py to replay.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/shelx.py to shelx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/minimization.py to minimization.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/ext.py to ext.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/minimization.py to minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/ext.py to ext.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure.py to structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/math_module.py to math_module.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/translation_search.py to translation_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/math_module.py to math_module.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/flex.py to flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/dev.py to dev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/github.py to github.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/location_part.py to location_part.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/location_part.py to location_part.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/github.py to github.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adptbx.py to adptbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache.py to apache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/flex.py to flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/exception.py to exception.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_disorder.py to tst_disorder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_direction.py to tst_direction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_rigid.py to tst_rigid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_same_group.py to tst_same_group.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_occupancies.py to tst_occupancies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/map.py to map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/masks.py to masks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/refine.py to refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/development.py to development.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/emma.py to emma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/replay.py to replay.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/shelx.py to shelx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/multipolar.py to multipolar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mem.py to mem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mask.py to mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/box.py to box.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_examples.py to run_examples.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/read.py to read.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/equivalence.py to equivalence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tokenization.py to tokenization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/read.py to read.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/cout.py to cout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/split.py to split.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/cout.py to cout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout.py to tst_cout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_read.py to tst_read.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/intrinsics.py to intrinsics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/python.py to python.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-313.pyc
 running install_egg_info
 running egg_info
 creating cctbx.egg-info
@@ -36440,7383 +36476,7383 @@
 running build
 running build_py
 running install_lib
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/log.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/log.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/development.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/annlib_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/images.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/util.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
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 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
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 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
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-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
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+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
 copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/watch_file.py to watch_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/glu.py to glu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl.py to gl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/fonts.py to fonts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/images.py to images.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/quadrics.py to quadrics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/read.py to read.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/cout.py to cout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/read.py to read.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/cout.py to cout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/split.py to split.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout.py to tst_cout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_read.py to tst_read.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tokenization.py to tokenization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/intrinsics.py to intrinsics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/equivalence.py to equivalence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/frames.py to frames.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/python.py to python.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/clashes.py to clashes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/grow_density.py to grow_density.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/find.py to find.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_4.py to tst_add_hydrogen_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_1.py to tst_add_hydrogen_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/map_tools.py to map_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/identify.py to identify.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/environment.py to environment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/build.py to build.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/halides.py to halides.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/group.py to group.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights.py to weights.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/data.py to data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/orca.py to orca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/targets.py to targets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/proq2.py to proq2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/msa.py to msa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/superpose.py to superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/super.py to super.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maps.py to maps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/polder.py to polder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/f000.py to f000.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/angle.py to angle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls.py to tls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mask.py to mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fetch.py to fetch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/polder.py to polder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mask.py to mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/topology.py to topology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/clash.py to clash.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/asa.py to asa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/waters.py to waters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/phi_psi_2_data.py to phi_psi_2_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip.py to xmanip.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suites.py to suites.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absences.py to absences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fem.py to fem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/polder.py to polder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/kick.py to kick.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/lattice.py to lattice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/statistics.py to statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/model.py to model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/refinement.py to refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/output.py to output.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/geostd_utils.py to geostd_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/server.py to server.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tools.py to tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/arrays.py to arrays.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_lrv.py to tst_lrv.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_arginine_geometry.py to tst_arginine_geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain_cif.py to tst_minimize_chain_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ribbons.py to tst_ribbons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-313.pyc
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/fable/utils.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+copying /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/time.py to time.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/index.py to index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/scope.py to scope.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/preferences.py to preferences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/index.py to index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/solver.py to solver.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/create.py to create.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/constants.py to constants.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/integration.py to integration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/display.py to display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/processing.py to processing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/controls.py to controls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/frame.py to frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/flex.py to flex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark1.py to mark1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark10.py to mark10.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark0.py to mark0.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark3.py to mark3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/preference.py to preference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/mp.py to mp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/weather.py to weather.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/drift.py to drift.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/split_detector.py to split_detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/task.py to task.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/stats.py to stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/tag.py to tag.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/job.py to job.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/run.py to run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/trial.py to trial.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/refine.py to refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/absorption.py to absorption.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/worker.py to worker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-313.pyc
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:724: SyntaxWarning: invalid escape sequence '\o'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:739: SyntaxWarning: invalid escape sequence '\o'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:740: SyntaxWarning: invalid escape sequence '\o'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:759: SyntaxWarning: invalid escape sequence '\o'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:778: SyntaxWarning: invalid escape sequence '\s'
+/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:807: SyntaxWarning: invalid escape sequence '\m'
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/application.py to application.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/api.py to api.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster.py to cluster.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/drift.py to drift.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/weather.py to weather.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/striping.py to striping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/preference.py to preference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/metrology.py to metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/riso.py to riso.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/striping.py to striping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/metrology.py to metrology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/weather.py to weather.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/riso.py to riso.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/drift.py to drift.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/graph.py to graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/components.py to components.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/api.py to api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster.py to cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/trial.py to trial.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/run.py to run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/job.py to job.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/task.py to task.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/tag.py to tag.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/stats.py to stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark0.py to mark0.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark1.py to mark1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark10.py to mark10.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark3.py to mark3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/mp.py to mp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/drift.py to drift.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/weather.py to weather.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/preference.py to preference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/split_detector.py to split_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/graph.py to graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/components.py to components.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/application.py to application.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/worker.py to worker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-313.pyc
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:724: SyntaxWarning: invalid escape sequence '\o'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:739: SyntaxWarning: invalid escape sequence '\o'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:740: SyntaxWarning: invalid escape sequence '\o'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:759: SyntaxWarning: invalid escape sequence '\o'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:778: SyntaxWarning: invalid escape sequence '\s'
-/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:807: SyntaxWarning: invalid escape sequence '\m'
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/absorption.py to absorption.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/refine.py to refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/simulate.py to simulate.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/isoform.py to isoform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minimizers.py to minimizers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/map.py to map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/set.py to set.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/vector.py to vector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minpack.py to minpack.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/clustering.py to clustering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/superpose.py to superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/besselk.py to besselk.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/ext.py to ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/spe.py to spe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/distributions.py to distributions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/farey.py to farey.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/simplex.py to simplex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/shared.py to shared.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/flex.py to flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/functions.py to functions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/ext.py to ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/svd.py to svd.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/householder.py to householder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/misc.py to misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/single.py to single.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/fftpack.py to fftpack.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/optional.py to optional.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/smoothing.py to smoothing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/console_utils.py to console_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/simplexml.py to simplexml.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/table_utils.py to table_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyframe.py to pyframe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/wingide.py to wingide.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/dlite.py to dlite.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/console_utils.py to console_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/command_line.py to command_line.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/interface.py to interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/experimental.py to experimental.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/parser.py to parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/log.py to log.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/path.py to path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/result.py to result.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/math_utils.py to math_utils.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/version.py to version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/load_env.py to load_env.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cli.py to cli.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/callbacks.py to callbacks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/containers.py to containers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/path.py to path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/complex_math.py to complex_math.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/smart_open.py to smart_open.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyplot.py to pyplot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_version.py to tst_version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/dlite.py to dlite.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_path.py to tst_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install.py to install.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install.py to install.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/scons.py to scons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/help.py to help.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/scons.py to scons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/help.py to help.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_path.py to tst_path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyframe.py to pyframe.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/introspection.py to introspection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/load_env.py to load_env.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_template.py to program_template.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/interface.py to interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/parser.py to parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/command_line.py to command_line.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/experimental.py to experimental.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cluster.py to cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/math_utils.py to math_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_version.py to tst_version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/env_config.py to env_config.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/wingide.py to wingide.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/result.py to result.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/binary_search.py to binary_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/str_utils.py to str_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/configure.py to configure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyplot.py to pyplot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/table_utils.py to table_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/callbacks.py to callbacks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/str_utils.py to str_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/version.py to version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/binary_search.py to binary_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_run.py to easy_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/timers.py to timers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/option_parser.py to option_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/citations.py to citations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/objgraph.py to objgraph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/progress.py to progress.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/complex_math.py to complex_math.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/introspection.py to introspection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/citations.py to citations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/configure.py to configure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/log.py to log.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/result.py to result.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/timers.py to timers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_template.py to program_template.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cli.py to cli.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/env_config.py to env_config.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/simplexml.py to simplexml.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cluster.py to cluster.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/progress.py to progress.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/containers.py to containers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/icons.py to icons.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/blast.py to blast.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/process_control.py to process_control.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/tables.py to tables.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/result.py to result.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/objgraph.py to objgraph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/smart_open.py to smart_open.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/windows.py to windows.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/listeditor.py to listeditor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/xtriage.py to xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/b_plot.py to b_plot.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/app.py to app.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/monitor.py to monitor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/errors.py to errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/layout.py to layout.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/errors.py to errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/b_plot.py to b_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon.py to polygon.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/info_panels.py to info_panels.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/layout.py to layout.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/browser.py to browser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/listeditor.py to listeditor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/icons.py to icons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/xtriage.py to xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/tables.py to tables.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/path.py to path.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/browser.py to browser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/info_panels.py to info_panels.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/windows.py to windows.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/version.py to version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nexus.py to nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Format.py to Format.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatESSNMX.py to FormatESSNMX.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/image.py to image.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Registry.py to Registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/load.py to load.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/filename.py to filename.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/xds.py to xds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/datablock.py to datablock.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-313.pyc
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-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/overload.py to overload.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache.py to filecache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/ext.py to ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/beam.py to beam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/profile.py to profile.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector.py to detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/crystal.py to crystal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan.py to scan.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/compare.py to compare.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/imageset.py to imageset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/flumpy.py to flumpy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-313.pyc
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-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-313.pyc
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-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/solver.py to solver.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/create.py to create.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/frame.py to frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/integration.py to integration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/display.py to display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/processing.py to processing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/controls.py to controls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/index.py to index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/constants.py to constants.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/scope.py to scope.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/preferences.py to preferences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/index.py to index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/flex.py to flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/device.py to device.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/time.py to time.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/process_control.py to process_control.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/blast.py to blast.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/misc.py to misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/fftpack.py to fftpack.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/simplex.py to simplex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/map.py to map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/set.py to set.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/vector.py to vector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minpack.py to minpack.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minimizers.py to minimizers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/svd.py to svd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/ext.py to ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/householder.py to householder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/smoothing.py to smoothing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/farey.py to farey.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/clustering.py to clustering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/ext.py to ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/distributions.py to distributions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/spe.py to spe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/superpose.py to superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/besselk.py to besselk.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/single.py to single.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/optional.py to optional.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/flex.py to flex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/shared.py to shared.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/functions.py to functions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/phil.py to phil.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pymol.py to pymol.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_tools.py to map_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/format.py to format.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraints.py to restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/errors.py to errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/builders.py to builders.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/model.py to model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/geometry.py to geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/citations.py to citations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/validation.py to validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/emma.py to emma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/map.py to map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/development.py to development.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/refine.py to refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/masks.py to masks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_direction.py to tst_direction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_disorder.py to tst_disorder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_rigid.py to tst_rigid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_same_group.py to tst_same_group.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_occupancies.py to tst_occupancies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/symmetry.py to symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/poscar.py to poscar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/mar.py to mar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/models.py to models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/edf.py to edf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/noir.py to noir.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/npy.py to npy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/edf.py to edf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/noir.py to noir.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/npy.py to npy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/mar.py to mar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/model.py to model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/common.py to common.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_plots.py to data_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/map.py to map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/ext.py to ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/merge.py to merge.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/errors.py to errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/writer.py to writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/symmetry.py to symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders.py to builders.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/records.py to records.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/download.py to download.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py to utils.cpython-313.pyc
+/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py:18: SyntaxWarning: invalid escape sequence '\{'
+/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/'
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/format.py to format.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/wildcard.py to wildcard.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xparm.py to xparm.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xparm.py to xparm.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/correction.py to correction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ranges.py to ranges.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/poscar.py to poscar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/emma.py to emma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/errors.py to errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/writer.py to writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/logfiles.py to logfiles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/wildcard.py to wildcard.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/option_parser.py to option_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pymol.py to pymol.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/file_reader.py to file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ranges.py to ranges.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/tst.py to tst.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/table_one.py to table_one.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders.py to builders.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/merge.py to merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/logfiles.py to logfiles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/map.py to map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/ext.py to ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phases.py to phases.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/models.py to models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/file_reader.py to file_reader.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/option_parser.py to option_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/download.py to download.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py to utils.cpython-313.pyc
-/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py:18: SyntaxWarning: invalid escape sequence '\{'
-/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/'
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/records.py to records.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/common.py to common.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/phil.py to phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/model.py to model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_manager.py to map_manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/model.py to model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/validation.py to validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/errors.py to errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/citations.py to citations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/builders.py to builders.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/table_one.py to table_one.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_tools.py to map_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/device.py to device.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/frames.py to frames.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/run.py to run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/tst.py to tst.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/multipolar.py to multipolar.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/dev.py to dev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/display.py to display.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_examples.py to run_examples.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/statistics.py to statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/run.py to run.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/imageset.py to imageset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/overload.py to overload.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/version.py to version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/datablock.py to datablock.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/load.py to load.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/xds.py to xds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/filename.py to filename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/ext.py to ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/crystal.py to crystal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/profile.py to profile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector.py to detector.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/compare.py to compare.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/beam.py to beam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan.py to scan.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Format.py to Format.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nexus.py to nexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/image.py to image.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatESSNMX.py to FormatESSNMX.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Registry.py to Registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache.py to filecache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/flumpy.py to flumpy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache.py to apache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/exception.py to exception.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/flex.py to flex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/arrays.py to arrays.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_1.py to tst_add_hydrogen_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_4.py to tst_add_hydrogen_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/find.py to find.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mask.py to mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/polder.py to polder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fetch.py to fetch.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/clashes.py to clashes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/proq2.py to proq2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/output.py to output.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/msa.py to msa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/environment.py to environment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/identify.py to identify.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/halides.py to halides.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/build.py to build.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/clash.py to clash.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/topology.py to topology.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/asa.py to asa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mask.py to mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/angle.py to angle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/polder.py to polder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/super.py to super.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/f000.py to f000.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls.py to tls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maps.py to maps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/geostd_utils.py to geostd_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/server.py to server.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tools.py to tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip.py to xmanip.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suites.py to suites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absences.py to absences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/phi_psi_2_data.py to phi_psi_2_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/waters.py to waters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/lattice.py to lattice.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/model.py to model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/statistics.py to statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/grow_density.py to grow_density.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain_cif.py to tst_minimize_chain_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ribbons.py to tst_ribbons.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_arginine_geometry.py to tst_arginine_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_lrv.py to tst_lrv.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/kick.py to kick.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fem.py to fem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/polder.py to polder.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/refinement.py to refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/superpose.py to superpose.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights.py to weights.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/orca.py to orca.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/data.py to data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/targets.py to targets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/group.py to group.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/map_tools.py to map_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst.py to tst.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/fonts.py to fonts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/images.py to images.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/glu.py to glu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/quadrics.py to quadrics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/util.py to util.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl.py to gl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/watch_file.py to watch_file.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/henke.py to henke.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/formula.py to formula.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/formula.py to formula.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/henke.py to henke.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/version.py to version.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adptbx.py to adptbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/statistics.py to statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/display.py to display.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/version.py to version.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mem.py to mem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/box.py to box.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mask.py to mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/emma.py to emma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/replay.py to replay.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/shelx.py to shelx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/minimization.py to minimization.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/ext.py to ext.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/minimization.py to minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/ext.py to ext.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure.py to structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/math_module.py to math_module.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/translation_search.py to translation_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/math_module.py to math_module.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/flex.py to flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/dev.py to dev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/github.py to github.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/location_part.py to location_part.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/location_part.py to location_part.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-313.pyc
 byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/github.py to github.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adptbx.py to adptbx.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache.py to apache.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/flex.py to flex.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/exception.py to exception.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_disorder.py to tst_disorder.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_direction.py to tst_direction.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_rigid.py to tst_rigid.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_same_group.py to tst_same_group.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_occupancies.py to tst_occupancies.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/map.py to map.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/utils.py to utils.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/masks.py to masks.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/refine.py to refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/run_tests.py to run_tests.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/development.py to development.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/__init__.py to __init__.cpython-313.pyc
-byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/emma.py to emma.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/replay.py to replay.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/shelx.py to shelx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/multipolar.py to multipolar.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mem.py to mem.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mask.py to mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/box.py to box.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_examples.py to run_examples.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/read.py to read.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/equivalence.py to equivalence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tokenization.py to tokenization.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/read.py to read.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/cout.py to cout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/split.py to split.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/cout.py to cout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout.py to tst_cout.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_read.py to tst_read.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_ext.py to tst_ext.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/intrinsics.py to intrinsics.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/utils.py to utils.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/python.py to python.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-313.pyc
+byte-compiling /build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-313.pyc
 running install_egg_info
 running egg_info
 writing src/dxtbx.egg-info/PKG-INFO
@@ -43875,19 +43911,19 @@
 {'_dispatcher_include_at_start': [],
  '_dispatcher_include_before_command': [],
  '_dispatcher_precall_commands': None,
- '_dispatcher_registry': {relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.depends_on"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/depends_on.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.saturation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/saturation.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.show_registry"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/show_registry.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.image_average"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/image_average.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cxi.image_average"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/image_average.py"),
+ '_dispatcher_registry': {relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.overload"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/overload.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.plot_detector_models"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/plot_detector_models.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.show_mask_info"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/show_mask_info.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.display_parallax_correction"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/display_parallax_correction.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.print_matching_images"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/print_matching_images.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.display_parallax_correction"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/display_parallax_correction.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.any2nexus"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/any2nexus.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.saturation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/saturation.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.detector_superpose"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/detector_superpose.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.show_registry"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/show_registry.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.dlsnxs2cbf"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/dlsnxs2cbf.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.show_matching_formats"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/show_matching_formats.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.plot_detector_models"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/plot_detector_models.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.image2pickle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/image2pickle.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cxi.image2pickle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/image2pickle.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.detector_superpose"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/detector_superpose.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/boost.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/omptbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cma_es.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"),
@@ -43945,451 +43981,451 @@
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/rstbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_dist_paths.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/serialtbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_dist_paths.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/wxtbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_dist_paths.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/mmtbx.mon_lib_cif_triage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../mmtbx/command_line/mon_lib_cif_triage.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/phenix.chiral_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../mmtbx/command_line/chiral_validation.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/molprobity.chiral_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../mmtbx/command_line/chiral_validation.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/mmtbx.probe2"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../mmtbx/command_line/probe2.py"),
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-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/mmtbx.mp_geo"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../mmtbx/command_line/mp_geo.py"),
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+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_number_of_processors"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_number_of_processors.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.scons"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/scons.py"),
                           relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_module_dependencies"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_module_dependencies.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.line_count"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/line_count.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.list_modules"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/list_modules.py"),
-                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_include_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_include_paths.py")},
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.raise_exception_for_testing"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/raise_exception_for_testing.py"),
+                          relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.valgrind"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/valgrind.sh")},
  'bin_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin"),
  'boost_version': 108300,
- 'build_options': <libtbx.env_config.build_options object at 0x7f9d45a9cc20>,
+ 'build_options': <libtbx.env_config.build_options object at 0x7f93f27e0c20>,
  'build_path': absolute_path("/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13"),
  'command_line_redirections': {},
  'command_version_suffix': None,
@@ -44426,30 +44462,30 @@
  'lib_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="lib"),
  'missing_for_build': set(),
  'missing_for_use': set(),
- 'missing_optional': {'king', 'docutils', 'probe', 'cbflib', 'reduce'},
- 'module_dict': {'annlib': <libtbx.env_config.module object at 0x7f9d45b445a0>,
-                 'boost': <libtbx.env_config.module object at 0x7f9d45af2210>,
-                 'cbflib': <libtbx.env_config.module object at 0x7f9d45d65150>,
-                 'ccp4io': <libtbx.env_config.module object at 0x7f9d45caa150>,
-                 'cctbx': <libtbx.env_config.module object at 0x7f9d45d0bb60>,
-                 'chiltbx': <libtbx.env_config.module object at 0x7f9d45d0b7a0>,
-                 'cma_es': <libtbx.env_config.module object at 0x7f9d45ac0fc0>,
-                 'crys3d': <libtbx.env_config.module object at 0x7f9d45ace970>,
-                 'dxtbx': <libtbx.env_config.module object at 0x7f9d45aca2d0>,
-                 'fable': <libtbx.env_config.module object at 0x7f9d45c67d10>,
-                 'gltbx': <libtbx.env_config.module object at 0x7f9d45abcd60>,
-                 'iotbx': <libtbx.env_config.module object at 0x7f9d45ac9fd0>,
-                 'libtbx': <libtbx.env_config.module object at 0x7f9d45a9cd70>,
-                 'mmtbx': <libtbx.env_config.module object at 0x7f9d45abccb0>,
-                 'omptbx': <libtbx.env_config.module object at 0x7f9d45ac10f0>,
-                 'rstbx': <libtbx.env_config.module object at 0x7f9d45abcb50>,
-                 'scitbx': <libtbx.env_config.module object at 0x7f9d45c36470>,
-                 'serialtbx': <libtbx.env_config.module object at 0x7f9d45abcaa0>,
-                 'smtbx': <libtbx.env_config.module object at 0x7f9d45c77ba0>,
-                 'spotfinder': <libtbx.env_config.module object at 0x7f9d45abcc00>,
-                 'tbxx': <libtbx.env_config.module object at 0x7f9d45af20d0>,
-                 'ucif': <libtbx.env_config.module object at 0x7f9d45aceb30>,
-                 'wxtbx': <libtbx.env_config.module object at 0x7f9d45abc9f0>},
+ 'missing_optional': {'reduce', 'docutils', 'probe', 'cbflib', 'king'},
+ 'module_dict': {'annlib': <libtbx.env_config.module object at 0x7f93f28885a0>,
+                 'boost': <libtbx.env_config.module object at 0x7f93f2836210>,
+                 'cbflib': <libtbx.env_config.module object at 0x7f93f2aa9150>,
+                 'ccp4io': <libtbx.env_config.module object at 0x7f93f29ee150>,
+                 'cctbx': <libtbx.env_config.module object at 0x7f93f2a4fb60>,
+                 'chiltbx': <libtbx.env_config.module object at 0x7f93f2a4f7a0>,
+                 'cma_es': <libtbx.env_config.module object at 0x7f93f2804fc0>,
+                 'crys3d': <libtbx.env_config.module object at 0x7f93f2812970>,
+                 'dxtbx': <libtbx.env_config.module object at 0x7f93f280e2d0>,
+                 'fable': <libtbx.env_config.module object at 0x7f93f29abd10>,
+                 'gltbx': <libtbx.env_config.module object at 0x7f93f2800d60>,
+                 'iotbx': <libtbx.env_config.module object at 0x7f93f280dfd0>,
+                 'libtbx': <libtbx.env_config.module object at 0x7f93f27e0d70>,
+                 'mmtbx': <libtbx.env_config.module object at 0x7f93f2800cb0>,
+                 'omptbx': <libtbx.env_config.module object at 0x7f93f28050f0>,
+                 'rstbx': <libtbx.env_config.module object at 0x7f93f2800b50>,
+                 'scitbx': <libtbx.env_config.module object at 0x7f93f297a470>,
+                 'serialtbx': <libtbx.env_config.module object at 0x7f93f2800aa0>,
+                 'smtbx': <libtbx.env_config.module object at 0x7f93f29bbba0>,
+                 'spotfinder': <libtbx.env_config.module object at 0x7f93f2800c00>,
+                 'tbxx': <libtbx.env_config.module object at 0x7f93f28360d0>,
+                 'ucif': <libtbx.env_config.module object at 0x7f93f2812b30>,
+                 'wxtbx': <libtbx.env_config.module object at 0x7f93f28009f0>},
  'module_dist_paths': {'annlib': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../annlib"),
                        'annlib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../annlib_adaptbx"),
                        'boost': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../boost"),
@@ -44476,29 +44512,29 @@
                        'tbxx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../tbxx"),
                        'ucif': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../ucif"),
                        'wxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../wxtbx")},
- 'module_list': [<libtbx.env_config.module object at 0x7f9d45a9cd70>,
-                 <libtbx.env_config.module object at 0x7f9d45af20d0>,
-                 <libtbx.env_config.module object at 0x7f9d45af2210>,
-                 <libtbx.env_config.module object at 0x7f9d45ac10f0>,
-                 <libtbx.env_config.module object at 0x7f9d45ac0fc0>,
-                 <libtbx.env_config.module object at 0x7f9d45c67d10>,
-                 <libtbx.env_config.module object at 0x7f9d45c36470>,
-                 <libtbx.env_config.module object at 0x7f9d45b445a0>,
-                 <libtbx.env_config.module object at 0x7f9d45d65150>,
-                 <libtbx.env_config.module object at 0x7f9d45caa150>,
-                 <libtbx.env_config.module object at 0x7f9d45d0b7a0>,
-                 <libtbx.env_config.module object at 0x7f9d45d0bb60>,
-                 <libtbx.env_config.module object at 0x7f9d45ace970>,
-                 <libtbx.env_config.module object at 0x7f9d45aceb30>,
-                 <libtbx.env_config.module object at 0x7f9d45c77ba0>,
-                 <libtbx.env_config.module object at 0x7f9d45ac9fd0>,
-                 <libtbx.env_config.module object at 0x7f9d45aca2d0>,
-                 <libtbx.env_config.module object at 0x7f9d45abcd60>,
-                 <libtbx.env_config.module object at 0x7f9d45abccb0>,
-                 <libtbx.env_config.module object at 0x7f9d45abcc00>,
-                 <libtbx.env_config.module object at 0x7f9d45abcb50>,
-                 <libtbx.env_config.module object at 0x7f9d45abcaa0>,
-                 <libtbx.env_config.module object at 0x7f9d45abc9f0>],
+ 'module_list': [<libtbx.env_config.module object at 0x7f93f27e0d70>,
+                 <libtbx.env_config.module object at 0x7f93f28360d0>,
+                 <libtbx.env_config.module object at 0x7f93f2836210>,
+                 <libtbx.env_config.module object at 0x7f93f28050f0>,
+                 <libtbx.env_config.module object at 0x7f93f2804fc0>,
+                 <libtbx.env_config.module object at 0x7f93f29abd10>,
+                 <libtbx.env_config.module object at 0x7f93f297a470>,
+                 <libtbx.env_config.module object at 0x7f93f28885a0>,
+                 <libtbx.env_config.module object at 0x7f93f2aa9150>,
+                 <libtbx.env_config.module object at 0x7f93f29ee150>,
+                 <libtbx.env_config.module object at 0x7f93f2a4f7a0>,
+                 <libtbx.env_config.module object at 0x7f93f2a4fb60>,
+                 <libtbx.env_config.module object at 0x7f93f2812970>,
+                 <libtbx.env_config.module object at 0x7f93f2812b30>,
+                 <libtbx.env_config.module object at 0x7f93f29bbba0>,
+                 <libtbx.env_config.module object at 0x7f93f280dfd0>,
+                 <libtbx.env_config.module object at 0x7f93f280e2d0>,
+                 <libtbx.env_config.module object at 0x7f93f2800d60>,
+                 <libtbx.env_config.module object at 0x7f93f2800cb0>,
+                 <libtbx.env_config.module object at 0x7f93f2800c00>,
+                 <libtbx.env_config.module object at 0x7f93f2800b50>,
+                 <libtbx.env_config.module object at 0x7f93f2800aa0>,
+                 <libtbx.env_config.module object at 0x7f93f28009f0>],
  'no_bin_python': False,
  'path_utility': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/path_utility.py"),
  'python_exe': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"),
@@ -44518,7 +44554,9 @@
 {'_dispatcher_include_at_start': [],
  '_dispatcher_include_before_command': [],
  '_dispatcher_precall_commands': None,
- '_dispatcher_registry': {relocatable_path(anchor="/usr", relocatable="bin/ccp4io.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
+ '_dispatcher_registry': {relocatable_path(anchor="/usr", relocatable="bin/annlib.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
+                          relocatable_path(anchor="/usr", relocatable="bin/cbflib.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
+                          relocatable_path(anchor="/usr", relocatable="bin/ccp4io.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
                           relocatable_path(anchor="/usr", relocatable="bin/cctbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
                           relocatable_path(anchor="/usr", relocatable="bin/crys3d.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
                           relocatable_path(anchor="/usr", relocatable="bin/smtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
@@ -44568,471 +44606,469 @@
                           relocatable_path(anchor="/usr", relocatable="bin/rstbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/serialtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/wxtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.maximum_entropy_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/maximum_entropy_map.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.matthews"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/matthews.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/phenix.undowser2_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/undowser2.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.undowser2_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/undowser2.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/molprobity.undowser2_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/undowser2.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/phenix.rna_validate"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/molprobity.rna_validate"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.model_idealization"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/model_idealization.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.fab_elbow_angle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fab_elbow_angle.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.perigee"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/perigee.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.dynamics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/dynamics.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.aev"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/development.aev.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.emringer_score"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/emringer_score.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.arginine_geometry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/arginine_geometry.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.tls"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/tls.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.select_best_starting_model"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/select_best_starting_model.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.fmodel"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fmodel.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.mask"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/mask.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.prepare_pdb_deposition"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.electrons"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/electrons.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/mmtbx.validation_summary"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/validation_summary.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/phenix.sisa"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/sisa.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/phenix.grow_density"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/grow_density.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/phenix.model_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/model_map.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.rebuild_rotarama_cache"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.probe2"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/probe2.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.plan_sad_experiment"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/plan_sad_experiment.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/phenix.find_tls_groups"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/find_tls_groups.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.water_b_factors"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/water_b_factors.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.quantum_interface"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/quantum_interface.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.validate_ligands"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/validate_ligands.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.superpose"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/superpose.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/mmtbx.find_residue_in_pdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/find_residue_in_pdb.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/phenix.fab_elbow_angle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fab_elbow_angle.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/molprobity.probescore_ligand"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/probescore_ligand.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/phenix.r_factor_statistics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/r_factor_statistics.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/phenix.rank_scale_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rank_scale_map.py"),
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-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_untested"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_untested.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.unpack_in_sources"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/unpack_in_sources.csh"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_but_no_repr"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_but_no_repr.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_in_repositories"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_in_repositories.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_unused_imports_crude"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_unused_imports_crude.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.run_pickled_function"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/run_pickled_function.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.list_modules"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/list_modules.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.import_all_python"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/import_all_python.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.py_compile_all"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/py_compile_all.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.easy_qsub"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/easy_qsub.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/libtbx.start_process"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/start_process.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_unzipsfx"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_unzipsfx.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.install"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/install.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.remove_tree"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/remove_tree.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_stdin_ends_with"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_stdin_ends_with.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.list_files"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/list_files.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_pythonpath"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_pythonpath.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.prime_factors_of"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/prime_factors_of.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_full_command_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_full_command_path.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.clear_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/clear_paths.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.phil"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/phil.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_repository_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_repository_paths.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_not_show_diff"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_not_show_diff.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.extract_code_from_txt"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/extract_code_from_txt.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.bash"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bash.sh"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_python_dependencies"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_python_dependencies.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.path_utility"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/path_utility.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_module_dependencies"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_module_dependencies.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.line_count"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/line_count.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.list_modules"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/list_modules.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_include_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_include_paths.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.configure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/configure.sh"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_numeric_version"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_numeric_version.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.tcsh"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/tcsh.sh"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_tests"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_tests.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_files"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_files.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/libtbx.dtrace"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/dtrace.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/sphinx.build"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sphinx_build.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_installer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_installer.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_host_and_user"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_host_and_user.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.pdflatex"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/pdflatex.sh"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_env"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_env.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.import_all_python"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/import_all_python.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_commands"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_commands.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_but_no_repr"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_but_no_repr.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.parallel_simple"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/parallel_simple.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_python_sys_executable"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_python_sys_executable.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_selfx"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_selfx.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_numpy_version"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_numpy_version.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.any2unix"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/any2unix.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_pdb_mmcif_problems"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_untested"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_untested.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.path_utility"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/path_utility.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.sge_qstat_counts"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sge_qstat_counts.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.refresh"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/refresh.sh"),
                           relocatable_path(anchor="/usr", relocatable="bin/libtbx.sge_available_slots"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sge_available_slots.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_windows_exe"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_windows_exe.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.resource_monitor_plot"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/resource_monitor_plot.py"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.clean_clutter"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/clean_clutter.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_all_on_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_all_on_path.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.check_libcpp"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/check_libcpp.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.chunk"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/chunk.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.make_dist"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/make_dist.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.configure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/configure.sh"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_unused_imports_crude"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_unused_imports_crude.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.add_from_future_import_division"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/add_from_future_import_division.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.install"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/install.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.remote_processing"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/remote_processing.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_clutter"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_clutter.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_repository_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_repository_paths.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_number_of_processors"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_number_of_processors.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.scons"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/scons.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_module_dependencies"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_module_dependencies.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/libtbx.raise_exception_for_testing"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/raise_exception_for_testing.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.valgrind"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/valgrind.sh"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.prime_factors_of"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/prime_factors_of.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.start_binary_bundle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/start_binary_bundle.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_mac_app"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_mac_app.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.resource_monitor_plot"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/resource_monitor_plot.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.bootstrap"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bootstrap.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_env"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_env.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_in_repositories"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_in_repositories.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/sphinx.build"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sphinx_build.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.import_all_ext"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/import_all_ext.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_environ_usage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_environ_usage.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.printenv"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/printenv.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.bash"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bash.sh"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_not_show_diff"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_not_show_diff.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_build_options"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_options.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.extract_code_from_txt"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/extract_code_from_txt.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_variable_names"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_variable_names.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.run_tests_parallel"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/run_tests_parallel.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_unused_imports"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_unused_imports.py"),
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.bundle_as_exe"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bundle_as_exe.py"),
                           relocatable_path(anchor="/usr", relocatable="bin/libtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
-                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.csh"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/csh.sh")},
+                          relocatable_path(anchor="/usr", relocatable="bin/libtbx.phil"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/phil.py")},
  'bin_path': relocatable_path(anchor="/usr", relocatable="bin"),
  'boost_version': 108300,
- 'build_options': <libtbx.env_config.build_options object at 0x7f9d45a9cc20>,
+ 'build_options': <libtbx.env_config.build_options object at 0x7f93f27e0c20>,
  'build_path': absolute_path("/usr/lib/cctbx/python3.13"),
  'command_line_redirections': {},
  'command_version_suffix': None,
@@ -45069,30 +45105,30 @@
  'lib_path': relocatable_path(anchor="/usr", relocatable="lib"),
  'missing_for_build': set(),
  'missing_for_use': set(),
- 'missing_optional': {'king', 'docutils', 'probe', 'cbflib', 'reduce'},
- 'module_dict': {'annlib': <libtbx.env_config.module object at 0x7f9d45b445a0>,
-                 'boost': <libtbx.env_config.module object at 0x7f9d45af2210>,
-                 'cbflib': <libtbx.env_config.module object at 0x7f9d45d65150>,
-                 'ccp4io': <libtbx.env_config.module object at 0x7f9d45caa150>,
-                 'cctbx': <libtbx.env_config.module object at 0x7f9d45d0bb60>,
-                 'chiltbx': <libtbx.env_config.module object at 0x7f9d45d0b7a0>,
-                 'cma_es': <libtbx.env_config.module object at 0x7f9d45ac0fc0>,
-                 'crys3d': <libtbx.env_config.module object at 0x7f9d45ace970>,
-                 'dxtbx': <libtbx.env_config.module object at 0x7f9d45aca2d0>,
-                 'fable': <libtbx.env_config.module object at 0x7f9d45c67d10>,
-                 'gltbx': <libtbx.env_config.module object at 0x7f9d45abcd60>,
-                 'iotbx': <libtbx.env_config.module object at 0x7f9d45ac9fd0>,
-                 'libtbx': <libtbx.env_config.module object at 0x7f9d45a9cd70>,
-                 'mmtbx': <libtbx.env_config.module object at 0x7f9d45abccb0>,
-                 'omptbx': <libtbx.env_config.module object at 0x7f9d45ac10f0>,
-                 'rstbx': <libtbx.env_config.module object at 0x7f9d45abcb50>,
-                 'scitbx': <libtbx.env_config.module object at 0x7f9d45c36470>,
-                 'serialtbx': <libtbx.env_config.module object at 0x7f9d45abcaa0>,
-                 'smtbx': <libtbx.env_config.module object at 0x7f9d45c77ba0>,
-                 'spotfinder': <libtbx.env_config.module object at 0x7f9d45abcc00>,
-                 'tbxx': <libtbx.env_config.module object at 0x7f9d45af20d0>,
-                 'ucif': <libtbx.env_config.module object at 0x7f9d45aceb30>,
-                 'wxtbx': <libtbx.env_config.module object at 0x7f9d45abc9f0>},
+ 'missing_optional': {'reduce', 'docutils', 'probe', 'cbflib', 'king'},
+ 'module_dict': {'annlib': <libtbx.env_config.module object at 0x7f93f28885a0>,
+                 'boost': <libtbx.env_config.module object at 0x7f93f2836210>,
+                 'cbflib': <libtbx.env_config.module object at 0x7f93f2aa9150>,
+                 'ccp4io': <libtbx.env_config.module object at 0x7f93f29ee150>,
+                 'cctbx': <libtbx.env_config.module object at 0x7f93f2a4fb60>,
+                 'chiltbx': <libtbx.env_config.module object at 0x7f93f2a4f7a0>,
+                 'cma_es': <libtbx.env_config.module object at 0x7f93f2804fc0>,
+                 'crys3d': <libtbx.env_config.module object at 0x7f93f2812970>,
+                 'dxtbx': <libtbx.env_config.module object at 0x7f93f280e2d0>,
+                 'fable': <libtbx.env_config.module object at 0x7f93f29abd10>,
+                 'gltbx': <libtbx.env_config.module object at 0x7f93f2800d60>,
+                 'iotbx': <libtbx.env_config.module object at 0x7f93f280dfd0>,
+                 'libtbx': <libtbx.env_config.module object at 0x7f93f27e0d70>,
+                 'mmtbx': <libtbx.env_config.module object at 0x7f93f2800cb0>,
+                 'omptbx': <libtbx.env_config.module object at 0x7f93f28050f0>,
+                 'rstbx': <libtbx.env_config.module object at 0x7f93f2800b50>,
+                 'scitbx': <libtbx.env_config.module object at 0x7f93f297a470>,
+                 'serialtbx': <libtbx.env_config.module object at 0x7f93f2800aa0>,
+                 'smtbx': <libtbx.env_config.module object at 0x7f93f29bbba0>,
+                 'spotfinder': <libtbx.env_config.module object at 0x7f93f2800c00>,
+                 'tbxx': <libtbx.env_config.module object at 0x7f93f28360d0>,
+                 'ucif': <libtbx.env_config.module object at 0x7f93f2812b30>,
+                 'wxtbx': <libtbx.env_config.module object at 0x7f93f28009f0>},
  'module_dist_paths': {'annlib': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib"),
                        'annlib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib_adaptbx"),
                        'boost': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost"),
@@ -45119,29 +45155,29 @@
                        'tbxx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/tbxx"),
                        'ucif': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ucif"),
                        'wxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx")},
- 'module_list': [<libtbx.env_config.module object at 0x7f9d45a9cd70>,
-                 <libtbx.env_config.module object at 0x7f9d45af20d0>,
-                 <libtbx.env_config.module object at 0x7f9d45af2210>,
-                 <libtbx.env_config.module object at 0x7f9d45ac10f0>,
-                 <libtbx.env_config.module object at 0x7f9d45ac0fc0>,
-                 <libtbx.env_config.module object at 0x7f9d45c67d10>,
-                 <libtbx.env_config.module object at 0x7f9d45c36470>,
-                 <libtbx.env_config.module object at 0x7f9d45b445a0>,
-                 <libtbx.env_config.module object at 0x7f9d45d65150>,
-                 <libtbx.env_config.module object at 0x7f9d45caa150>,
-                 <libtbx.env_config.module object at 0x7f9d45d0b7a0>,
-                 <libtbx.env_config.module object at 0x7f9d45d0bb60>,
-                 <libtbx.env_config.module object at 0x7f9d45ace970>,
-                 <libtbx.env_config.module object at 0x7f9d45aceb30>,
-                 <libtbx.env_config.module object at 0x7f9d45c77ba0>,
-                 <libtbx.env_config.module object at 0x7f9d45ac9fd0>,
-                 <libtbx.env_config.module object at 0x7f9d45aca2d0>,
-                 <libtbx.env_config.module object at 0x7f9d45abcd60>,
-                 <libtbx.env_config.module object at 0x7f9d45abccb0>,
-                 <libtbx.env_config.module object at 0x7f9d45abcc00>,
-                 <libtbx.env_config.module object at 0x7f9d45abcb50>,
-                 <libtbx.env_config.module object at 0x7f9d45abcaa0>,
-                 <libtbx.env_config.module object at 0x7f9d45abc9f0>],
+ 'module_list': [<libtbx.env_config.module object at 0x7f93f27e0d70>,
+                 <libtbx.env_config.module object at 0x7f93f28360d0>,
+                 <libtbx.env_config.module object at 0x7f93f2836210>,
+                 <libtbx.env_config.module object at 0x7f93f28050f0>,
+                 <libtbx.env_config.module object at 0x7f93f2804fc0>,
+                 <libtbx.env_config.module object at 0x7f93f29abd10>,
+                 <libtbx.env_config.module object at 0x7f93f297a470>,
+                 <libtbx.env_config.module object at 0x7f93f28885a0>,
+                 <libtbx.env_config.module object at 0x7f93f2aa9150>,
+                 <libtbx.env_config.module object at 0x7f93f29ee150>,
+                 <libtbx.env_config.module object at 0x7f93f2a4f7a0>,
+                 <libtbx.env_config.module object at 0x7f93f2a4fb60>,
+                 <libtbx.env_config.module object at 0x7f93f2812970>,
+                 <libtbx.env_config.module object at 0x7f93f2812b30>,
+                 <libtbx.env_config.module object at 0x7f93f29bbba0>,
+                 <libtbx.env_config.module object at 0x7f93f280dfd0>,
+                 <libtbx.env_config.module object at 0x7f93f280e2d0>,
+                 <libtbx.env_config.module object at 0x7f93f2800d60>,
+                 <libtbx.env_config.module object at 0x7f93f2800cb0>,
+                 <libtbx.env_config.module object at 0x7f93f2800c00>,
+                 <libtbx.env_config.module object at 0x7f93f2800b50>,
+                 <libtbx.env_config.module object at 0x7f93f2800aa0>,
+                 <libtbx.env_config.module object at 0x7f93f28009f0>],
  'no_bin_python': True,
  'path_utility': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/path_utility.py"),
  'python_exe': relocatable_path(anchor="/usr", relocatable="bin/python3.13"),
@@ -45196,7 +45232,7 @@
 smtbx/refinement/constraints/tests/tst_reparametrisation
 smtbx/refinement/constraints/tests/tst_special_position
 
-sent 16,074,604 bytes  received 568 bytes  32,150,344.00 bytes/sec
+sent 16,074,636 bytes  received 568 bytes  32,150,408.00 bytes/sec
 total size is 16,063,032  speedup is 1.00
 building file list ... done
 ./
@@ -45258,13 +45294,13 @@
 libspotfinder.so.0 -> libspotfinder.so.0.0.1
 libspotfinder.so.0.0.1
 
-sent 56,810,976 bytes  received 494 bytes  113,622,940.00 bytes/sec
+sent 56,810,998 bytes  received 494 bytes  113,622,984.00 bytes/sec
 total size is 56,794,226  speedup is 1.00
 building file list ... done
 annlib_adaptbx/
 annlib_adaptbx/ann_adaptor.h
 
-sent 2,238 bytes  received 38 bytes  1,517.33 bytes/sec
+sent 2,238 bytes  received 38 bytes  4,552.00 bytes/sec
 total size is 2,068  speedup is 0.91
 building file list ... done
 boost_adaptbx/
@@ -45290,7 +45326,7 @@
 boost_adaptbx/tests/
 boost_adaptbx/tests/tst_optional_copy.h
 
-sent 73,888 bytes  received 386 bytes  148,548.00 bytes/sec
+sent 73,891 bytes  received 386 bytes  148,554.00 bytes/sec
 total size is 72,301  speedup is 0.97
 building file list ... done
 cbflib_adaptbx/
@@ -45304,7 +45340,7 @@
 cbflib_adaptbx/detectors/boost_python/cbf_binary_adaptor.h
 cbflib_adaptbx/detectors/boost_python/general_cbf_write.h
 
-sent 22,301 bytes  received 158 bytes  44,918.00 bytes/sec
+sent 22,306 bytes  received 158 bytes  44,928.00 bytes/sec
 total size is 21,627  speedup is 0.96
 building file list ... done
 ccp4io_adaptbx/
@@ -45326,7 +45362,7 @@
 ccp4io_adaptbx/dev/
 ccp4io_adaptbx/dev/fftlib.hpp
 
-sent 87,962 bytes  received 326 bytes  176,576.00 bytes/sec
+sent 87,978 bytes  received 326 bytes  176,608.00 bytes/sec
 total size is 86,683  speedup is 0.98
 building file list ... done
 cctbx/
@@ -45586,7 +45622,7 @@
 cctbx/xray/targets/mli.h
 cctbx/xray/targets/shelxl_wght_ls.hpp
 
-sent 1,904,959 bytes  received 4,420 bytes  3,818,758.00 bytes/sec
+sent 1,904,977 bytes  received 4,420 bytes  3,818,794.00 bytes/sec
 total size is 1,887,892  speedup is 0.99
 building file list ... done
 cma_es/
@@ -45598,7 +45634,7 @@
 total size is 6,671  speedup is 0.96
 building file list ... done
 
-sent 196 bytes  received 12 bytes  416.00 bytes/sec
+sent 205 bytes  received 12 bytes  434.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 dxtbx/
@@ -45640,7 +45676,7 @@
 dxtbx/model/boost_python/pickle_suite.h
 dxtbx/model/boost_python/to_from_dict.h
 
-sent 393,425 bytes  received 610 bytes  788,070.00 bytes/sec
+sent 393,449 bytes  received 610 bytes  788,118.00 bytes/sec
 total size is 390,975  speedup is 0.99
 building file list ... done
 ./
@@ -45694,7 +45730,7 @@
 fem/utils/string_to_double_fmt.hpp
 fem/utils/token.hpp
 
-sent 203,995 bytes  received 918 bytes  409,826.00 bytes/sec
+sent 204,018 bytes  received 918 bytes  409,872.00 bytes/sec
 total size is 200,764  speedup is 0.98
 building file list ... done
 gltbx/
@@ -45708,7 +45744,7 @@
 gltbx/special_wrapper_support.h
 gltbx/util.h
 
-sent 598,805 bytes  received 190 bytes  1,197,990.00 bytes/sec
+sent 598,799 bytes  received 190 bytes  1,197,978.00 bytes/sec
 total size is 597,954  speedup is 1.00
 building file list ... done
 iotbx/
@@ -45751,11 +45787,11 @@
 iotbx/xplor/map_reader.h
 iotbx/xplor/map_writer.h
 
-sent 270,387 bytes  received 629 bytes  542,032.00 bytes/sec
+sent 270,373 bytes  received 629 bytes  542,004.00 bytes/sec
 total size is 267,526  speedup is 0.99
 building file list ... done
 
-sent 461 bytes  received 12 bytes  946.00 bytes/sec
+sent 489 bytes  received 12 bytes  1,002.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 mmtbx/
@@ -45848,7 +45884,7 @@
 mmtbx/validation/ramachandran/rama8000_tables.h
 mmtbx/validation/ramachandran/rama_eval.h
 
-sent 2,052,661 bytes  received 1,291 bytes  4,107,904.00 bytes/sec
+sent 2,052,699 bytes  received 1,291 bytes  4,107,980.00 bytes/sec
 total size is 2,046,334  speedup is 1.00
 building file list ... done
 omptbx/
@@ -45892,7 +45928,7 @@
 rstbx/symmetry/constraints/
 rstbx/symmetry/constraints/a_g_conversion.h
 
-sent 111,361 bytes  received 400 bytes  223,522.00 bytes/sec
+sent 111,363 bytes  received 400 bytes  223,526.00 bytes/sec
 total size is 109,476  speedup is 0.98
 building file list ... done
 scitbx/
@@ -46215,11 +46251,11 @@
 scitbx/wigner/
 scitbx/wigner/wigner3j.h
 
-sent 1,906,311 bytes  received 5,521 bytes  3,823,664.00 bytes/sec
+sent 1,906,401 bytes  received 5,521 bytes  3,823,844.00 bytes/sec
 total size is 1,886,121  speedup is 0.99
 building file list ... done
 
-sent 152 bytes  received 12 bytes  328.00 bytes/sec
+sent 160 bytes  received 12 bytes  344.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 smtbx/
@@ -46255,7 +46291,7 @@
 smtbx/structure_factors/direct/standard_xray.h
 smtbx/structure_factors/direct/table_based.h
 
-sent 182,157 bytes  received 512 bytes  365,338.00 bytes/sec
+sent 182,165 bytes  received 512 bytes  365,354.00 bytes/sec
 total size is 179,686  speedup is 0.98
 building file list ... done
 spotfinder/
@@ -46274,7 +46310,7 @@
 spotfinder/dxtbx_toolbox/distl.h
 spotfinder/dxtbx_toolbox/libdistl.h
 
-sent 42,949 bytes  received 221 bytes  86,340.00 bytes/sec
+sent 42,959 bytes  received 221 bytes  86,360.00 bytes/sec
 total size is 41,966  speedup is 0.97
 building file list ... done
 tbxx/
@@ -46289,12 +46325,13 @@
 total size is 11,532  speedup is 0.95
 building file list ... done
 
-sent 157 bytes  received 12 bytes  338.00 bytes/sec
+sent 156 bytes  received 12 bytes  336.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 ./
 boost_adaptbx/
 boost_adaptbx/type_id_eq.h
+cctbx/
 cctbx/boost_python/
 cctbx/boost_python/flex_fwd.h
 scitbx/
@@ -46324,27 +46361,28 @@
 scitbx/array_family/detail/
 scitbx/array_family/detail/operator_functors.h
 scitbx/array_family/detail/std_imports.h
+smtbx/
 smtbx/boost_python/
 smtbx/boost_python/flex_fwd.h
 
-sent 347,301 bytes  received 534 bytes  695,670.00 bytes/sec
+sent 347,324 bytes  received 540 bytes  695,728.00 bytes/sec
 total size is 345,070  speedup is 0.99
 building file list ... done
 
-sent 256 bytes  received 12 bytes  536.00 bytes/sec
+sent 259 bytes  received 12 bytes  542.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 boost_adaptbx/
 boost_adaptbx/command_line/
 
-sent 525 bytes  received 22 bytes  364.67 bytes/sec
-total size is 6,883  speedup is 12.58
+sent 565 bytes  received 55 bytes  1,240.00 bytes/sec
+total size is 6,883  speedup is 11.10
 building file list ... done
 cbflib_adaptbx/
 cbflib_adaptbx/command_line/
 
-sent 242 bytes  received 22 bytes  528.00 bytes/sec
-total size is 1,215  speedup is 4.60
+sent 240 bytes  received 28 bytes  536.00 bytes/sec
+total size is 1,215  speedup is 4.53
 building file list ... done
 
 sent 149 bytes  received 12 bytes  322.00 bytes/sec
@@ -46354,8 +46392,8 @@
 cctbx/command_line/
 cctbx/command_line/web.install.csh
 
-sent 3,055 bytes  received 41 bytes  6,192.00 bytes/sec
-total size is 39,666  speedup is 12.81
+sent 3,142 bytes  received 101 bytes  6,486.00 bytes/sec
+total size is 39,666  speedup is 12.23
 building file list ... done
 
 sent 87 bytes  received 12 bytes  198.00 bytes/sec
@@ -46364,32 +46402,32 @@
 crys3d/
 crys3d/command_line/
 
-sent 484 bytes  received 22 bytes  1,012.00 bytes/sec
-total size is 31,515  speedup is 62.28
+sent 513 bytes  received 52 bytes  1,130.00 bytes/sec
+total size is 31,515  speedup is 55.78
 building file list ... done
 dxtbx/
 dxtbx/command_line/
 
-sent 903 bytes  received 22 bytes  1,850.00 bytes/sec
-total size is 82,029  speedup is 88.68
+sent 959 bytes  received 82 bytes  2,082.00 bytes/sec
+total size is 82,029  speedup is 78.80
 building file list ... done
 fable/
 fable/command_line/
 
-sent 452 bytes  received 22 bytes  948.00 bytes/sec
-total size is 15,542  speedup is 32.79
+sent 485 bytes  received 43 bytes  1,056.00 bytes/sec
+total size is 15,542  speedup is 29.44
 building file list ... done
 gltbx/
 gltbx/command_line/
 
-sent 177 bytes  received 22 bytes  398.00 bytes/sec
-total size is 606  speedup is 3.05
+sent 195 bytes  received 28 bytes  446.00 bytes/sec
+total size is 606  speedup is 2.72
 building file list ... done
 iotbx/
 iotbx/command_line/
 
-sent 2,841 bytes  received 22 bytes  5,726.00 bytes/sec
-total size is 240,961  speedup is 84.16
+sent 3,058 bytes  received 244 bytes  6,604.00 bytes/sec
+total size is 240,961  speedup is 72.97
 building file list ... done
 libtbx/
 libtbx/command_line/
@@ -46410,8 +46448,8 @@
 libtbx/command_line/unpack_in_sources.csh
 libtbx/command_line/valgrind.sh
 
-sent 7,290 bytes  received 329 bytes  15,238.00 bytes/sec
-total size is 175,315  speedup is 23.01
+sent 7,602 bytes  received 614 bytes  16,432.00 bytes/sec
+total size is 175,315  speedup is 21.34
 building file list ... done
 mmtbx/
 mmtbx/command_line/
@@ -46419,8 +46457,8 @@
 mmtbx/regression/command_line/
 mmtbx/regression/command_line/tst_find_residue_in_pdb.py
 
-sent 5,089 bytes  received 47 bytes  10,272.00 bytes/sec
-total size is 709,467  speedup is 138.14
+sent 5,436 bytes  received 413 bytes  11,698.00 bytes/sec
+total size is 709,467  speedup is 121.30
 building file list ... done
 
 sent 76 bytes  received 12 bytes  176.00 bytes/sec
@@ -46429,8 +46467,8 @@
 rstbx/
 rstbx/command_line/
 
-sent 780 bytes  received 22 bytes  1,604.00 bytes/sec
-total size is 11,108  speedup is 13.85
+sent 811 bytes  received 49 bytes  1,720.00 bytes/sec
+total size is 11,108  speedup is 12.92
 building file list ... done
 scitbx/
 scitbx/command_line/
@@ -46441,24 +46479,24 @@
 scitbx/command_line/show_sizes.py
 scitbx/command_line/unicode_examples.py
 
-sent 11,725 bytes  received 136 bytes  23,722.00 bytes/sec
+sent 11,757 bytes  received 136 bytes  23,786.00 bytes/sec
 total size is 9,958  speedup is 0.84
 building file list ... done
 
-sent 152 bytes  received 12 bytes  328.00 bytes/sec
+sent 160 bytes  received 12 bytes  344.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 smtbx/
 smtbx/command_line/
 
-sent 889 bytes  received 22 bytes  1,822.00 bytes/sec
-total size is 37,436  speedup is 41.09
+sent 917 bytes  received 40 bytes  1,914.00 bytes/sec
+total size is 37,436  speedup is 39.12
 building file list ... done
 spotfinder/
 spotfinder/command_line/
 
-sent 519 bytes  received 22 bytes  1,082.00 bytes/sec
-total size is 22,750  speedup is 42.05
+sent 545 bytes  received 43 bytes  1,176.00 bytes/sec
+total size is 22,750  speedup is 38.69
 building file list ... done
 
 sent 87 bytes  received 12 bytes  198.00 bytes/sec
@@ -46467,11 +46505,11 @@
 wxtbx/
 wxtbx/command_line/
 
-sent 470 bytes  received 22 bytes  984.00 bytes/sec
-total size is 16,078  speedup is 32.68
+sent 508 bytes  received 58 bytes  1,132.00 bytes/sec
+total size is 16,078  speedup is 28.41
 building file list ... done
 
-sent 256 bytes  received 12 bytes  536.00 bytes/sec
+sent 259 bytes  received 12 bytes  542.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 boost_adaptbx/graph/
@@ -46504,21 +46542,21 @@
 boost_adaptbx/tests/tst_swig_args.py
 boost_adaptbx/tests/tst_tuple.py
 
-sent 91,642 bytes  received 515 bytes  184,314.00 bytes/sec
+sent 91,657 bytes  received 515 bytes  184,344.00 bytes/sec
 total size is 89,657  speedup is 0.97
 building file list ... done
 cbflib_adaptbx/detectors/
 cbflib_adaptbx/detectors/tst_memory.cpp
 
-sent 1,201 bytes  received 34 bytes  2,470.00 bytes/sec
+sent 1,210 bytes  received 34 bytes  2,488.00 bytes/sec
 total size is 967  speedup is 0.78
 building file list ... done
 ccp4io_adaptbx/
 ccp4io_adaptbx/dev/
 ccp4io_adaptbx/dev/tst_fftlib.py
 
-sent 7,595 bytes  received 44 bytes  15,278.00 bytes/sec
-total size is 9,205  speedup is 1.21
+sent 7,603 bytes  received 44 bytes  15,294.00 bytes/sec
+total size is 9,205  speedup is 1.20
 building file list ... done
 cctbx/adp_restraints/
 cctbx/adptbx/
@@ -46610,21 +46648,21 @@
 cctbx/xray/observations/
 cctbx/xray/targets/
 
-sent 454,811 bytes  received 939 bytes  911,500.00 bytes/sec
-total size is 2,071,527  speedup is 4.55
+sent 455,170 bytes  received 1,314 bytes  912,968.00 bytes/sec
+total size is 2,071,527  speedup is 4.54
 building file list ... done
 cma_es/
 
-sent 118 bytes  received 19 bytes  274.00 bytes/sec
-total size is 3,008  speedup is 21.96
+sent 125 bytes  received 22 bytes  294.00 bytes/sec
+total size is 3,008  speedup is 20.46
 building file list ... done
 crys3d/regression/
 
-sent 380 bytes  received 15 bytes  790.00 bytes/sec
-total size is 41,841  speedup is 105.93
+sent 390 bytes  received 33 bytes  846.00 bytes/sec
+total size is 41,841  speedup is 98.91
 building file list ... done
 
-sent 685 bytes  received 12 bytes  1,394.00 bytes/sec
+sent 689 bytes  received 12 bytes  1,402.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 fable/test/
@@ -46633,12 +46671,12 @@
 fable/test/tst_separate_files.py
 fable/test/tst_show_calls.py
 
-sent 12,885 bytes  received 91 bytes  25,952.00 bytes/sec
-total size is 151,869  speedup is 11.70
+sent 12,931 bytes  received 106 bytes  26,074.00 bytes/sec
+total size is 151,869  speedup is 11.65
 building file list ... done
 
-sent 203 bytes  received 12 bytes  430.00 bytes/sec
-total size is 8,108  speedup is 37.71
+sent 244 bytes  received 24 bytes  536.00 bytes/sec
+total size is 8,108  speedup is 30.25
 building file list ... done
 iotbx/bioinformatics/
 iotbx/bioinformatics/test/
@@ -46687,14 +46725,14 @@
 iotbx/xds/tests/tst_xparm.py
 iotbx/xplor/
 
-sent 273,742 bytes  received 522 bytes  548,528.00 bytes/sec
-total size is 2,423,412  speedup is 8.84
+sent 274,161 bytes  received 933 bytes  550,188.00 bytes/sec
+total size is 2,423,412  speedup is 8.81
 building file list ... done
 libtbx/phil/
 libtbx/queuing_system_utils/
 
-sent 1,250 bytes  received 18 bytes  2,536.00 bytes/sec
-total size is 252,704  speedup is 199.29
+sent 1,343 bytes  received 108 bytes  2,902.00 bytes/sec
+total size is 252,704  speedup is 174.16
 building file list ... done
 mmtbx/atomic_environment_vectors/
 mmtbx/building/
@@ -46787,13 +46825,13 @@
 mmtbx/validation/regression/
 mmtbx/wwpdb/
 
-sent 800,574 bytes  received 930 bytes  1,603,008.00 bytes/sec
-total size is 7,290,260  speedup is 9.10
+sent 801,649 bytes  received 2,031 bytes  1,607,360.00 bytes/sec
+total size is 7,290,260  speedup is 9.07
 building file list ... done
 omptbx/
 
-sent 97 bytes  received 19 bytes  232.00 bytes/sec
-total size is 1,175  speedup is 10.13
+sent 104 bytes  received 22 bytes  252.00 bytes/sec
+total size is 1,175  speedup is 9.33
 building file list ... done
 rstbx/bpcx/
 rstbx/bpcx/detector_model/
@@ -46807,8 +46845,8 @@
 rstbx/sublattice_support/
 rstbx/viewer/
 
-sent 1,039 bytes  received 45 bytes  2,168.00 bytes/sec
-total size is 179,407  speedup is 165.50
+sent 1,064 bytes  received 87 bytes  2,302.00 bytes/sec
+total size is 179,407  speedup is 155.87
 building file list ... done
 scitbx/array_family/
 scitbx/array_family/tst_accessors.cpp
@@ -46915,11 +46953,11 @@
 scitbx/tests/tst_smoothing.py
 scitbx/wigner/
 
-sent 678,202 bytes  received 1,368 bytes  1,359,140.00 bytes/sec
-total size is 1,111,401  speedup is 1.64
+sent 678,478 bytes  received 1,566 bytes  1,360,088.00 bytes/sec
+total size is 1,111,401  speedup is 1.63
 building file list ... done
 
-sent 152 bytes  received 12 bytes  328.00 bytes/sec
+sent 160 bytes  received 12 bytes  344.00 bytes/sec
 total size is 0  speedup is 0.00
 building file list ... done
 smtbx/ab_initio/
@@ -46952,14 +46990,14 @@
 smtbx/tests/
 smtbx/tests/tst_utils.py
 
-sent 144,578 bytes  received 291 bytes  289,738.00 bytes/sec
+sent 144,577 bytes  received 327 bytes  289,808.00 bytes/sec
 total size is 248,243  speedup is 1.71
 building file list ... done
 spotfinder/core_toolbox/
 spotfinder/core_toolbox/boost_python/
 spotfinder/core_toolbox/boost_python/tst_small_image.py
 
-sent 5,471 bytes  received 37 bytes  11,016.00 bytes/sec
+sent 5,476 bytes  received 37 bytes  11,026.00 bytes/sec
 total size is 5,074  speedup is 0.92
 building file list ... done
 tbxx/
@@ -46972,8 +47010,8 @@
 wxtbx/regression/
 wxtbx/regression/tst_process_control.py
 
-sent 2,007 bytes  received 34 bytes  4,082.00 bytes/sec
-total size is 1,770  speedup is 0.87
+sent 2,014 bytes  received 34 bytes  4,096.00 bytes/sec
+total size is 1,770  speedup is 0.86
 building file list ... done
 ./
 annlib_adaptbx/
@@ -47450,7 +47488,7 @@
 smtbx/regression/test_data/thpp.hkl
 smtbx/regression/test_data/thpp.ins
 
-sent 5,018,636 bytes  received 8,866 bytes  10,055,004.00 bytes/sec
+sent 5,020,042 bytes  received 8,866 bytes  10,057,816.00 bytes/sec
 total size is 4,956,934  speedup is 0.99
 make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1'
    dh_install -O--buildsystem=pybuild
@@ -47492,695 +47530,695 @@
 D: dh_python3 dh_python3:205: processing package python3-cctbx...
 D: dh_python3 fs:50: moving files from debian/python3-cctbx/usr/lib/python3.13/dist-packages to debian/python3-cctbx/usr/lib/python3/dist-packages/
 D: dh_python3 tools:232: invoking: /usr/bin/python3.13 -c 'import sysconfig as s; print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))'
-I: dh_python3 fs:421: renaming rstbx_simage_ext.so to rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_scaling_ext.so to mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming dxtbx_flumpy.so to dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_math_ext.so to cctbx_math_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_glmtbx_ext.so to scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming cctbx_orientation_ext.so to cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_pair_interaction_ext.so to mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_fftpack_ext.so to scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming rstbx_simulation_ext.so to rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming rstbx_symmetry_constraints_ext.so to rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_pdb_ext.so to iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_adaptbx_graph_ext.so to boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_geometry_indexing_ext.so to mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming dxtbx_ext.so to dxtbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_chemical_elements_ext.so to cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_adp_restraints_ext.so to cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming annlib_ext.so to annlib_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_geometry_ext.so to cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_xray_ext.so to cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming smtbx_ab_initio_ext.so to smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_detectors_ext.so to iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_adaptbx_graph_metric_ext.so to boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming scitbx_r3_utils_ext.so to scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming fable_ext.so to fable_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_bulk_solvent_ext.so to mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_adaptbx_graph_min_cut_max_flow_ext.so to boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_statistics_ext.so to cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_xray_observations_ext.so to cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming dxtbx_format_image_ext.so to dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_rsr_ext.so to mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_fp_fdp_ext.so to cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_icsd_radii_ext.so to cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_reduce_ext.so to mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_geometry_clash_ext.so to mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_geometry_ext.so to cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_cubicle_neighbors_ext.so to scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_detectors_bruker_ext.so to iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_building_loop_closure_ext.so to mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming dxtbx_flumpy.so to dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming mmtbx_geometry_shared_types_ext.so to mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_symmetry_search_ext.so to cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_validation_ramachandran_ext.so to mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_cif_ext.so to iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_stl_vector_ext.so to scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming rstbx_bandpass_ext.so to rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_adaptbx_graph_breadth_first_search_ext.so to boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_henke_ext.so to cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_multipolar_ext.so to cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_shelx_ext.so to iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming smtbx_refinement_restraints_ext.so to smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_alignment_ext.so to mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_array_family_flex_ext.so to scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming cctbx_translation_search_ext.so to cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming dxtbx_masking_ext.so to dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_miller_ext.so to cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming dxtbx_model_ext.so to dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_symmetry_search_ext.so to cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming spotfinder_dxtbx_ext.so to spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_attenuation_coefficient_ext.so to cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_mtz_ext.so to iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_tls_decompose_ext.so to mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_statistics_ext.so to cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_diffraction_fastbragg_ext.so to rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_dynamics_ext.so to mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_rotamer_fit_ext.so to mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming gltbx_viewer_utils_ext.so to gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_den_restraints_ext.so to mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_array_family_flex_ext.so to cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_adaptbx_boost_thread_test_ext.so to boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_geometry_sphere_surface_sampling_ext.so to mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_fp_fdp_ext.so to cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming smtbx_refinement_least_squares_ext.so to smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_optional_ext.so to boost_optional_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_integration_ext.so to rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_bulk_solvent_ext.so to mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming smtbx_array_family_ext.so to smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_wavelengths_ext.so to cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_math_ext.so to scitbx_math_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_math_ext.so to cctbx_math_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_suffixtree_shared_ext.so to scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_tuple_ext.so to boost_tuple_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_linalg_ext.so to scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming cctbx_geometry_restraints_ext.so to cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_covalent_radii_ext.so to cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_asymmetric_map_ext.so to cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming scitbx_stl_map_ext.so to scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_iso_surface_ext.so to scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_stl_set_ext.so to scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_array_family_flex_ext.so to cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_pdb_hierarchy_ext.so to iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming rstbx_ext.so to rstbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming dxtbx_imageset_ext.so to dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_dssp_ext.so to mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming annlib_ext.so to annlib_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_minpack_ext.so to scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cma_es_ext.so to cma_es_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_wigner_ext.so to scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_chemical_elements_ext.so to cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_simage_ext.so to rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming fable_ext.so to fable_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming dxtbx_format_nexus_ext.so to dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_adaptbx_graph_min_cut_max_flow_ext.so to boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_asymmetric_map_ext.so to cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_xray_observations_ext.so to cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_adaptbx_graph_clustering_algorithm_ext.so to boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_ramachandran_restraints_ext.so to mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_geometry_primitive_ext.so to mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_emma_ext.so to cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_icsd_radii_ext.so to cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming cctbx_sgtbx_asu_ext.so to cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_adaptbx_graph_maximum_clique_ext.so to boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_adaptbx_graph_breadth_first_search_ext.so to boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming scitbx_graphics_utils_ext.so to scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_scalepack_ext.so to iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_building_loop_closure_ext.so to mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_adptbx_ext.so to cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_wildcard_ext.so to iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_anharmonic_ext.so to cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_den_restraints_ext.so to mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_array_family_shared_ext.so to scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming smtbx_stl_map_ext.so to smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming omptbx_ext.so to omptbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_validation_ramachandran_ext.so to mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_xray_scattering_ext.so to cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming boost_rational_ext.so to boost_rational_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_suffixtree_shared_ext.so to scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_french_wilson_ext.so to cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_geometry_sphere_surface_sampling_ext.so to mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_adaptbx_graph_clustering_algorithm_ext.so to boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_lbfgsb_ext.so to scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_geometry_primitive_ext.so to mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_hydrogens_ext.so to mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_tuple_ext.so to boost_tuple_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming smtbx_array_family_ext.so to smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_geometry_clash_ext.so to mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming ccp4io_adaptbx_ext.so to ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_minpack_ext.so to scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_glmtbx_ext.so to scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming spotfinder_array_family_flex_ext.so to spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming smtbx_refinement_least_squares_ext.so to smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_fftpack_ext.so to scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming gltbx_fonts_ext.so to gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming rstbx_indexing_api_ext.so to rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_simulation_ext.so to rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_merging_ext.so to cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_symmetry_constraints_ext.so to rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming omptbx_ext.so to omptbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_array_family_flex_ext.so to rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming boost_adaptbx_graph_connected_component_algorithm_ext.so to boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cma_es_ext.so to cma_es_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_ncs_cartesian_restraints_ext.so to mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_lbfgsb_ext.so to scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_cif_ext.so to iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_pair_interaction_ext.so to mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming smtbx_structure_factors_direct_ext.so to smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming boost_adaptbx_python_streambuf_test_ext.so to boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_dmtbx_ext.so to cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_crystal_ext.so to cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_geometry_indexing_ext.so to mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_array_family_flex_ext.so to scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_dtrek_ext.so to iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_maptbx_ext.so to cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming gltbx_quadrics_ext.so to gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_rigid_body_ext.so to scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_sgtbx_ext.so to cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_xray_scattering_ext.so to cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming dxtbx_masking_ext.so to dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_sparse_ext.so to scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_random_ext.so to scitbx_random_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_ramachandran_restraints_ext.so to mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_math_ext.so to scitbx_math_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming gltbx_util_ext.so to gltbx_util_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_mtz_ext.so to iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming rstbx_array_family_flex_ext.so to rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_ccp4_map_ext.so to iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_wigner_ext.so to scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_tls_utils_ext.so to mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_lbfgs_ext.so to scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_dssp_ext.so to mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_ncs_ext.so to mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_covariance_ext.so to cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_secondary_structure_ext.so to mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_wavelengths_ext.so to cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_suffixtree_single_ext.so to scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_python_meta_ext.so to boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming rstbx_diffraction_fastbragg_ext.so to rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_miller_ext.so to cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_utils_ext.so to mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_french_wilson_ext.so to cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_pdb_hierarchy_ext.so to iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_scalepack_ext.so to iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming boost_adaptbx_graph_graph_structure_comparison_ext.so to boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming gltbx_viewer_utils_ext.so to gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_masks_ext.so to cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_tls_decompose_ext.so to mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_adaptbx_graph_maximum_clique_ext.so to boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming dxtbx_format_nexus_ext.so to dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming rstbx_integration_ext.so to rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_maptbx_bcr_bcr_ext.so to cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_adaptbx_graph_ext.so to boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_ncs_ext.so to mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming determine_unit_cell_ext.so to determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_multipolar_ext.so to cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_henke_ext.so to cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_adaptbx_graph_utility_ext.so to boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cbflib_ext.so to cbflib_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_scaling_ext.so to mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_masks_ext.so to mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming gltbx_gl_ext.so to gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming spotfinder_hough_ext.so to spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_probe_ext.so to mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_detectors_bruker_ext.so to iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_tls_ext.so to mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming dxtbx_format_image_ext.so to dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_dsn6_map_ext.so to iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_bpcx_detector_model_ext.so to rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming gltbx_util_ext.so to gltbx_util_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_xray_ext.so to cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_ncs_cartesian_restraints_ext.so to mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_secondary_structure_ext.so to mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming mmtbx_geometry_asa_ext.so to mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_wildcard_ext.so to iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming regression_test_ext.so to regression_test_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming scitbx_lstbx_normal_equations_ext.so to scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming gltbx_gl_ext.so to gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming gltbx_glu_ext.so to gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_uctbx_ext.so to cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_adaptbx_graph_utility_ext.so to boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_max_lik_ext.so to mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_array_family_shared_ext.so to scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming spotfinder_array_family_flex_ext.so to spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_f_model_ext.so to mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_tiny_pse_ext.so to cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_rigid_body_ext.so to scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_sgtbx_ext.so to cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_probe_ext.so to mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_shelx_ext.so to iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming iotbx_xplor_ext.so to iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming dxtbx_model_ext.so to dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_linalg_ext.so to scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_python_hybrid_times_ext.so to boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming smtbx_refinement_constraints_ext.so to smtbx_refinement_constraints_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming iotbx_dsn6_map_ext.so to iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming regression_test_ext.so to regression_test_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming std_pair_ext.so to std_pair_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_adaptbx_graph_metric_ext.so to boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_tiny_pse_ext.so to cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming spotfinder_dxtbx_ext.so to spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_reference_coordinate_ext.so to mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_anharmonic_ext.so to cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_crystal_ext.so to cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_rsr_ext.so to mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming smtbx_refinement_restraints_ext.so to smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming gltbx_quadrics_ext.so to gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_uctbx_ext.so to cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_ext.so to rstbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming boost_python_meta_ext.so to boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_adp_restraints_ext.so to cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_mosaic_ext.so to mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming spotfinder_distltbx_ext.so to spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_attenuation_coefficient_ext.so to cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_reduce_ext.so to mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_dynamics_ext.so to mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_tls_ext.so to mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming ccp4io_adaptbx_ext.so to ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming std_pair_ext.so to std_pair_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming cctbx_eltbx_neutron_ext.so to cctbx_eltbx_neutron_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_reference_coordinate_ext.so to mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_optional_ext.so to boost_optional_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_utils_ext.so to mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_merging_ext.so to cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_alignment_ext.so to mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming rstbx_bpcx_detector_model_ext.so to rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_python_hybrid_times_ext.so to boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_f_model_ext.so to mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_eltbx_sasaki_ext.so to cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming smtbx_structure_factors_direct_ext.so to smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_pdb_ext.so to iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_maptbx_ext.so to cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_dtrek_ext.so to iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_covalent_radii_ext.so to cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_detectors_ext.so to iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming rstbx_bandpass_ext.so to rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming gltbx_glu_ext.so to gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_sparse_ext.so to scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_dmtbx_ext.so to cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_masks_ext.so to cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming smtbx_stl_map_ext.so to smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_covariance_ext.so to cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so
 I: dh_python3 fs:421: renaming mmtbx_tls_optimise_amplitudes_ext.so to mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming boost_adaptbx_boost_thread_test_ext.so to boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_masks_ext.so to mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming gltbx_fonts_ext.so to gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_emma_ext.so to cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming determine_unit_cell_ext.so to determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_mosaic_ext.so to mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming mmtbx_rotamer_fit_ext.so to mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cbflib_ext.so to cbflib_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming cctbx_maptbx_bcr_bcr_ext.so to cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming scitbx_cubicle_neighbors_ext.so to scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so
-I: dh_python3 fs:421: renaming dxtbx_imageset_ext.so to dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.sweep_strength): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_training): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rama_z): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.py_compile_all): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.data_viewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.insert_write_at_start_of_each_procedure): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rotalyze): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_all_on_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.index): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fmodel): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.quantum_interface): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_source_files_sorted_by_size): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.pdflatex): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.nested_cpp_loops_with_check_signals): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.create): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.image_viewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.explore_completeness): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.cout): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.qttbx.view_structure): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_available_slots): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_residue_in_pdb): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.build_phil_cache): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_editor): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_tests): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_host_and_user): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.biomt_reconstruction): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_as_xyz): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.unique_with_biomt): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.sort_atoms): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.split_data_cif): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mask): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.altloc_remediate): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.model_vs_data): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fake_f_obs): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.nonbonded_overlaps): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_converter): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_box): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.signal_strength): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_accumulation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_ends_with): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.depends_on): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clean_clutter): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_process): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.inspect_r_free_flags): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xmanip): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.cod_select_and_pickle): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.models_as_chains): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.merging_statistics): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.unicode_examples): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.double_overflow): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.tst_memory): cannot parse binary file
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_mtz): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.check_libcpp): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.histogram): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.remove_outliers): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.validate_ligands): doesn't look like a shebang: #! /bin/sh
+I: dh_python3 fs:421: renaming mmtbx_hydrogens_ext.so to mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_stl_vector_ext.so to scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_random_ext.so to scitbx_random_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_tls_utils_ext.so to mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_suffixtree_single_ext.so to scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_iso_surface_ext.so to scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_adptbx_ext.so to cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming smtbx_ab_initio_ext.so to smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_stl_set_ext.so to scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming iotbx_ccp4_map_ext.so to iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming scitbx_lbfgs_ext.so to scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming mmtbx_max_lik_ext.so to mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so
+I: dh_python3 fs:421: renaming cctbx_eltbx_sasaki_ext.so to cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mp_geo): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cc_star): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.show_connectivity): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_env): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_statistics): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.ramalyze): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLviewer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clear_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_not_show_diff): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_model_histogram): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.wait_for_file): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_under_build): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_selfx): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.feature_enhanced_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fft): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_as_fasta): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.inexact): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.generate_error_h): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage_gui): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wavelength_units): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.version): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.structure_factor_timings): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz2map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_mac_app): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.segmentation_fault): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.patterson_map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_regression.test_nightly): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_matching_images): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_pdb): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reindex): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.polder): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.lattice_symmetry): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.read): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cns_as_mtz): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.anomalous_differences_histogram): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.any2unix): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validation_summary): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.fetch_pdb): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_pickled_function): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.dtrace): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.reduce2): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_correlation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bootstrap): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sisa): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.blast_pdb): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emringer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.estimate_bijvoet_ratio): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_sizes): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.as_xray_structure): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.matthews): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mon_lib_cif_triage): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fem): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_installer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image2pickle): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cbetadev): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bibtex): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_statistics): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cbf_read): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.csh): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.getting_started): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.angle): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.get_citation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.split_data_cif): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.subgroups): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.latex): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_does_not_contain_strings): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_peaks_holes): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image2pickle): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites): cannot parse binary file
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_cablam_cache): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.xtriage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_matching_formats): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image2pickle): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_interpretation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_sys_executable): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rigid_bond_test): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.biomt_reconstruction): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_regression.test_nightly): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore2): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_modules): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.ligand_restraints_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.example_viewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_windows_exe): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.chunk): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.git_avoid_merges): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maps): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.display_parallax_correction): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_mtz): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz_as_cif): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.gdb): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.crystal_symmetry_from_any): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.printenv): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.resolution): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.join): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_platform_info): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.install_format): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.water_b_factors): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.hbond): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_selfx): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.bfactor_plot): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_registry): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_unzipsfx): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.merging_statistics): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_dependencies): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_peaks_holes): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_tls_groups): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xtriage): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.debug_memory): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.xplor.map.show_summary): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.try_imports): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remote_processing): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.box_around_molecule): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.mtrix_reconstruction): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.apply_ncs_to_ligand): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.solver): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_peaks_holes): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.join_fragment_files): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.reflection_reader): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser2_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.segmentation_fault): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mask): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.python): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.r_factor_statistics): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_distances): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_training): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_exp_times): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports_crude): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.add_conformations): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.phil): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.symmetry_search): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.refresh): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.gdb): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.validate): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.epydoc_run): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.tcsh): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_binary_bundle): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.display_parallax_correction): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_tests_parallel): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fetch_pdb): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.lattice_symmetry): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.hierarchy): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.blast_pdb): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_mtz): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.aev): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.help): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.box_around_molecule): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_source_files_sorted_by_size): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prepare_pdb_deposition): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emringer): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.seconds_since_the_epoch): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sh): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry): cannot parse binary file
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.select_best_starting_model): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.transfer_crystal_symmetry): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.data_viewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.csv_as_mtz): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.french_wilson): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_blobs): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rama_z): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.analyse_code_comments): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.molprobity): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename_old): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_sphinx_html): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.qscore): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.brehm_diederichs): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emma): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_calls): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.split): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_idealization): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_reader): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.probescore_ligand): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.dump_as_python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.extract_code_from_txt): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.hydrogenate): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.process_predicted_model): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.export_scalepack_unmerged): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_exe): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.gcd): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.eltbx.show_fp_fdp): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.overload): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_model_histogram): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ribbons): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLviewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_under_build): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_mask_info): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_as_cns): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maximum_entropy_map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.kinemage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.super): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.emma): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.nequal): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.try_imports): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_modules): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.image_viewer): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage_gui): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.resource_monitor_plot): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.prime_factors_of): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_old_style_classes): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.show_connectivity): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.create): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser2_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.nested_cpp_loops_with_check_signals): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.plot_anomalous_scattering): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.apply_tapenade_hints): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.cod_select_and_pickle): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cbf_read): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/sphinx.build): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fft): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_file_info): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.space_group_info): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.image_viewer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.validate_ligands): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.compare_datasets): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_number_of_processors): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_reticular_twin_laws): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_process): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_editor): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.geometry_minimization): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maximum_entropy_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.find_active_area): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.getting_started): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_restraints): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reciprocal_space_arrays): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore2): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.f000): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/labelit.png): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.omegalyze): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rama_z): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.plot_detector_models): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.select_best_starting_model): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.arginine_geometry): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_all_on_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_cif): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.scons): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.csh): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_unused_imports): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_interpretation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.inspect_r_free_flags): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.loggraph): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdbtools): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image2pickle): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.table_one): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.flip_symmetric_amino_acids): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.sweep_strength): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename_old): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_module_dependencies): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.omegalyze): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.wait_for_file): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.simple_map_coefficients): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sort_hetatms): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_rotarama_cache): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prune_model): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.molprobity): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.benchmark_refinement): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.join_fragment_files): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_date_and_time): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_remediator): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_include_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.electrons): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_files): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.polder): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.ramalyze): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_dependencies): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_atom_selection): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_correlation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_analysis): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dtrek.to_cns): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.anom_refine): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.line_count): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.perigee): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emma): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remote_processing): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.process_predicted_model): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.chunk): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.massage_data): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_windows_exe): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.signal_strength): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.segment_and_split_map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_binary_bundle): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.file_reader): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.verify_mon_lib_data): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser2_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz.dump): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_pdb): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_does_not_contain_strings): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.water_b_factors): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_untested): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.thin_client): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.easy_qsub): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.visualize_r_factors): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_clutter): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.dynamics): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.auto_sharpen): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.hbond): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_sizes): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_tree): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_registry): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_host_and_user): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install_conda): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_selfx): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.precession_view): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.form_factor_query): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_in_repositories): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_but_no_repr): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_pickled_function): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.sdb_reader): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rotalyze): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_reader): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_systematic_absences): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.explore_completeness): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numpy_version): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.chiral_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.web.install): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_not_show_diff): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_line_count): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.add_from_future_import_division): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.env_run): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.git_avoid_merges): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.as_xray_structure): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ss_idealization): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fake_f_obs): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.patterson_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.refine_anomalous_substructure): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_installer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cbetadev): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLinfo): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_reticular_twin_laws): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cablam): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_suites): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rotalyze): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.french_wilson): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.euclidean_model_matching): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.unicode_examples): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.any2unix): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_dist_paths): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.insert_scale_records): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_selfx): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.auto_sharpen): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLinfo): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.configure): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbf.dump): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.read_sequence): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.easy_qsub): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.raise_exception_for_testing): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_residue_in_pdb): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.double_overflow): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.dtrace): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.grow_density): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.radial_average): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_line_count): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.example_viewer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename_old): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.distance_least_squares): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.helix_sheet_recs_as_pdb_files): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_unzipsfx): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numeric_version): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_diff_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_editor): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_tests): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_as_xyz): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.parallel_simple): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_header): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image_average): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rank_scale_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.detector_superpose): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.benchmark_refinement): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.search_pdb_symmetry): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_file_converter): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_lib_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_idealization): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.resolution): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.cout): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.verify_mon_lib_data): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.find_distances): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.poscar_as_xray_structure): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_matching_images): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.tcsh): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_include_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maps): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.saturation): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_qstat_counts): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.masks): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.omegalyze): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.unpack_in_sources): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_analysis): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.quantum_interface): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_module_dependencies): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.epydoc_run): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fab_elbow_angle): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.qscore): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.file_reader): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.absolute_structure): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.anomalous_differences_histogram): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_repository_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.hydrogenate): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_centers_of_mass): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_ext): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.diffuse): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.crystal_symmetry_from_any): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.exec): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.printenv): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.phil): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fobs_minus_fobs_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_peaks_holes): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cns_as_mtz): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.image_viewer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz.dump): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_ends_with): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_as_cif): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.visualize_r_factors): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.reflection_reader): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLviewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.parallel_simple): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.angle): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image_average): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports_crude): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_tests_parallel): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_reserved_names): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_pdb_mmcif_problems): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cbetadev): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.kinemage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.validate): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.xplor.map.show_summary): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validation_summary): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.reduce2): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.unpack_in_sources): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.comparama): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_box): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.install_format): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.add_from_future_import_division): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sisa): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.env_run): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_sphinx_html): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.build_phil_cache): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_suites): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.read_sequence): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.chiral_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phasertng.HKLviewer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.data_viewer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_diff): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fem): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.lcm): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_xray_structure): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_atom_selection): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.density_modification): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sh): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_platform_info): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_suites): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.check_libcpp): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.probe2): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.any2nexus): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_calls): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.split_models): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz2map): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_r_factors_by_shell): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.explore_metric_symmetry): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_commands): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.compare_datasets): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.helix_sheet_recs_as_pdb_files): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_pythonpath): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/labelit.png): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_completion_simple): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.get_pubmed_citation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image_average): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.qttbx.view_structure): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.split): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.molprobity): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.simple_map_coefficients): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.link_as_geometry_restraints_edits): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.inexact): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_pdb_mmcif_problems): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.b_factor_stats): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_suites): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.plot_anomalous_scattering): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.undowser2_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.arginine_geometry): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numeric_version): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.lcm): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_file_info): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_build_path): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.dlsnxs2cbf): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_tree): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.process_predicted_model): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.xtriage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_cablam_cache): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.data_viewer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_cif_conversion): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.configure): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.gcd): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cablam): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.mp_spotfinder_server_read_file): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dano_as_amplitudes): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.superpose): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_vs_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_model_distances): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.index): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bibtex): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_dist): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_bin_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_atoms_by_name): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.eltbx.show_fp_fdp): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.nonbonded_overlaps): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_remediator): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore2): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_clutter): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.geometry_minimization): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.scons): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_variable_names): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_interpretation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rank_scale_map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.hierarchy): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dtrek.to_cns): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.table_one): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.euclidean_model_matching): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_reserved_names): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.diffuse): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.make_install_HKLviewer_ChimeraX): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.merging_statistics): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.french_wilson): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.overload): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_comparison): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mon_lib_cif_triage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bash): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.fetch_pdb): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_miller_arrays): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_editor): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_full_command_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ss_idealization): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_cctbx_bundle_for_installer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.super): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_xray_structure): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_number_of_processors): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_sys_executable): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.apply_ncs_to_ligand): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.mtz.dump): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.phil): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_exp_times): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_comparison): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_install_script_bat): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cc_star): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_options): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.print_sequence): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.nequal): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.emma): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.split_models): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_xray_structure): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.int_overflow): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.sdb_reader): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phasertng.HKLviewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_unused_imports): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.solver): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_restraints): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_header): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.massage_data): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.kinemage): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_centers_of_mass): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.read): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.emringer_score): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.f000): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wxpython): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.distance_difference): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.apply_tapenade_hints): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_as_fasta): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.radial_average): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mp_geo): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.comparama): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.form_factor_query): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.chiral_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_completion_simple): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.refresh): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_validate): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_options): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.extract_code_from_txt): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.density_modification): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.resource_monitor_plot): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.model_viewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_repository_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser2_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rama_z): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.help): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_systematic_absences): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_matching_formats): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_cif_conversion): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.french_wilson): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_cif): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.add_conformations): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.image_viewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.refine_anomalous_substructure): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.search_pdb_symmetry): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_diff): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fab_elbow_angle): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.distance_least_squares): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.ramalyze): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.valgrind): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.phil): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.generate_error_h): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_vs_map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_interpretation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rigid_bond_test): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.aev): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib): cannot parse binary file
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_file_converter): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.poscar_as_xray_structure): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reciprocal_space_arrays): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fft): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.subgroups): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.find_distances): cannot parse binary file
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.ramalyze): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_files): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.space_group_info): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clear_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.wx_display): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_idealization): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.refine): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.saturation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sort_hetatms): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_diff_map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.get_citation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dano_as_amplitudes): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fft): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.scale): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_distances): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLviewer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.sort_atoms): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_converter): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_files): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.dynamics): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_atoms_by_name): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.mp_spotfinder_server_read_file): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fobs_minus_fobs_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.join): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.divide_by_zero): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.molprobity): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_env): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.perigee): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ringer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_model_distances): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_variable_names): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.dump_as_python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_map): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.valgrind): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_comparison): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_blobs): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clean_clutter): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_available_slots): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLinfo): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_tls_groups): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_cctbx_bundle_for_installer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.validate_H): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.transfer_crystal_symmetry): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.prime_factors_of): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_as_cns): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.python): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.fem_include_search_paths): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_dist): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdbtools): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.thin_client): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.line_count): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_validate): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_files): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.probescore_ligand): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_mac_app): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.py_compile_all): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_statistics): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_date_and_time): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.kinemage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.model_vs_data): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rotalyze): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.explore_metric_symmetry): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.omegalyze): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.b_factor_stats): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_xray_structure): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bootstrap): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.scale): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_accumulation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.brehm_diederichs): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.pdflatex): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prune_model): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.int_overflow): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_commands): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.depends_on): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_exe): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.clashscore2): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.structure_factor_timings): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_mtz): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.make_install_HKLviewer_ChimeraX): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ringer): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_pdb): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_old_style_classes): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_pythonpath): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fmodel): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.anom_refine): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.analyse_code_comments): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.flip_symmetric_amino_acids): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.image_viewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ribbons): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbf.dump): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz_as_cif): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.histogram): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.merging_statistics): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_structure_factors): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_lib_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install_conda): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_bin_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.loggraph): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_ext): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_but_no_repr): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image_average): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cbetadev): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.unique_with_biomt): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.feature_enhanced_map): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.validate_H): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.probe2): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.clashscore2): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_idealization): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_build_path): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.detector_superpose): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.grow_density): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_comparison): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wavelength_units): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.exec): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser_validation): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.path_utility): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.find_active_area): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.mtrix_reconstruction): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_in_repositories): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fetch_pdb): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prepare_pdb_deposition): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.superpose): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename_old): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bash): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.python): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.web.install): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.process_predicted_model): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.unique_with_biomt): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.insert_write_at_start_of_each_procedure): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.masks): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.electrons): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.wx_display): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.print_sequence): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_full_command_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.divide_by_zero): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.debug_memory): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.bfactor_plot): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.altloc_remediate): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_mask_info): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.undowser2_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wxpython): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reindex): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.python): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.raise_exception_for_testing): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.estimate_bijvoet_ratio): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.models_as_chains): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_contains_strings): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_statistics): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename_old): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xtriage): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.mtz.dump): doesn't look like a shebang: #! /bin/sh
 D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.multiplicity_viewer): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.any2nexus): doesn't look like a shebang: #! /bin/sh
-D: dh_python3 fs:338: package python3-cctbx details = {'requires.txt': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/requires.txt'}, 'egg-info': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/PKG-INFO', 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx-3.22.0.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13')}, 'ext_no_version': set()}
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.remove_outliers): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.chiral_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.ligand_restraints_validation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.unique_with_biomt): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.export_scalepack_unmerged): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.path_utility): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.csv_as_mtz): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.insert_scale_records): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_build_path): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.distance_difference): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.get_pubmed_citation): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.tst_memory): cannot parse binary file
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_pdb): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_dist_paths): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xmanip): doesn't look like a shebang: #! /bin/sh
+D: dh_python3 fs:338: package python3-cctbx details = {'requires.txt': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/requires.txt'}, 'egg-info': {'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx-3.22.0.egg-info/PKG-INFO', 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13')}, 'ext_no_version': set()}
 D: dh_python3 depends:103: generating dependencies for package python3-cctbx
 D: dh_python3 pydist:175: trying to find dependency for PIL (python=None)
 D: dh_python3 pydist:209: dependency: module seems to be installed
@@ -48233,7 +48271,7 @@
 D: dh_python3 pydist:175: trying to find dependency for wxPython (python=None)
 D: dh_python3 pydist:209: dependency: module seems to be installed
 D: dh_python3 pydist:284: dependency: included in build-deps
-D: dh_python3 depends:253: D={'python3-natsort', 'python3-scipy', 'python3-wxgtk4.0', 'python3-procrunner', 'python3-requests', 'python3-matplotlib', 'python3-hdf5plugin', 'python3-pymol', 'python3-ordered-set', 'python3-six', 'python3 (<< 3.14)', 'python3-h5py (>= 3)', 'python3-numpy', 'python3-tqdm', 'python3:any', 'python3 (>= 3.13~)', 'python3-pil', 'python3-pint', 'python3-mrcfile', 'python3-nxmx'}; R=[]; S=[]; E=[], B=[]; RT=[]
+D: dh_python3 depends:253: D={'python3 (>= 3.13~)', 'python3-pymol', 'python3 (<< 3.14)', 'python3-matplotlib', 'python3-mrcfile', 'python3-nxmx', 'python3-scipy', 'python3-tqdm', 'python3-pint', 'python3-numpy', 'python3-natsort', 'python3:any', 'python3-pil', 'python3-ordered-set', 'python3-procrunner', 'python3-six', 'python3-h5py (>= 3)', 'python3-hdf5plugin', 'python3-requests', 'python3-wxgtk4.0'}; R=[]; S=[]; E=[], B=[]; RT=[]
    dh_installsystemduser -O--buildsystem=pybuild
    dh_lintian -O--buildsystem=pybuild
 	install -m0755 -d debian/python3-cctbx/usr/share/lintian/overrides
@@ -48245,80 +48283,80 @@
 dh_auto_build -- -s custom --build-args="dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include"
 	pybuild --build -i python{version} -p 3.13 -s custom "--build-args=dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include"
 I: pybuild base:311: dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python3.13/include
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx.so
-	ln -s libcctbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so
+	ln -s libdxtbxspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/librstbx.so
+	ln -s librstbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/librstbx.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so
+	ln -s libscitbx_minpack.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so
 	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libccp4io.so
 	ln -s libccp4io.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libccp4io.so
 	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libspotfinder.so
 	ln -s libspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libspotfinder.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libomptbx.so
-	ln -s libomptbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libomptbx.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/librstbx.so
-	ln -s librstbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/librstbx.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcbf-private.so
-	ln -s libcbf-private.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcbf-private.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so
-	ln -s libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so
-	ln -s libiotbx_mtz.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so
-	ln -s libscitbx_boost_python.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so
-	ln -s libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so
+	ln -s libiotbx_xplor.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so
 	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so
 	ln -s libscitbx_slatec.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libann_adaptor.so
-	ln -s libann_adaptor.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libann_adaptor.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libasymmetric_map.so
-	ln -s libasymmetric_map.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libasymmetric_map.so
 	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so
 	ln -s libiotbx_pdb.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so
-	ln -s libdxtbxspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so
 	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so
 	ln -s libmmtbx_tls.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so
+	ln -s libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcbf-private.so
+	ln -s libcbf-private.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcbf-private.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libomptbx.so
+	ln -s libomptbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libomptbx.so
 	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so
 	ln -s libmmtbx_masks.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so
-	ln -s libiotbx_xplor.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so
-	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so
-	ln -s libscitbx_minpack.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so
+	ln -s libiotbx_mtz.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx.so
+	ln -s libcctbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libasymmetric_map.so
+	ln -s libasymmetric_map.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libasymmetric_map.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so
+	ln -s libscitbx_boost_python.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libann_adaptor.so
+	ln -s libann_adaptor.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libann_adaptor.so
+	rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so
+	ln -s libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so
 	install -m0755 -d debian/libcctbx-dev/usr/lib/cctbx/python3.13
 	rm -f debian/libcctbx-dev/usr/lib/cctbx/python3.13/include
 	ln -s ../../../include/cctbx debian/libcctbx-dev/usr/lib/cctbx/python3.13/include
 make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1'
    dh_strip_nondeterminism -O--buildsystem=pybuild
 	Using 1748535546 as canonical time
-	Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ebi_blast.xml.gz using File::StripNondeterminism::handlers::gzip
 	Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ncbi_blast.xml.gz using File::StripNondeterminism::handlers::gzip
+	Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ebi_blast.xml.gz using File::StripNondeterminism::handlers::gzip
    dh_compress -O--buildsystem=pybuild
-	cd debian/libcctbx0
 	cd debian/libcctbx-dev
 	cd debian/python3-cctbx
-	chmod a-x usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian
+	cd debian/libcctbx0
 	chmod a-x usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian
-	gzip -9nf usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian
-	gzip -9nf usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian
+	chmod a-x usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian
 	chmod a-x usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian
-	cd '/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1'
+	gzip -9nf usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian
+	gzip -9nf usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian
 	gzip -9nf usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian
 	cd '/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1'
 	cd '/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1'
+	cd '/build/reproducible-path/cctbx-2024.10+ds2+~3.22.1+ds1'
    dh_fixperms -O--buildsystem=pybuild
+	find debian/python3-cctbx ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
 	find debian/libcctbx-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
 	find debian/libcctbx0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
-	find debian/python3-cctbx ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
 	find debian/libcctbx0/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
-	find debian/libcctbx0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
 	find debian/libcctbx-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
-	find debian/libcctbx0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
-	find debian/libcctbx0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
+	find debian/libcctbx0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
 	find debian/libcctbx-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
+	find debian/libcctbx0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
 	find debian/libcctbx-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
-	find debian/libcctbx-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
-	find debian/libcctbx-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
+	find debian/libcctbx0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
 	find debian/python3-cctbx/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-cctbx/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
+	find debian/libcctbx-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
 	find debian/python3-cctbx/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
+	find debian/libcctbx-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
 	find debian/python3-cctbx/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
 	find debian/python3-cctbx -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
 	find debian/python3-cctbx/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
@@ -48334,193 +48372,175 @@
 	objcopy --compress-debug-sections debian/python3-cctbx/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-cctbx.debug
 	chmod 0644 -- debian/python3-cctbx/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-cctbx.debug
    dh_strip -a -O--buildsystem=pybuild
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/3ca9cc0c98a1104f02ce828cdb950578776846.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/3ca9cc0c98a1104f02ce828cdb950578776846.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/3ca9cc0c98a1104f02ce828cdb950578776846.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/68
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/68/3c4461766a85cf5061e24fcf9085c8f4d48d1f.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/68/3c4461766a85cf5061e24fcf9085c8f4d48d1f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/68/3c4461766a85cf5061e24fcf9085c8f4d48d1f.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/d5ebe42273136ac2ee0996deb514d6b679615f.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/d5ebe42273136ac2ee0996deb514d6b679615f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/d5ebe42273136ac2ee0996deb514d6b679615f.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/8d
 	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/8d/2462218972f5509fd357b69894ed7af4d01406.debug
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/8d/2462218972f5509fd357b69894ed7af4d01406.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1
 	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/8d/2462218972f5509fd357b69894ed7af4d01406.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/57ff91ce7421294925a4c21d6d7dedb12c50cf.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/57ff91ce7421294925a4c21d6d7dedb12c50cf.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/57ff91ce7421294925a4c21d6d7dedb12c50cf.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e8
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e8/759fd27ecd1c8e9cbd44225efbd853c91097ce.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e8/759fd27ecd1c8e9cbd44225efbd853c91097ce.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e8/759fd27ecd1c8e9cbd44225efbd853c91097ce.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/e7dd1e477e54d45e37e3609d61aa84e908939d.debug
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/eaed8e6a9b7f210f5cb400423832dfa039b8fb.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/eaed8e6a9b7f210f5cb400423832dfa039b8fb.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/eaed8e6a9b7f210f5cb400423832dfa039b8fb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/e7dd1e477e54d45e37e3609d61aa84e908939d.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/53410686b2bcedc0079bc6acc636649f0ead2b.debug
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/e7dd1e477e54d45e37e3609d61aa84e908939d.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/40
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/40/5358332e32e587444746d5af219458138b331e.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/40/5358332e32e587444746d5af219458138b331e.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/40/5358332e32e587444746d5af219458138b331e.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7e
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7e/ccb96d9728f3ebc806cc6345e78c27025454ac.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7e/ccb96d9728f3ebc806cc6345e78c27025454ac.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7e/ccb96d9728f3ebc806cc6345e78c27025454ac.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/fc3274f0cb260c070f0a1ec9d2044981d5e13e.debug
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/3ca9cc0c98a1104f02ce828cdb950578776846.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/3ca9cc0c98a1104f02ce828cdb950578776846.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/fc3274f0cb260c070f0a1ec9d2044981d5e13e.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/3ca9cc0c98a1104f02ce828cdb950578776846.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/fc3274f0cb260c070f0a1ec9d2044981d5e13e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/da
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/da/9d89b7d5807aed76e424d446d7a0db9da76c64.debug
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41
 	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/87a637a0caa6a1749389632672ab33341e611a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/53410686b2bcedc0079bc6acc636649f0ead2b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/53410686b2bcedc0079bc6acc636649f0ead2b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/b5ad6375a96361c06c81cb6299ab7eb8b7b3ac.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/b5ad6375a96361c06c81cb6299ab7eb8b7b3ac.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/b5ad6375a96361c06c81cb6299ab7eb8b7b3ac.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/c14ddc21a4d2a2b3ec2eea0317f6121381fce8.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/c14ddc21a4d2a2b3ec2eea0317f6121381fce8.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/c14ddc21a4d2a2b3ec2eea0317f6121381fce8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/da/9d89b7d5807aed76e424d446d7a0db9da76c64.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/da/9d89b7d5807aed76e424d446d7a0db9da76c64.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0838f779054aa294a97529aa96a723e65e8d35.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0838f779054aa294a97529aa96a723e65e8d35.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0838f779054aa294a97529aa96a723e65e8d35.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f3fd203e9d2e3dd56fc5705026aa8699e590c9.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f3fd203e9d2e3dd56fc5705026aa8699e590c9.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f3fd203e9d2e3dd56fc5705026aa8699e590c9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/b214969e2e5b3dc57eadb7f9baeca58a5d48d5.debug
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/87a637a0caa6a1749389632672ab33341e611a.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/1120436ecdca9927199af2d3aeadd33d43f65e.debug
 	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/87a637a0caa6a1749389632672ab33341e611a.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d
 	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/ca604298e0d97404e92b98fd937d5b7e8528e2.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/b214969e2e5b3dc57eadb7f9baeca58a5d48d5.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/b214969e2e5b3dc57eadb7f9baeca58a5d48d5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/ca604298e0d97404e92b98fd937d5b7e8528e2.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/1120436ecdca9927199af2d3aeadd33d43f65e.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/ca604298e0d97404e92b98fd937d5b7e8528e2.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/1120436ecdca9927199af2d3aeadd33d43f65e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/ff8290f134166a078c8e1a30c5ca666e428b0f.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/ff8290f134166a078c8e1a30c5ca666e428b0f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a5
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a5/363ce94189e7db3db73147868ae2ccd6737c72.debug
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/ff8290f134166a078c8e1a30c5ca666e428b0f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/f1a0178d97bac5964ddd739a02d968e6c5e0fe.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a5/363ce94189e7db3db73147868ae2ccd6737c72.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a5/363ce94189e7db3db73147868ae2ccd6737c72.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/f1a0178d97bac5964ddd739a02d968e6c5e0fe.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5c
 	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5c/4d98b6a416b28980af40bcbd98d222d1f5f041.debug
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/f1a0178d97bac5964ddd739a02d968e6c5e0fe.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/b79aaecff27cdd25325b3072e6353695204754.debug
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5c/4d98b6a416b28980af40bcbd98d222d1f5f041.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/9732b660416bf8e530d096c1010fe51b9355bc.debug
 	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5c/4d98b6a416b28980af40bcbd98d222d1f5f041.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/b79aaecff27cdd25325b3072e6353695204754.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/b79aaecff27cdd25325b3072e6353695204754.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/a04081f62ef33e02b538bb8f74e9e7e444c221.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/a04081f62ef33e02b538bb8f74e9e7e444c221.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/a04081f62ef33e02b538bb8f74e9e7e444c221.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/f2d110947ec73aba311048f1759d768855a7c1.debug
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/31
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/31/2c143a7a5b22d4518ca06591ce84d19f009c3a.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/31/2c143a7a5b22d4518ca06591ce84d19f009c3a.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/31/2c143a7a5b22d4518ca06591ce84d19f009c3a.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/f2d110947ec73aba311048f1759d768855a7c1.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d3
 	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d3/d0fe33333ea8c4fc28fab6fa8b4827667cb7de.debug
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/f2d110947ec73aba311048f1759d768855a7c1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/e7360ef23cdc708578ea90b7ccda3b8511ed6c.debug
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d3/d0fe33333ea8c4fc28fab6fa8b4827667cb7de.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1
 	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d3/d0fe33333ea8c4fc28fab6fa8b4827667cb7de.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9b
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9b/eda07d595af1017d3e51b1c4e2e03d0a8ff0da.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9b/eda07d595af1017d3e51b1c4e2e03d0a8ff0da.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9b/eda07d595af1017d3e51b1c4e2e03d0a8ff0da.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/e7360ef23cdc708578ea90b7ccda3b8511ed6c.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/57ff91ce7421294925a4c21d6d7dedb12c50cf.debug
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/e7360ef23cdc708578ea90b7ccda3b8511ed6c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/57ff91ce7421294925a4c21d6d7dedb12c50cf.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/57ff91ce7421294925a4c21d6d7dedb12c50cf.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e8
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e8/759fd27ecd1c8e9cbd44225efbd853c91097ce.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e8/759fd27ecd1c8e9cbd44225efbd853c91097ce.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e8/759fd27ecd1c8e9cbd44225efbd853c91097ce.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ce
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ce/8032ca2d3a0734ea3c1047e2f1be7c6930505b.debug
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/05
 	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/05/d43fd67983c38c0871490cb47c8abf6211318f.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/9732b660416bf8e530d096c1010fe51b9355bc.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/9732b660416bf8e530d096c1010fe51b9355bc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3a3e38d25cb9381d4bc62be575a5505ab4cfa8.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ce/8032ca2d3a0734ea3c1047e2f1be7c6930505b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ce/8032ca2d3a0734ea3c1047e2f1be7c6930505b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/424ec1b4f5f97bcc28b7bfd7c6a2199fd3c32e.debug
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/05/d43fd67983c38c0871490cb47c8abf6211318f.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/424ec1b4f5f97bcc28b7bfd7c6a2199fd3c32e.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/05/d43fd67983c38c0871490cb47c8abf6211318f.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3a3e38d25cb9381d4bc62be575a5505ab4cfa8.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3a3e38d25cb9381d4bc62be575a5505ab4cfa8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/424ec1b4f5f97bcc28b7bfd7c6a2199fd3c32e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96
+	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/e7dd1e477e54d45e37e3609d61aa84e908939d.debug
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/3e36a79552675417dea5fce4d93700716d1881.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/3e36a79552675417dea5fce4d93700716d1881.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/3e36a79552675417dea5fce4d93700716d1881.debug debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/feafb45ab9e68dd114f77cf1c1204045f36566.debug
+	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/e7dd1e477e54d45e37e3609d61aa84e908939d.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1
+	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/e7dd1e477e54d45e37e3609d61aa84e908939d.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/feafb45ab9e68dd114f77cf1c1204045f36566.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f6
 	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f6/5c787573efa16d60122524da217ae742aa3d52.debug
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8911080f5ee5b6943fa363fe67f0b4ad76eac5.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8911080f5ee5b6943fa363fe67f0b4ad76eac5.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8911080f5ee5b6943fa363fe67f0b4ad76eac5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/f1a0178d97bac5964ddd739a02d968e6c5e0fe.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/f1a0178d97bac5964ddd739a02d968e6c5e0fe.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/f1a0178d97bac5964ddd739a02d968e6c5e0fe.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/23adf86db5b5604897241070224bcab457c905.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/23adf86db5b5604897241070224bcab457c905.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/23adf86db5b5604897241070224bcab457c905.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/e4c1ba799eea1cf2aded0f76cb596b6d7d82da.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/e4c1ba799eea1cf2aded0f76cb596b6d7d82da.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/e4c1ba799eea1cf2aded0f76cb596b6d7d82da.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/dadbcd98521b705342b62517acf913a43cc356.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/dadbcd98521b705342b62517acf913a43cc356.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/feafb45ab9e68dd114f77cf1c1204045f36566.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8cf2505fc360a32e000fbe2ebe4691d56fe014.debug
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f6/5c787573efa16d60122524da217ae742aa3d52.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/dadbcd98521b705342b62517acf913a43cc356.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f6/5c787573efa16d60122524da217ae742aa3d52.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/51caafcdae65998c0d8b638fc2dfb7aa236866.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/51caafcdae65998c0d8b638fc2dfb7aa236866.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/51caafcdae65998c0d8b638fc2dfb7aa236866.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/68
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/68/3c4461766a85cf5061e24fcf9085c8f4d48d1f.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/68/3c4461766a85cf5061e24fcf9085c8f4d48d1f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/68/3c4461766a85cf5061e24fcf9085c8f4d48d1f.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/c1143a09d1e1b74d14c756f063b9f9dccf7593.debug
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/d5ebe42273136ac2ee0996deb514d6b679615f.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/d5ebe42273136ac2ee0996deb514d6b679615f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/d5ebe42273136ac2ee0996deb514d6b679615f.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7e
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7e/ccb96d9728f3ebc806cc6345e78c27025454ac.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/c1143a09d1e1b74d14c756f063b9f9dccf7593.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7e/ccb96d9728f3ebc806cc6345e78c27025454ac.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7e/ccb96d9728f3ebc806cc6345e78c27025454ac.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/c1143a09d1e1b74d14c756f063b9f9dccf7593.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/40
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/40/5358332e32e587444746d5af219458138b331e.debug
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/4eaadbc0874067701b3337dcff6c3753685e68.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/40/5358332e32e587444746d5af219458138b331e.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/40/5358332e32e587444746d5af219458138b331e.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9b
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9b/eda07d595af1017d3e51b1c4e2e03d0a8ff0da.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/4eaadbc0874067701b3337dcff6c3753685e68.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9b/eda07d595af1017d3e51b1c4e2e03d0a8ff0da.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/4eaadbc0874067701b3337dcff6c3753685e68.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9b/eda07d595af1017d3e51b1c4e2e03d0a8ff0da.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/6dc48704cafb8789cf9085531843f9cdd5831b.debug
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/31
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/31/2c143a7a5b22d4518ca06591ce84d19f009c3a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/6dc48704cafb8789cf9085531843f9cdd5831b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/6dc48704cafb8789cf9085531843f9cdd5831b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/377cf8c7a389446d0b7a6104d1ef6630c2f1a3.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/377cf8c7a389446d0b7a6104d1ef6630c2f1a3.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/377cf8c7a389446d0b7a6104d1ef6630c2f1a3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9b2290cf824d8837e02c8b64e4a6e0bce16707.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9b2290cf824d8837e02c8b64e4a6e0bce16707.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9b2290cf824d8837e02c8b64e4a6e0bce16707.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/94
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/94/5744ce8e135e95d2c1c02e94f3b6985e4edf9c.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/31/2c143a7a5b22d4518ca06591ce84d19f009c3a.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/31/2c143a7a5b22d4518ca06591ce84d19f009c3a.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/a04081f62ef33e02b538bb8f74e9e7e444c221.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/a04081f62ef33e02b538bb8f74e9e7e444c221.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/96/a04081f62ef33e02b538bb8f74e9e7e444c221.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a5
-	objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a5/363ce94189e7db3db73147868ae2ccd6737c72.debug
-	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a5/363ce94189e7db3db73147868ae2ccd6737c72.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1
-	objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a5/363ce94189e7db3db73147868ae2ccd6737c72.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8cf2505fc360a32e000fbe2ebe4691d56fe014.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz
 	cp --reflink=auto -a debian/libcctbx0/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz
 	rm -fr debian/libcctbx0/usr/lib/debug/.dwz
@@ -48528,869 +48548,922 @@
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc
 	ln -s libcctbx0 debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc/libcctbx0-dbgsym
 	install -m0755 -d debian/.debhelper/libcctbx0
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/94/5744ce8e135e95d2c1c02e94f3b6985e4edf9c.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/94/5744ce8e135e95d2c1c02e94f3b6985e4edf9c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0f3b25ac7067db90727695c97be1c9a516e0bc.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0f3b25ac7067db90727695c97be1c9a516e0bc.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0f3b25ac7067db90727695c97be1c9a516e0bc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/cc7959eb21798b0c6403ef6113a3d7ef69d0f6.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/cc7959eb21798b0c6403ef6113a3d7ef69d0f6.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/cc7959eb21798b0c6403ef6113a3d7ef69d0f6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/7adc1849ca2e81c566ec5367dccdd77bd7c2f3.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/7adc1849ca2e81c566ec5367dccdd77bd7c2f3.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/7adc1849ca2e81c566ec5367dccdd77bd7c2f3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/3954791df97225f6569b56a85fd8aeef9d610e.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/3954791df97225f6569b56a85fd8aeef9d610e.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/3954791df97225f6569b56a85fd8aeef9d610e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/e7b80af8cd1c0513a05eebf00b37c73f108c52.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/e7b80af8cd1c0513a05eebf00b37c73f108c52.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/e7b80af8cd1c0513a05eebf00b37c73f108c52.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/5e0da477482b768238768c98bdf191fa13b5b0.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/5e0da477482b768238768c98bdf191fa13b5b0.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/5e0da477482b768238768c98bdf191fa13b5b0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8cf2505fc360a32e000fbe2ebe4691d56fe014.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/e0213a16c9e4e5edee90d2171aa39b297ce144.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/e0213a16c9e4e5edee90d2171aa39b297ce144.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/e0213a16c9e4e5edee90d2171aa39b297ce144.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/cd76170cc52e04a6f0c9b383735c85dacb6d2a.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/cd76170cc52e04a6f0c9b383735c85dacb6d2a.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/cd76170cc52e04a6f0c9b383735c85dacb6d2a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/53410686b2bcedc0079bc6acc636649f0ead2b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/53410686b2bcedc0079bc6acc636649f0ead2b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/53410686b2bcedc0079bc6acc636649f0ead2b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/f09f7ef12d04bc074feafe20c6bbdb4ceb1060.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/f09f7ef12d04bc074feafe20c6bbdb4ceb1060.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/f09f7ef12d04bc074feafe20c6bbdb4ceb1060.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/dadbcd98521b705342b62517acf913a43cc356.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/dadbcd98521b705342b62517acf913a43cc356.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/dadbcd98521b705342b62517acf913a43cc356.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/11bce9d64e4ffe59c0b022fe2530416ff2245c.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/11bce9d64e4ffe59c0b022fe2530416ff2245c.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/11bce9d64e4ffe59c0b022fe2530416ff2245c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/9f9750350895283ed2e4aa3e0a907364ee915a.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/9f9750350895283ed2e4aa3e0a907364ee915a.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/9f9750350895283ed2e4aa3e0a907364ee915a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/b461dae722daa0cff80819f9f89c13ba37d281.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/b461dae722daa0cff80819f9f89c13ba37d281.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/b461dae722daa0cff80819f9f89c13ba37d281.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/77db996deffe0edef0a591f936b4d39fc25f69.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/77db996deffe0edef0a591f936b4d39fc25f69.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/77db996deffe0edef0a591f936b4d39fc25f69.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/92eeef22df97f9fb1bf1165d513dd740edbb00.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/92eeef22df97f9fb1bf1165d513dd740edbb00.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/92eeef22df97f9fb1bf1165d513dd740edbb00.debug debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/8232b2cbc70f37bcc7cf911b82353297b01cc9.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/8232b2cbc70f37bcc7cf911b82353297b01cc9.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/8232b2cbc70f37bcc7cf911b82353297b01cc9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/14ee787c5b920fcd2a318b5bcb12dd09954fcb.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/14ee787c5b920fcd2a318b5bcb12dd09954fcb.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/14ee787c5b920fcd2a318b5bcb12dd09954fcb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/e7360ef23cdc708578ea90b7ccda3b8511ed6c.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/e7360ef23cdc708578ea90b7ccda3b8511ed6c.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/e7360ef23cdc708578ea90b7ccda3b8511ed6c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/80d93e8788bbe9ee891de5a5726b8ddb067185.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/80d93e8788bbe9ee891de5a5726b8ddb067185.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/80d93e8788bbe9ee891de5a5726b8ddb067185.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/9a11e923ff41c42664549da9cf51d3980c8d2b.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/9a11e923ff41c42664549da9cf51d3980c8d2b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/9a11e923ff41c42664549da9cf51d3980c8d2b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/41bbc041aaebd09c9c1c265db4b459add8d7f3.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/41bbc041aaebd09c9c1c265db4b459add8d7f3.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/41bbc041aaebd09c9c1c265db4b459add8d7f3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/feafb45ab9e68dd114f77cf1c1204045f36566.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/feafb45ab9e68dd114f77cf1c1204045f36566.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/feafb45ab9e68dd114f77cf1c1204045f36566.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/a1b4b2d5d59a2c7ab7272b773addbb42851e71.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/a1b4b2d5d59a2c7ab7272b773addbb42851e71.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/a1b4b2d5d59a2c7ab7272b773addbb42851e71.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/953ce1a11e9c7656ca0fc5e2c62fdda240d70a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/953ce1a11e9c7656ca0fc5e2c62fdda240d70a.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/953ce1a11e9c7656ca0fc5e2c62fdda240d70a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/0a69d11a709846bdb08e663a002b025e97b020.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/0a69d11a709846bdb08e663a002b025e97b020.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/0a69d11a709846bdb08e663a002b025e97b020.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/653f93ae5bf18d0ba55f06b37928b30d3dc12d.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/653f93ae5bf18d0ba55f06b37928b30d3dc12d.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/653f93ae5bf18d0ba55f06b37928b30d3dc12d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/3a9ca53b7f8bc50cb51e938ad5fb57feee9b33.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/3a9ca53b7f8bc50cb51e938ad5fb57feee9b33.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/3a9ca53b7f8bc50cb51e938ad5fb57feee9b33.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/5549ac230ddacee72a642f183094e3fe3afd9f.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/5549ac230ddacee72a642f183094e3fe3afd9f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/5549ac230ddacee72a642f183094e3fe3afd9f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3a3e38d25cb9381d4bc62be575a5505ab4cfa8.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3a3e38d25cb9381d4bc62be575a5505ab4cfa8.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3a3e38d25cb9381d4bc62be575a5505ab4cfa8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/5c3b615a1a71e68982cc3aff4d66a13ce44aa6.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/5c3b615a1a71e68982cc3aff4d66a13ce44aa6.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/5c3b615a1a71e68982cc3aff4d66a13ce44aa6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/d5eab4b9e9fb75aa2dd3e23c1467380e319911.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/d5eab4b9e9fb75aa2dd3e23c1467380e319911.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/d5eab4b9e9fb75aa2dd3e23c1467380e319911.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/b3c0b2eb7389bf1a0222b5c4f33d29c4759e36.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/b3c0b2eb7389bf1a0222b5c4f33d29c4759e36.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/b3c0b2eb7389bf1a0222b5c4f33d29c4759e36.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/43d95631e03f416cd052dd94d8bdf3148e6409.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/43d95631e03f416cd052dd94d8bdf3148e6409.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/43d95631e03f416cd052dd94d8bdf3148e6409.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/aad590fa945fd4ea77238503d60d2495a60a94.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/aad590fa945fd4ea77238503d60d2495a60a94.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/aad590fa945fd4ea77238503d60d2495a60a94.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/faa2f4a217024c8778008ff8334956be904913.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/faa2f4a217024c8778008ff8334956be904913.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/faa2f4a217024c8778008ff8334956be904913.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/261f93771cfd13195debb332ff3e61637c7960.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/261f93771cfd13195debb332ff3e61637c7960.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/261f93771cfd13195debb332ff3e61637c7960.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/34c805d3a896946c66117d240177adf9048a98.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/34c805d3a896946c66117d240177adf9048a98.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/34c805d3a896946c66117d240177adf9048a98.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/a157c21b9930822f0e86081fa4fcf1b3abc212.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/a157c21b9930822f0e86081fa4fcf1b3abc212.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/a157c21b9930822f0e86081fa4fcf1b3abc212.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/f6cd4a0ef8d2873ed951a9a1ce086cb3d51b95.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/f6cd4a0ef8d2873ed951a9a1ce086cb3d51b95.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/f6cd4a0ef8d2873ed951a9a1ce086cb3d51b95.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/11c9b655f1558082e8de88071fe9da146a94e7.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/11c9b655f1558082e8de88071fe9da146a94e7.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/11c9b655f1558082e8de88071fe9da146a94e7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/35bb8b619dc11597a83cdb47292dad42463901.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/35bb8b619dc11597a83cdb47292dad42463901.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/35bb8b619dc11597a83cdb47292dad42463901.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/ecfadd0f5ad6066c936ff1c365bcfcc04c79bb.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/ecfadd0f5ad6066c936ff1c365bcfcc04c79bb.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/ecfadd0f5ad6066c936ff1c365bcfcc04c79bb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/1396331f8b5707b63763f6509eb1b077c85589.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/1396331f8b5707b63763f6509eb1b077c85589.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/1396331f8b5707b63763f6509eb1b077c85589.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/e363c500fb9f152e60218fd533e5372e333e2f.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/e363c500fb9f152e60218fd533e5372e333e2f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/e363c500fb9f152e60218fd533e5372e333e2f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/92eeef22df97f9fb1bf1165d513dd740edbb00.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/92eeef22df97f9fb1bf1165d513dd740edbb00.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/92eeef22df97f9fb1bf1165d513dd740edbb00.debug debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/6e075dffd22ca747eecf1760a2e2f9bbc93ed6.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/6e075dffd22ca747eecf1760a2e2f9bbc93ed6.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/6e075dffd22ca747eecf1760a2e2f9bbc93ed6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/31a25060d74902d4763e4930aba47d31b197fa.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/31a25060d74902d4763e4930aba47d31b197fa.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/31a25060d74902d4763e4930aba47d31b197fa.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/f29e8370a510b52813cce17eaa797ca59a8c8d.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/f29e8370a510b52813cce17eaa797ca59a8c8d.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/f29e8370a510b52813cce17eaa797ca59a8c8d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/e1218d8e8e9783af83fe6e7ef2b3339f93d7de.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/e1218d8e8e9783af83fe6e7ef2b3339f93d7de.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/e1218d8e8e9783af83fe6e7ef2b3339f93d7de.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a53107a8c8c0205970162f00792f28cfdf8a8d.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a53107a8c8c0205970162f00792f28cfdf8a8d.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a53107a8c8c0205970162f00792f28cfdf8a8d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/ee4bcfd96c847a1a69b2c2bebb939fed4e9ccf.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/ee4bcfd96c847a1a69b2c2bebb939fed4e9ccf.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/ee4bcfd96c847a1a69b2c2bebb939fed4e9ccf.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/23adf86db5b5604897241070224bcab457c905.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/23adf86db5b5604897241070224bcab457c905.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/23adf86db5b5604897241070224bcab457c905.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0b
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0b/69f2b7c69ab239d5a8f96a67e4d9d285c56f97.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0b/69f2b7c69ab239d5a8f96a67e4d9d285c56f97.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0b/69f2b7c69ab239d5a8f96a67e4d9d285c56f97.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/7fcff47b45c7005bbd2dc276f86713134fbe4d.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/7fcff47b45c7005bbd2dc276f86713134fbe4d.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/7fcff47b45c7005bbd2dc276f86713134fbe4d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/f09f7ef12d04bc074feafe20c6bbdb4ceb1060.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/f09f7ef12d04bc074feafe20c6bbdb4ceb1060.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/f09f7ef12d04bc074feafe20c6bbdb4ceb1060.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/e94d532584dff4c160382a947563e2ba489510.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/e94d532584dff4c160382a947563e2ba489510.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/e94d532584dff4c160382a947563e2ba489510.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/b768f133f2adea817965c8a946253ef0d07480.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/b768f133f2adea817965c8a946253ef0d07480.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/b768f133f2adea817965c8a946253ef0d07480.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/06b31b834ed1c0cde3ed66bd733067172a4b5b.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/06b31b834ed1c0cde3ed66bd733067172a4b5b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/06b31b834ed1c0cde3ed66bd733067172a4b5b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/b214969e2e5b3dc57eadb7f9baeca58a5d48d5.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/b214969e2e5b3dc57eadb7f9baeca58a5d48d5.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/b214969e2e5b3dc57eadb7f9baeca58a5d48d5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/99e48331515c2dfaee1e16397cdb3a92dad00f.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/99e48331515c2dfaee1e16397cdb3a92dad00f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/99e48331515c2dfaee1e16397cdb3a92dad00f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/6da9f62f00b56978882d1682e091f80f0db888.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/6da9f62f00b56978882d1682e091f80f0db888.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/6da9f62f00b56978882d1682e091f80f0db888.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/cc667e4d467af722d175bf4d47013c881d78db.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/cc667e4d467af722d175bf4d47013c881d78db.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/cc667e4d467af722d175bf4d47013c881d78db.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/486bd264c85ee371b89c4f870cabc8c0523c56.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/486bd264c85ee371b89c4f870cabc8c0523c56.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/486bd264c85ee371b89c4f870cabc8c0523c56.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ad6f0364b818436fab4fb33fa4474136fdc691.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ad6f0364b818436fab4fb33fa4474136fdc691.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ad6f0364b818436fab4fb33fa4474136fdc691.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/ab3f2378df6f73513f576d4d4600ecf310d8a9.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/ab3f2378df6f73513f576d4d4600ecf310d8a9.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/ab3f2378df6f73513f576d4d4600ecf310d8a9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/a85996f6f5f668df1ed5591ff141c4654b113b.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/a85996f6f5f668df1ed5591ff141c4654b113b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/a85996f6f5f668df1ed5591ff141c4654b113b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/aa938034d58edbbabb5dbdf2c311b55481aa8f.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/aa938034d58edbbabb5dbdf2c311b55481aa8f.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/aa938034d58edbbabb5dbdf2c311b55481aa8f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/564800d16eb39028908b473a495151726d11ca.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/564800d16eb39028908b473a495151726d11ca.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/564800d16eb39028908b473a495151726d11ca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/cfe6f8af238d870592e9c25d66676da57f9165.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/cfe6f8af238d870592e9c25d66676da57f9165.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/cfe6f8af238d870592e9c25d66676da57f9165.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/bd57d51e76974d26362b867c16c96e5221b8cb.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/bd57d51e76974d26362b867c16c96e5221b8cb.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/bd57d51e76974d26362b867c16c96e5221b8cb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/b5ad6375a96361c06c81cb6299ab7eb8b7b3ac.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/b5ad6375a96361c06c81cb6299ab7eb8b7b3ac.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/b5ad6375a96361c06c81cb6299ab7eb8b7b3ac.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/653f93ae5bf18d0ba55f06b37928b30d3dc12d.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/653f93ae5bf18d0ba55f06b37928b30d3dc12d.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/653f93ae5bf18d0ba55f06b37928b30d3dc12d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d5e266ce732b727090117a86104c8fc307ef73.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d5e266ce732b727090117a86104c8fc307ef73.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d5e266ce732b727090117a86104c8fc307ef73.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/4a4afc2f1a1896d4227ab465197ed59075f932.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/4a4afc2f1a1896d4227ab465197ed59075f932.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/4a4afc2f1a1896d4227ab465197ed59075f932.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/f6cd4a0ef8d2873ed951a9a1ce086cb3d51b95.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/f6cd4a0ef8d2873ed951a9a1ce086cb3d51b95.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/f6cd4a0ef8d2873ed951a9a1ce086cb3d51b95.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/4eaadbc0874067701b3337dcff6c3753685e68.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/4eaadbc0874067701b3337dcff6c3753685e68.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/4eaadbc0874067701b3337dcff6c3753685e68.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/8975d01e1be7513882242364b29a796e955f2b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/8975d01e1be7513882242364b29a796e955f2b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/8975d01e1be7513882242364b29a796e955f2b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/2badf3cfb4ec057f47eeda9e8dd32d12e72a77.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/2badf3cfb4ec057f47eeda9e8dd32d12e72a77.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/2badf3cfb4ec057f47eeda9e8dd32d12e72a77.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/41bbc041aaebd09c9c1c265db4b459add8d7f3.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/41bbc041aaebd09c9c1c265db4b459add8d7f3.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/41bbc041aaebd09c9c1c265db4b459add8d7f3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/275fa6cca4ad1288f19cdc769fd0f2f4b92e03.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/275fa6cca4ad1288f19cdc769fd0f2f4b92e03.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/275fa6cca4ad1288f19cdc769fd0f2f4b92e03.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/b768f133f2adea817965c8a946253ef0d07480.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/b768f133f2adea817965c8a946253ef0d07480.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/b768f133f2adea817965c8a946253ef0d07480.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/6df91aa602cf84dd6ef642ca6df9a7bf86a0fc.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/6df91aa602cf84dd6ef642ca6df9a7bf86a0fc.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/6df91aa602cf84dd6ef642ca6df9a7bf86a0fc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/18fe76f681ddb8efc5cf210ec8a41455b8ebfe.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/18fe76f681ddb8efc5cf210ec8a41455b8ebfe.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/18fe76f681ddb8efc5cf210ec8a41455b8ebfe.debug debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/b96400cdd4c9c21db0b6c1472767a69627e7ca.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/b96400cdd4c9c21db0b6c1472767a69627e7ca.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/b96400cdd4c9c21db0b6c1472767a69627e7ca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/52b40a86dd51ddcfeed8d09208fa71b9718112.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/52b40a86dd51ddcfeed8d09208fa71b9718112.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/52b40a86dd51ddcfeed8d09208fa71b9718112.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/2a514e3af7eba120b63860345873df42a33511.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/2a514e3af7eba120b63860345873df42a33511.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/2a514e3af7eba120b63860345873df42a33511.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/aedde69b49a2f95839003dc3866ba7dc8d1b6b.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/aedde69b49a2f95839003dc3866ba7dc8d1b6b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/aedde69b49a2f95839003dc3866ba7dc8d1b6b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/a831208585baaaee88fe37254fdfa5b3d38ae9.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/a831208585baaaee88fe37254fdfa5b3d38ae9.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/a831208585baaaee88fe37254fdfa5b3d38ae9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9b2290cf824d8837e02c8b64e4a6e0bce16707.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9b2290cf824d8837e02c8b64e4a6e0bce16707.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9b2290cf824d8837e02c8b64e4a6e0bce16707.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/e363c500fb9f152e60218fd533e5372e333e2f.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/e363c500fb9f152e60218fd533e5372e333e2f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/e363c500fb9f152e60218fd533e5372e333e2f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/60669d03e3cdf300cddb521946e42abe56d16a.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/60669d03e3cdf300cddb521946e42abe56d16a.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/60669d03e3cdf300cddb521946e42abe56d16a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/9400c016e669376606f8488fb70e30d157a981.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/9400c016e669376606f8488fb70e30d157a981.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/9400c016e669376606f8488fb70e30d157a981.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/f29e8370a510b52813cce17eaa797ca59a8c8d.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/f29e8370a510b52813cce17eaa797ca59a8c8d.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/f29e8370a510b52813cce17eaa797ca59a8c8d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e0
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e0/faa06ad1954ecaca621cb41cb8d1b12ca19385.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e0/faa06ad1954ecaca621cb41cb8d1b12ca19385.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e0/faa06ad1954ecaca621cb41cb8d1b12ca19385.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/ff8290f134166a078c8e1a30c5ca666e428b0f.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/ff8290f134166a078c8e1a30c5ca666e428b0f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/ff8290f134166a078c8e1a30c5ca666e428b0f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/b00ff63bea70e81794853f7ba6e36ef1341a7f.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/b00ff63bea70e81794853f7ba6e36ef1341a7f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/b00ff63bea70e81794853f7ba6e36ef1341a7f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/3f3f8574074b3a87804b8fc8fdfb480cbd90ef.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/3f3f8574074b3a87804b8fc8fdfb480cbd90ef.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/3f3f8574074b3a87804b8fc8fdfb480cbd90ef.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/b9546bebae815004b166f750b8dc5ca3fc75dc.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/b9546bebae815004b166f750b8dc5ca3fc75dc.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/b9546bebae815004b166f750b8dc5ca3fc75dc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/8715dd8b4a6a991cd56e13f7cb5e47459744ff.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/8715dd8b4a6a991cd56e13f7cb5e47459744ff.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/8715dd8b4a6a991cd56e13f7cb5e47459744ff.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2a194a2c0ecd5117d45a906c93df060110331b.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2a194a2c0ecd5117d45a906c93df060110331b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2a194a2c0ecd5117d45a906c93df060110331b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/2badf3cfb4ec057f47eeda9e8dd32d12e72a77.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/2badf3cfb4ec057f47eeda9e8dd32d12e72a77.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/2badf3cfb4ec057f47eeda9e8dd32d12e72a77.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/6f56f85b2305d538ce42c28ac52196067e8f7c.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/6f56f85b2305d538ce42c28ac52196067e8f7c.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/6f56f85b2305d538ce42c28ac52196067e8f7c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/cb9c76ddc7832cdd6d03f4c1ea7d4896844829.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/cb9c76ddc7832cdd6d03f4c1ea7d4896844829.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/cb9c76ddc7832cdd6d03f4c1ea7d4896844829.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/38ff968198b81be89ac9a2538b6be0a35c3cc7.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/38ff968198b81be89ac9a2538b6be0a35c3cc7.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/38ff968198b81be89ac9a2538b6be0a35c3cc7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/275fa6cca4ad1288f19cdc769fd0f2f4b92e03.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/275fa6cca4ad1288f19cdc769fd0f2f4b92e03.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/275fa6cca4ad1288f19cdc769fd0f2f4b92e03.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/c2a9e2849fc8afaef0a583d5f21a8a1de1482a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/c2a9e2849fc8afaef0a583d5f21a8a1de1482a.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/c2a9e2849fc8afaef0a583d5f21a8a1de1482a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/46eaf173cc4d2b45bcb063608ea93f11abbffb.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/46eaf173cc4d2b45bcb063608ea93f11abbffb.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/46eaf173cc4d2b45bcb063608ea93f11abbffb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/f416a213ab42b958a0674f3d587968af25a7d9.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/f416a213ab42b958a0674f3d587968af25a7d9.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/f416a213ab42b958a0674f3d587968af25a7d9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/c3886dbe228c3faeae147f29204d90cc39d4fc.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/c3886dbe228c3faeae147f29204d90cc39d4fc.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/c3886dbe228c3faeae147f29204d90cc39d4fc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/79a53441022ca0fb7c737951f83f6caa1c4eba.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/79a53441022ca0fb7c737951f83f6caa1c4eba.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/79a53441022ca0fb7c737951f83f6caa1c4eba.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/564800d16eb39028908b473a495151726d11ca.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/564800d16eb39028908b473a495151726d11ca.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/564800d16eb39028908b473a495151726d11ca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/b3c0b2eb7389bf1a0222b5c4f33d29c4759e36.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/b3c0b2eb7389bf1a0222b5c4f33d29c4759e36.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/b3c0b2eb7389bf1a0222b5c4f33d29c4759e36.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/14
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/14/c498e19c975a5ddd3cac21b531507e1feaaebb.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/14/c498e19c975a5ddd3cac21b531507e1feaaebb.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/14/c498e19c975a5ddd3cac21b531507e1feaaebb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/8975d01e1be7513882242364b29a796e955f2b.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/8975d01e1be7513882242364b29a796e955f2b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/8975d01e1be7513882242364b29a796e955f2b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/e80be1a8346e7ff78955856f455346b58824e0.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/e80be1a8346e7ff78955856f455346b58824e0.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/e80be1a8346e7ff78955856f455346b58824e0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/9400c016e669376606f8488fb70e30d157a981.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/9400c016e669376606f8488fb70e30d157a981.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/9400c016e669376606f8488fb70e30d157a981.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e792fc4be04ed19c77a851c92450fbcc5ed85a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e792fc4be04ed19c77a851c92450fbcc5ed85a.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e792fc4be04ed19c77a851c92450fbcc5ed85a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/424ec1b4f5f97bcc28b7bfd7c6a2199fd3c32e.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/424ec1b4f5f97bcc28b7bfd7c6a2199fd3c32e.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/424ec1b4f5f97bcc28b7bfd7c6a2199fd3c32e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/ccebdadbb02b966f674e4c93454e6bd84628cf.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/ccebdadbb02b966f674e4c93454e6bd84628cf.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/ccebdadbb02b966f674e4c93454e6bd84628cf.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/b79aaecff27cdd25325b3072e6353695204754.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/b79aaecff27cdd25325b3072e6353695204754.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/b79aaecff27cdd25325b3072e6353695204754.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/bc79d35969e9b5d2adb51c043be626283fee99.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/bc79d35969e9b5d2adb51c043be626283fee99.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/bc79d35969e9b5d2adb51c043be626283fee99.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/26ce632960af4d4362ea13fb8417e21280b598.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/26ce632960af4d4362ea13fb8417e21280b598.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/26ce632960af4d4362ea13fb8417e21280b598.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/35bb8b619dc11597a83cdb47292dad42463901.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/35bb8b619dc11597a83cdb47292dad42463901.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/35bb8b619dc11597a83cdb47292dad42463901.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/a11e8feca49eecfdd809803faf6383760f0551.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/a11e8feca49eecfdd809803faf6383760f0551.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/a11e8feca49eecfdd809803faf6383760f0551.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/7b81a0e9f7ffc84bc2144e69d71712c96804a1.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/7b81a0e9f7ffc84bc2144e69d71712c96804a1.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/7b81a0e9f7ffc84bc2144e69d71712c96804a1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/b9546bebae815004b166f750b8dc5ca3fc75dc.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/b9546bebae815004b166f750b8dc5ca3fc75dc.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/b9546bebae815004b166f750b8dc5ca3fc75dc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/5e0da477482b768238768c98bdf191fa13b5b0.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/5e0da477482b768238768c98bdf191fa13b5b0.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/5e0da477482b768238768c98bdf191fa13b5b0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/65c8185f58bddedcdfe8935c79a5e3099cac3a.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/65c8185f58bddedcdfe8935c79a5e3099cac3a.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/65c8185f58bddedcdfe8935c79a5e3099cac3a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/3acd67df3349e7f163609998832e2a7e9ff3b6.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/3acd67df3349e7f163609998832e2a7e9ff3b6.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/3acd67df3349e7f163609998832e2a7e9ff3b6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/b99fec1ce4a26a4956777fbff25ec5ebc45655.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/b99fec1ce4a26a4956777fbff25ec5ebc45655.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/b99fec1ce4a26a4956777fbff25ec5ebc45655.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/e0213a16c9e4e5edee90d2171aa39b297ce144.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/e0213a16c9e4e5edee90d2171aa39b297ce144.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/e0213a16c9e4e5edee90d2171aa39b297ce144.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/5211efd5ef83c0f2a216855bcf5aa2f74374fc.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/5211efd5ef83c0f2a216855bcf5aa2f74374fc.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/5211efd5ef83c0f2a216855bcf5aa2f74374fc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/dde8f2940f3c72fa72e887c1a1ed41e46671f4.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/dde8f2940f3c72fa72e887c1a1ed41e46671f4.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/dde8f2940f3c72fa72e887c1a1ed41e46671f4.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/09788a1add5217f976952e99a48a6b552113a7.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/09788a1add5217f976952e99a48a6b552113a7.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/09788a1add5217f976952e99a48a6b552113a7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/18fe76f681ddb8efc5cf210ec8a41455b8ebfe.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/18fe76f681ddb8efc5cf210ec8a41455b8ebfe.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/18fe76f681ddb8efc5cf210ec8a41455b8ebfe.debug debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/da
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/da/9d89b7d5807aed76e424d446d7a0db9da76c64.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/da/9d89b7d5807aed76e424d446d7a0db9da76c64.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/da/9d89b7d5807aed76e424d446d7a0db9da76c64.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/4a4afc2f1a1896d4227ab465197ed59075f932.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/4a4afc2f1a1896d4227ab465197ed59075f932.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/4a4afc2f1a1896d4227ab465197ed59075f932.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/38
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/38/f705365f704ce687b8e6811726cedab82b607a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/38/f705365f704ce687b8e6811726cedab82b607a.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/38/f705365f704ce687b8e6811726cedab82b607a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/ad2221eba51201787bd4e6ff2241b038d36c1f.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/ad2221eba51201787bd4e6ff2241b038d36c1f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/ad2221eba51201787bd4e6ff2241b038d36c1f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/f40d77549b3bdadb0e6ca2513e7c9b076561c8.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/f40d77549b3bdadb0e6ca2513e7c9b076561c8.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/f40d77549b3bdadb0e6ca2513e7c9b076561c8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/cd76170cc52e04a6f0c9b383735c85dacb6d2a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/cd76170cc52e04a6f0c9b383735c85dacb6d2a.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/cd76170cc52e04a6f0c9b383735c85dacb6d2a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/bd57d51e76974d26362b867c16c96e5221b8cb.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/bd57d51e76974d26362b867c16c96e5221b8cb.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/bd57d51e76974d26362b867c16c96e5221b8cb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e082b9765fa666cf54ece4c69f796cdde51fc9.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e082b9765fa666cf54ece4c69f796cdde51fc9.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e082b9765fa666cf54ece4c69f796cdde51fc9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/f416a213ab42b958a0674f3d587968af25a7d9.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/f416a213ab42b958a0674f3d587968af25a7d9.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/f416a213ab42b958a0674f3d587968af25a7d9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/cb9c76ddc7832cdd6d03f4c1ea7d4896844829.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/cb9c76ddc7832cdd6d03f4c1ea7d4896844829.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/cb9c76ddc7832cdd6d03f4c1ea7d4896844829.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/14c74c2295ddd21b93a8d94891087564e21f96.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/14c74c2295ddd21b93a8d94891087564e21f96.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/14c74c2295ddd21b93a8d94891087564e21f96.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/c3886dbe228c3faeae147f29204d90cc39d4fc.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/c3886dbe228c3faeae147f29204d90cc39d4fc.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/c3886dbe228c3faeae147f29204d90cc39d4fc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/701b503c6af55982902d6f51f2de46e406b46d.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/701b503c6af55982902d6f51f2de46e406b46d.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/701b503c6af55982902d6f51f2de46e406b46d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/f6f3eaf765acf4b1d189aad61f627a1614b665.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/f6f3eaf765acf4b1d189aad61f627a1614b665.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/f6f3eaf765acf4b1d189aad61f627a1614b665.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/7adc1849ca2e81c566ec5367dccdd77bd7c2f3.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/7adc1849ca2e81c566ec5367dccdd77bd7c2f3.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/7adc1849ca2e81c566ec5367dccdd77bd7c2f3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/31a25060d74902d4763e4930aba47d31b197fa.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/31a25060d74902d4763e4930aba47d31b197fa.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/31a25060d74902d4763e4930aba47d31b197fa.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/6df91aa602cf84dd6ef642ca6df9a7bf86a0fc.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/6df91aa602cf84dd6ef642ca6df9a7bf86a0fc.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/6df91aa602cf84dd6ef642ca6df9a7bf86a0fc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/b96400cdd4c9c21db0b6c1472767a69627e7ca.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/b96400cdd4c9c21db0b6c1472767a69627e7ca.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/b96400cdd4c9c21db0b6c1472767a69627e7ca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/faa2f4a217024c8778008ff8334956be904913.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/faa2f4a217024c8778008ff8334956be904913.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/faa2f4a217024c8778008ff8334956be904913.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/5549ac230ddacee72a642f183094e3fe3afd9f.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/5549ac230ddacee72a642f183094e3fe3afd9f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/5549ac230ddacee72a642f183094e3fe3afd9f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/793e175dcef9c4b32200dcba6064e93166fc15.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/793e175dcef9c4b32200dcba6064e93166fc15.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/793e175dcef9c4b32200dcba6064e93166fc15.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/11bce9d64e4ffe59c0b022fe2530416ff2245c.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/11bce9d64e4ffe59c0b022fe2530416ff2245c.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/11bce9d64e4ffe59c0b022fe2530416ff2245c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/ad3ea7290c0a3926b21adb3b3cf4dc073ee2fb.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/ad3ea7290c0a3926b21adb3b3cf4dc073ee2fb.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/ad3ea7290c0a3926b21adb3b3cf4dc073ee2fb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/ed74750a75c88ac7e17724558b8442e0199389.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/ed74750a75c88ac7e17724558b8442e0199389.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/ed74750a75c88ac7e17724558b8442e0199389.debug debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/14c74c2295ddd21b93a8d94891087564e21f96.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/14c74c2295ddd21b93a8d94891087564e21f96.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/14c74c2295ddd21b93a8d94891087564e21f96.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/00a1d9ba84f895beaaa1bb7f28cd4d30416d30.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/00a1d9ba84f895beaaa1bb7f28cd4d30416d30.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/00a1d9ba84f895beaaa1bb7f28cd4d30416d30.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/4b972959cf569340c7e66be0f2d0692605dd15.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/4b972959cf569340c7e66be0f2d0692605dd15.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/4b972959cf569340c7e66be0f2d0692605dd15.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/83eddd96f0a1e645ea1e4d301518b1918610c5.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/83eddd96f0a1e645ea1e4d301518b1918610c5.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/83eddd96f0a1e645ea1e4d301518b1918610c5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/a85996f6f5f668df1ed5591ff141c4654b113b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/a85996f6f5f668df1ed5591ff141c4654b113b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/a85996f6f5f668df1ed5591ff141c4654b113b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/c14ddc21a4d2a2b3ec2eea0317f6121381fce8.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/c14ddc21a4d2a2b3ec2eea0317f6121381fce8.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/c14ddc21a4d2a2b3ec2eea0317f6121381fce8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/09788a1add5217f976952e99a48a6b552113a7.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/09788a1add5217f976952e99a48a6b552113a7.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/09788a1add5217f976952e99a48a6b552113a7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/c1143a09d1e1b74d14c756f063b9f9dccf7593.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/c1143a09d1e1b74d14c756f063b9f9dccf7593.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/c1143a09d1e1b74d14c756f063b9f9dccf7593.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e792fc4be04ed19c77a851c92450fbcc5ed85a.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e792fc4be04ed19c77a851c92450fbcc5ed85a.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e792fc4be04ed19c77a851c92450fbcc5ed85a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/ee4bcfd96c847a1a69b2c2bebb939fed4e9ccf.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/ee4bcfd96c847a1a69b2c2bebb939fed4e9ccf.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/ee4bcfd96c847a1a69b2c2bebb939fed4e9ccf.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f3
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f3/7345c223c591ad19904bb7dc6920de25dff2a7.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f3/7345c223c591ad19904bb7dc6920de25dff2a7.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f3/7345c223c591ad19904bb7dc6920de25dff2a7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ce
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ce/8032ca2d3a0734ea3c1047e2f1be7c6930505b.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ce/8032ca2d3a0734ea3c1047e2f1be7c6930505b.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ce/8032ca2d3a0734ea3c1047e2f1be7c6930505b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/fc3274f0cb260c070f0a1ec9d2044981d5e13e.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/fc3274f0cb260c070f0a1ec9d2044981d5e13e.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/fc3274f0cb260c070f0a1ec9d2044981d5e13e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0838f779054aa294a97529aa96a723e65e8d35.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0838f779054aa294a97529aa96a723e65e8d35.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0838f779054aa294a97529aa96a723e65e8d35.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/f2d110947ec73aba311048f1759d768855a7c1.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/f2d110947ec73aba311048f1759d768855a7c1.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/f2d110947ec73aba311048f1759d768855a7c1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/77db996deffe0edef0a591f936b4d39fc25f69.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/77db996deffe0edef0a591f936b4d39fc25f69.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/77db996deffe0edef0a591f936b4d39fc25f69.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/d5eab4b9e9fb75aa2dd3e23c1467380e319911.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/d5eab4b9e9fb75aa2dd3e23c1467380e319911.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/d5eab4b9e9fb75aa2dd3e23c1467380e319911.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/cfe6f8af238d870592e9c25d66676da57f9165.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/cfe6f8af238d870592e9c25d66676da57f9165.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/cfe6f8af238d870592e9c25d66676da57f9165.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/26ce632960af4d4362ea13fb8417e21280b598.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/26ce632960af4d4362ea13fb8417e21280b598.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/26ce632960af4d4362ea13fb8417e21280b598.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/7b81a0e9f7ffc84bc2144e69d71712c96804a1.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/7b81a0e9f7ffc84bc2144e69d71712c96804a1.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/7b81a0e9f7ffc84bc2144e69d71712c96804a1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/b99b46515d73ae5035be4c759cd19fb5c09e94.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/b99b46515d73ae5035be4c759cd19fb5c09e94.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/b99b46515d73ae5035be4c759cd19fb5c09e94.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/4b10bc75641c8d06eeb599ba09b03231e23b24.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/4b10bc75641c8d06eeb599ba09b03231e23b24.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/4b10bc75641c8d06eeb599ba09b03231e23b24.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/66
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/66/de1b6b506db4eb92c7ea11fb33d48fc2e20222.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/66/de1b6b506db4eb92c7ea11fb33d48fc2e20222.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/66/de1b6b506db4eb92c7ea11fb33d48fc2e20222.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/00a1d9ba84f895beaaa1bb7f28cd4d30416d30.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/00a1d9ba84f895beaaa1bb7f28cd4d30416d30.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/00a1d9ba84f895beaaa1bb7f28cd4d30416d30.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8cf2505fc360a32e000fbe2ebe4691d56fe014.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8cf2505fc360a32e000fbe2ebe4691d56fe014.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8cf2505fc360a32e000fbe2ebe4691d56fe014.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8911080f5ee5b6943fa363fe67f0b4ad76eac5.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8911080f5ee5b6943fa363fe67f0b4ad76eac5.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8911080f5ee5b6943fa363fe67f0b4ad76eac5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/14ee787c5b920fcd2a318b5bcb12dd09954fcb.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/14ee787c5b920fcd2a318b5bcb12dd09954fcb.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/14ee787c5b920fcd2a318b5bcb12dd09954fcb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/dde8f2940f3c72fa72e887c1a1ed41e46671f4.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/dde8f2940f3c72fa72e887c1a1ed41e46671f4.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/dde8f2940f3c72fa72e887c1a1ed41e46671f4.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/a831208585baaaee88fe37254fdfa5b3d38ae9.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/a831208585baaaee88fe37254fdfa5b3d38ae9.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/a831208585baaaee88fe37254fdfa5b3d38ae9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/6a047cb94ef45c0f5a175e999ad7ee6d1a3ca2.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/6a047cb94ef45c0f5a175e999ad7ee6d1a3ca2.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/6a047cb94ef45c0f5a175e999ad7ee6d1a3ca2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/b461dae722daa0cff80819f9f89c13ba37d281.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/b461dae722daa0cff80819f9f89c13ba37d281.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/b461dae722daa0cff80819f9f89c13ba37d281.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/5c3b615a1a71e68982cc3aff4d66a13ce44aa6.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/5c3b615a1a71e68982cc3aff4d66a13ce44aa6.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/5c3b615a1a71e68982cc3aff4d66a13ce44aa6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/6703a7c8559a679dd0b966dd55bf7807fc40bb.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/6703a7c8559a679dd0b966dd55bf7807fc40bb.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/6703a7c8559a679dd0b966dd55bf7807fc40bb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/60669d03e3cdf300cddb521946e42abe56d16a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/60669d03e3cdf300cddb521946e42abe56d16a.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/60669d03e3cdf300cddb521946e42abe56d16a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/4b10bc75641c8d06eeb599ba09b03231e23b24.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/4b10bc75641c8d06eeb599ba09b03231e23b24.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/4b10bc75641c8d06eeb599ba09b03231e23b24.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/4b972959cf569340c7e66be0f2d0692605dd15.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/4b972959cf569340c7e66be0f2d0692605dd15.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/4b972959cf569340c7e66be0f2d0692605dd15.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/3e36a79552675417dea5fce4d93700716d1881.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/3e36a79552675417dea5fce4d93700716d1881.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/3e36a79552675417dea5fce4d93700716d1881.debug debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/ed91f3596cc5e63e26ef35da968136e788f7c7.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/ed91f3596cc5e63e26ef35da968136e788f7c7.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/ed91f3596cc5e63e26ef35da968136e788f7c7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/f6f3eaf765acf4b1d189aad61f627a1614b665.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/f6f3eaf765acf4b1d189aad61f627a1614b665.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/f6f3eaf765acf4b1d189aad61f627a1614b665.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/9f9750350895283ed2e4aa3e0a907364ee915a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/9f9750350895283ed2e4aa3e0a907364ee915a.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/9f9750350895283ed2e4aa3e0a907364ee915a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/261f93771cfd13195debb332ff3e61637c7960.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/261f93771cfd13195debb332ff3e61637c7960.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/261f93771cfd13195debb332ff3e61637c7960.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/3a9ca53b7f8bc50cb51e938ad5fb57feee9b33.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/3a9ca53b7f8bc50cb51e938ad5fb57feee9b33.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/3a9ca53b7f8bc50cb51e938ad5fb57feee9b33.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/38
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/38/f705365f704ce687b8e6811726cedab82b607a.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/38/f705365f704ce687b8e6811726cedab82b607a.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/38/f705365f704ce687b8e6811726cedab82b607a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/7fcff47b45c7005bbd2dc276f86713134fbe4d.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/7fcff47b45c7005bbd2dc276f86713134fbe4d.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/7fcff47b45c7005bbd2dc276f86713134fbe4d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/eaed8e6a9b7f210f5cb400423832dfa039b8fb.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/eaed8e6a9b7f210f5cb400423832dfa039b8fb.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e2/eaed8e6a9b7f210f5cb400423832dfa039b8fb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a53107a8c8c0205970162f00792f28cfdf8a8d.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a53107a8c8c0205970162f00792f28cfdf8a8d.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a53107a8c8c0205970162f00792f28cfdf8a8d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/e80be1a8346e7ff78955856f455346b58824e0.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/e80be1a8346e7ff78955856f455346b58824e0.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/e80be1a8346e7ff78955856f455346b58824e0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/fb346182bff20c9ff10c55bb9cbca692b488b7.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/fb346182bff20c9ff10c55bb9cbca692b488b7.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/fb346182bff20c9ff10c55bb9cbca692b488b7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e082b9765fa666cf54ece4c69f796cdde51fc9.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e082b9765fa666cf54ece4c69f796cdde51fc9.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e082b9765fa666cf54ece4c69f796cdde51fc9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d5e266ce732b727090117a86104c8fc307ef73.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d5e266ce732b727090117a86104c8fc307ef73.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d5e266ce732b727090117a86104c8fc307ef73.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/36c27299c4d191c3a9177fa4e9ed262c723a96.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/36c27299c4d191c3a9177fa4e9ed262c723a96.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/36c27299c4d191c3a9177fa4e9ed262c723a96.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/e4c1ba799eea1cf2aded0f76cb596b6d7d82da.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/e4c1ba799eea1cf2aded0f76cb596b6d7d82da.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/e4c1ba799eea1cf2aded0f76cb596b6d7d82da.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/f6a482f01b788f17164c79e3868151469ce07f.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/f6a482f01b788f17164c79e3868151469ce07f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/f6a482f01b788f17164c79e3868151469ce07f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/8ea428b700b003727faae1c375d251b4d464aa.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/8ea428b700b003727faae1c375d251b4d464aa.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/8ea428b700b003727faae1c375d251b4d464aa.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/b31eb83709eed7c287dbbb26a6a1886ab3786d.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/b31eb83709eed7c287dbbb26a6a1886ab3786d.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/b31eb83709eed7c287dbbb26a6a1886ab3786d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/ed74750a75c88ac7e17724558b8442e0199389.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/ed74750a75c88ac7e17724558b8442e0199389.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/ed74750a75c88ac7e17724558b8442e0199389.debug debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/e7b80af8cd1c0513a05eebf00b37c73f108c52.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/e7b80af8cd1c0513a05eebf00b37c73f108c52.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/e7b80af8cd1c0513a05eebf00b37c73f108c52.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/a157c21b9930822f0e86081fa4fcf1b3abc212.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/a157c21b9930822f0e86081fa4fcf1b3abc212.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/a157c21b9930822f0e86081fa4fcf1b3abc212.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/f40d77549b3bdadb0e6ca2513e7c9b076561c8.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/f40d77549b3bdadb0e6ca2513e7c9b076561c8.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/f40d77549b3bdadb0e6ca2513e7c9b076561c8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/e1218d8e8e9783af83fe6e7ef2b3339f93d7de.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/e1218d8e8e9783af83fe6e7ef2b3339f93d7de.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/e1218d8e8e9783af83fe6e7ef2b3339f93d7de.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/1396331f8b5707b63763f6509eb1b077c85589.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/1396331f8b5707b63763f6509eb1b077c85589.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/1396331f8b5707b63763f6509eb1b077c85589.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/aedde69b49a2f95839003dc3866ba7dc8d1b6b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/aedde69b49a2f95839003dc3866ba7dc8d1b6b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/aedde69b49a2f95839003dc3866ba7dc8d1b6b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/2a514e3af7eba120b63860345873df42a33511.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/2a514e3af7eba120b63860345873df42a33511.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/2a514e3af7eba120b63860345873df42a33511.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/9a11e923ff41c42664549da9cf51d3980c8d2b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/9a11e923ff41c42664549da9cf51d3980c8d2b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/9a11e923ff41c42664549da9cf51d3980c8d2b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/ad3ea7290c0a3926b21adb3b3cf4dc073ee2fb.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/ad3ea7290c0a3926b21adb3b3cf4dc073ee2fb.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/ad3ea7290c0a3926b21adb3b3cf4dc073ee2fb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/ccebdadbb02b966f674e4c93454e6bd84628cf.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/ccebdadbb02b966f674e4c93454e6bd84628cf.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/ccebdadbb02b966f674e4c93454e6bd84628cf.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0826e74cdf9f457dc6c526abbfa2bae01ccb71.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0826e74cdf9f457dc6c526abbfa2bae01ccb71.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0826e74cdf9f457dc6c526abbfa2bae01ccb71.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/9732b660416bf8e530d096c1010fe51b9355bc.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/9732b660416bf8e530d096c1010fe51b9355bc.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/9732b660416bf8e530d096c1010fe51b9355bc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/486bd264c85ee371b89c4f870cabc8c0523c56.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/486bd264c85ee371b89c4f870cabc8c0523c56.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/486bd264c85ee371b89c4f870cabc8c0523c56.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/953ce1a11e9c7656ca0fc5e2c62fdda240d70a.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/953ce1a11e9c7656ca0fc5e2c62fdda240d70a.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/953ce1a11e9c7656ca0fc5e2c62fdda240d70a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/ad2221eba51201787bd4e6ff2241b038d36c1f.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/ad2221eba51201787bd4e6ff2241b038d36c1f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/ad2221eba51201787bd4e6ff2241b038d36c1f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/4cd5aaea1b1982d6cc9efef96020a3bed5b44f.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/4cd5aaea1b1982d6cc9efef96020a3bed5b44f.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/4cd5aaea1b1982d6cc9efef96020a3bed5b44f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/80d93e8788bbe9ee891de5a5726b8ddb067185.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/80d93e8788bbe9ee891de5a5726b8ddb067185.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/80d93e8788bbe9ee891de5a5726b8ddb067185.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/0a69d11a709846bdb08e663a002b025e97b020.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/0a69d11a709846bdb08e663a002b025e97b020.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/0a69d11a709846bdb08e663a002b025e97b020.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ad6f0364b818436fab4fb33fa4474136fdc691.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ad6f0364b818436fab4fb33fa4474136fdc691.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ad6f0364b818436fab4fb33fa4474136fdc691.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/c2a9e2849fc8afaef0a583d5f21a8a1de1482a.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/c2a9e2849fc8afaef0a583d5f21a8a1de1482a.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/c2a9e2849fc8afaef0a583d5f21a8a1de1482a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/ecfadd0f5ad6066c936ff1c365bcfcc04c79bb.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/ecfadd0f5ad6066c936ff1c365bcfcc04c79bb.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/ecfadd0f5ad6066c936ff1c365bcfcc04c79bb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/e94d532584dff4c160382a947563e2ba489510.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/e94d532584dff4c160382a947563e2ba489510.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/e94d532584dff4c160382a947563e2ba489510.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/06b31b834ed1c0cde3ed66bd733067172a4b5b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/06b31b834ed1c0cde3ed66bd733067172a4b5b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/06b31b834ed1c0cde3ed66bd733067172a4b5b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/3f3f8574074b3a87804b8fc8fdfb480cbd90ef.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/3f3f8574074b3a87804b8fc8fdfb480cbd90ef.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/3f3f8574074b3a87804b8fc8fdfb480cbd90ef.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/b31eb83709eed7c287dbbb26a6a1886ab3786d.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/b31eb83709eed7c287dbbb26a6a1886ab3786d.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/b31eb83709eed7c287dbbb26a6a1886ab3786d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/1120436ecdca9927199af2d3aeadd33d43f65e.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/1120436ecdca9927199af2d3aeadd33d43f65e.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/1120436ecdca9927199af2d3aeadd33d43f65e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/a1b4b2d5d59a2c7ab7272b773addbb42851e71.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/a1b4b2d5d59a2c7ab7272b773addbb42851e71.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/a1b4b2d5d59a2c7ab7272b773addbb42851e71.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/99e48331515c2dfaee1e16397cdb3a92dad00f.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/99e48331515c2dfaee1e16397cdb3a92dad00f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/99e48331515c2dfaee1e16397cdb3a92dad00f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/b99fec1ce4a26a4956777fbff25ec5ebc45655.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/b99fec1ce4a26a4956777fbff25ec5ebc45655.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/b99fec1ce4a26a4956777fbff25ec5ebc45655.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/ed91f3596cc5e63e26ef35da968136e788f7c7.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/ed91f3596cc5e63e26ef35da968136e788f7c7.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/ed91f3596cc5e63e26ef35da968136e788f7c7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/b00ff63bea70e81794853f7ba6e36ef1341a7f.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/b00ff63bea70e81794853f7ba6e36ef1341a7f.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/b00ff63bea70e81794853f7ba6e36ef1341a7f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/5211efd5ef83c0f2a216855bcf5aa2f74374fc.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/5211efd5ef83c0f2a216855bcf5aa2f74374fc.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/5211efd5ef83c0f2a216855bcf5aa2f74374fc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/46eaf173cc4d2b45bcb063608ea93f11abbffb.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/46eaf173cc4d2b45bcb063608ea93f11abbffb.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/46eaf173cc4d2b45bcb063608ea93f11abbffb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/6703a7c8559a679dd0b966dd55bf7807fc40bb.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/6703a7c8559a679dd0b966dd55bf7807fc40bb.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/6703a7c8559a679dd0b966dd55bf7807fc40bb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/ab3f2378df6f73513f576d4d4600ecf310d8a9.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/ab3f2378df6f73513f576d4d4600ecf310d8a9.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/ab3f2378df6f73513f576d4d4600ecf310d8a9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/11c9b655f1558082e8de88071fe9da146a94e7.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/11c9b655f1558082e8de88071fe9da146a94e7.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/11c9b655f1558082e8de88071fe9da146a94e7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/94
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/94/5744ce8e135e95d2c1c02e94f3b6985e4edf9c.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/94/5744ce8e135e95d2c1c02e94f3b6985e4edf9c.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/94/5744ce8e135e95d2c1c02e94f3b6985e4edf9c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/79a53441022ca0fb7c737951f83f6caa1c4eba.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/79a53441022ca0fb7c737951f83f6caa1c4eba.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/79a53441022ca0fb7c737951f83f6caa1c4eba.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/a657af3eebe71f65a21832d204eeb1de1033b7.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/a657af3eebe71f65a21832d204eeb1de1033b7.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/a657af3eebe71f65a21832d204eeb1de1033b7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/aad590fa945fd4ea77238503d60d2495a60a94.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/aad590fa945fd4ea77238503d60d2495a60a94.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/aad590fa945fd4ea77238503d60d2495a60a94.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/f6a482f01b788f17164c79e3868151469ce07f.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/f6a482f01b788f17164c79e3868151469ce07f.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/f6a482f01b788f17164c79e3868151469ce07f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/262a6fe0ccf1442818186433748b8d2685aa79.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/262a6fe0ccf1442818186433748b8d2685aa79.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/262a6fe0ccf1442818186433748b8d2685aa79.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/3acd67df3349e7f163609998832e2a7e9ff3b6.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/3acd67df3349e7f163609998832e2a7e9ff3b6.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/3acd67df3349e7f163609998832e2a7e9ff3b6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/8715dd8b4a6a991cd56e13f7cb5e47459744ff.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/8715dd8b4a6a991cd56e13f7cb5e47459744ff.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/8715dd8b4a6a991cd56e13f7cb5e47459744ff.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/377cf8c7a389446d0b7a6104d1ef6630c2f1a3.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/377cf8c7a389446d0b7a6104d1ef6630c2f1a3.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/377cf8c7a389446d0b7a6104d1ef6630c2f1a3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/b99b46515d73ae5035be4c759cd19fb5c09e94.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/b99b46515d73ae5035be4c759cd19fb5c09e94.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/b99b46515d73ae5035be4c759cd19fb5c09e94.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0f3b25ac7067db90727695c97be1c9a516e0bc.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0f3b25ac7067db90727695c97be1c9a516e0bc.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0f3b25ac7067db90727695c97be1c9a516e0bc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/51caafcdae65998c0d8b638fc2dfb7aa236866.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/51caafcdae65998c0d8b638fc2dfb7aa236866.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/51caafcdae65998c0d8b638fc2dfb7aa236866.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/6da9f62f00b56978882d1682e091f80f0db888.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/6da9f62f00b56978882d1682e091f80f0db888.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/6da9f62f00b56978882d1682e091f80f0db888.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/43d95631e03f416cd052dd94d8bdf3148e6409.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/43d95631e03f416cd052dd94d8bdf3148e6409.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/43d95631e03f416cd052dd94d8bdf3148e6409.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2a194a2c0ecd5117d45a906c93df060110331b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2a194a2c0ecd5117d45a906c93df060110331b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2a194a2c0ecd5117d45a906c93df060110331b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/3954791df97225f6569b56a85fd8aeef9d610e.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/3954791df97225f6569b56a85fd8aeef9d610e.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/3954791df97225f6569b56a85fd8aeef9d610e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/6f56f85b2305d538ce42c28ac52196067e8f7c.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/6f56f85b2305d538ce42c28ac52196067e8f7c.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/6f56f85b2305d538ce42c28ac52196067e8f7c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/83eddd96f0a1e645ea1e4d301518b1918610c5.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/83eddd96f0a1e645ea1e4d301518b1918610c5.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/83eddd96f0a1e645ea1e4d301518b1918610c5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/80c13525f1b7313a6ed1915401365dd05dae7c.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/80c13525f1b7313a6ed1915401365dd05dae7c.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/80c13525f1b7313a6ed1915401365dd05dae7c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/701b503c6af55982902d6f51f2de46e406b46d.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/701b503c6af55982902d6f51f2de46e406b46d.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/701b503c6af55982902d6f51f2de46e406b46d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f3fd203e9d2e3dd56fc5705026aa8699e590c9.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f3fd203e9d2e3dd56fc5705026aa8699e590c9.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f3fd203e9d2e3dd56fc5705026aa8699e590c9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/bc79d35969e9b5d2adb51c043be626283fee99.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/bc79d35969e9b5d2adb51c043be626283fee99.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/bc79d35969e9b5d2adb51c043be626283fee99.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/6dc48704cafb8789cf9085531843f9cdd5831b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/6dc48704cafb8789cf9085531843f9cdd5831b.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1a/6dc48704cafb8789cf9085531843f9cdd5831b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/cc667e4d467af722d175bf4d47013c881d78db.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/cc667e4d467af722d175bf4d47013c881d78db.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/cc667e4d467af722d175bf4d47013c881d78db.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/cc7959eb21798b0c6403ef6113a3d7ef69d0f6.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/cc7959eb21798b0c6403ef6113a3d7ef69d0f6.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/cc7959eb21798b0c6403ef6113a3d7ef69d0f6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e5
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e5/abfdfb842e50d22f753b8752f4d42b2b6669f0.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e5/abfdfb842e50d22f753b8752f4d42b2b6669f0.debug
 	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e5/abfdfb842e50d22f753b8752f4d42b2b6669f0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0826e74cdf9f457dc6c526abbfa2bae01ccb71.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0826e74cdf9f457dc6c526abbfa2bae01ccb71.debug
-	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/0826e74cdf9f457dc6c526abbfa2bae01ccb71.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/0695972152743ef620da795d41b8b365e0d9de.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/0695972152743ef620da795d41b8b365e0d9de.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/0695972152743ef620da795d41b8b365e0d9de.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/e57f229ed20a727ddc43f18ad9b63cb7b731b8.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/e57f229ed20a727ddc43f18ad9b63cb7b731b8.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/e57f229ed20a727ddc43f18ad9b63cb7b731b8.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/3d48b0e9408e66262530a8f33fc0a4d547e955.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/3d48b0e9408e66262530a8f33fc0a4d547e955.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/3d48b0e9408e66262530a8f33fc0a4d547e955.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f5904f86af42f6e94d55583816ee9d30fe933c.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f5904f86af42f6e94d55583816ee9d30fe933c.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f5904f86af42f6e94d55583816ee9d30fe933c.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/448724a7a8ee985f158f2f70f7e23a69e57d28.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/448724a7a8ee985f158f2f70f7e23a69e57d28.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/448724a7a8ee985f158f2f70f7e23a69e57d28.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/3748c6c238002807d2170263c9bc4838bb9df4.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/3748c6c238002807d2170263c9bc4838bb9df4.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/3748c6c238002807d2170263c9bc4838bb9df4.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/36c27299c4d191c3a9177fa4e9ed262c723a96.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/36c27299c4d191c3a9177fa4e9ed262c723a96.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/36c27299c4d191c3a9177fa4e9ed262c723a96.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/6e075dffd22ca747eecf1760a2e2f9bbc93ed6.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/6e075dffd22ca747eecf1760a2e2f9bbc93ed6.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/6e075dffd22ca747eecf1760a2e2f9bbc93ed6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/80c13525f1b7313a6ed1915401365dd05dae7c.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/80c13525f1b7313a6ed1915401365dd05dae7c.debug
+	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/80c13525f1b7313a6ed1915401365dd05dae7c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6f
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6f/a53f638d8803a1b4f094d310b3cbf3f3264be1.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6f/a53f638d8803a1b4f094d310b3cbf3f3264be1.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6f/a53f638d8803a1b4f094d310b3cbf3f3264be1.debug debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/f4911a70fdaceeda0ace8bc17fd2b4e56b3be0.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/f4911a70fdaceeda0ace8bc17fd2b4e56b3be0.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/f4911a70fdaceeda0ace8bc17fd2b4e56b3be0.debug debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.getting_started debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/756af332257632f65aef4388b557d7c58b01d3.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/756af332257632f65aef4388b557d7c58b01d3.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.getting_started
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/756af332257632f65aef4388b557d7c58b01d3.debug debian/python3-cctbx/usr/bin/cctbx.getting_started
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.find_distances debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/6140b3981ca232c7110e2ef88a45daed32d221.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/6140b3981ca232c7110e2ef88a45daed32d221.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.find_distances
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/6140b3981ca232c7110e2ef88a45daed32d221.debug debian/python3-cctbx/usr/bin/cctbx.find_distances
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/1140c85abe26599c84926bbe66db6f5ef393e0.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/1140c85abe26599c84926bbe66db6f5ef393e0.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/1140c85abe26599c84926bbe66db6f5ef393e0.debug debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/b2b39807997e5b94d075d8cccfb0cd190ec53d.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/b2b39807997e5b94d075d8cccfb0cd190ec53d.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/b2b39807997e5b94d075d8cccfb0cd190ec53d.debug debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx_blobs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/cb10ba0ca8e8a204ef6a20962b375423fa4be6.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/cb10ba0ca8e8a204ef6a20962b375423fa4be6.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx_blobs
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/cb10ba0ca8e8a204ef6a20962b375423fa4be6.debug debian/python3-cctbx/usr/bin/cctbx_blobs
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/73dbc56660e4f0b3d6b907f0bddd5cdf336822.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/73dbc56660e4f0b3d6b907f0bddd5cdf336822.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cbflib.tst_memory
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/73dbc56660e4f0b3d6b907f0bddd5cdf336822.debug debian/python3-cctbx/usr/bin/cbflib.tst_memory
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/1ef0e564f288853e2268fa2d6fe872df6c464c.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/1ef0e564f288853e2268fa2d6fe872df6c464c.debug
 	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/1ef0e564f288853e2268fa2d6fe872df6c464c.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/fe985a2df07ea4c734f23516ddc41b478bd475.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/fe985a2df07ea4c734f23516ddc41b478bd475.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/fe985a2df07ea4c734f23516ddc41b478bd475.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/bad405b0c0a48f07984023049db016f4a0d050.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/bad405b0c0a48f07984023049db016f4a0d050.debug
 	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/bad405b0c0a48f07984023049db016f4a0d050.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/88cec3bffdcd2f0965654850022f3a67f856d1.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/88cec3bffdcd2f0965654850022f3a67f856d1.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/88cec3bffdcd2f0965654850022f3a67f856d1.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e45f95fa13768c65999b6845072dfa89635d42.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e45f95fa13768c65999b6845072dfa89635d42.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e45f95fa13768c65999b6845072dfa89635d42.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/8fa1bca49fb83ddf841fc12fa8f033a9ecd347.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/8fa1bca49fb83ddf841fc12fa8f033a9ecd347.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/8fa1bca49fb83ddf841fc12fa8f033a9ecd347.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/9ae8c9ba1bae216a5598fa2edb51948e9320f9.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/9ae8c9ba1bae216a5598fa2edb51948e9320f9.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/9ae8c9ba1bae216a5598fa2edb51948e9320f9.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/3748c6c238002807d2170263c9bc4838bb9df4.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/3748c6c238002807d2170263c9bc4838bb9df4.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/3748c6c238002807d2170263c9bc4838bb9df4.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/8a22961b631ecbcaae22e7993fa61963d913ec.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/8a22961b631ecbcaae22e7993fa61963d913ec.debug
 	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/8a22961b631ecbcaae22e7993fa61963d913ec.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cc
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cc/97a4cedad1ff459f593b444a7ae079860a153a.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cc/97a4cedad1ff459f593b444a7ae079860a153a.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cc/97a4cedad1ff459f593b444a7ae079860a153a.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/9ae8c9ba1bae216a5598fa2edb51948e9320f9.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/9ae8c9ba1bae216a5598fa2edb51948e9320f9.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/9ae8c9ba1bae216a5598fa2edb51948e9320f9.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/337fd009307f0c4166316017207a41a96cd96b.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/337fd009307f0c4166316017207a41a96cd96b.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/337fd009307f0c4166316017207a41a96cd96b.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/ff33ec355114e4b7f311e9b302e98aed0d07de.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/ff33ec355114e4b7f311e9b302e98aed0d07de.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/ff33ec355114e4b7f311e9b302e98aed0d07de.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/8fa1bca49fb83ddf841fc12fa8f033a9ecd347.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/8fa1bca49fb83ddf841fc12fa8f033a9ecd347.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/63/8fa1bca49fb83ddf841fc12fa8f033a9ecd347.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/88cec3bffdcd2f0965654850022f3a67f856d1.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/88cec3bffdcd2f0965654850022f3a67f856d1.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/88cec3bffdcd2f0965654850022f3a67f856d1.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/34196d736cafb73ff2a405fa9ead2814473435.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/34196d736cafb73ff2a405fa9ead2814473435.debug
 	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/34196d736cafb73ff2a405fa9ead2814473435.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/20bed5f56b550cd6fdd32ccda126d98af4d6b6.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/20bed5f56b550cd6fdd32ccda126d98af4d6b6.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/20bed5f56b550cd6fdd32ccda126d98af4d6b6.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/d473c343380814b42a94eef8d2a955b9ee7247.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/d473c343380814b42a94eef8d2a955b9ee7247.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/d473c343380814b42a94eef8d2a955b9ee7247.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cc
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cc/97a4cedad1ff459f593b444a7ae079860a153a.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cc/97a4cedad1ff459f593b444a7ae079860a153a.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cc/97a4cedad1ff459f593b444a7ae079860a153a.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/c08951ea27fdaed6cacafa20a6bbab8c0ad7a3.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/c08951ea27fdaed6cacafa20a6bbab8c0ad7a3.debug
 	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/c08951ea27fdaed6cacafa20a6bbab8c0ad7a3.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/d473c343380814b42a94eef8d2a955b9ee7247.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/d473c343380814b42a94eef8d2a955b9ee7247.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/d473c343380814b42a94eef8d2a955b9ee7247.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/c6b16f0a6e10166d660e9dfe1d76517e45a672.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/c6b16f0a6e10166d660e9dfe1d76517e45a672.debug
 	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/c6b16f0a6e10166d660e9dfe1d76517e45a672.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/ff33ec355114e4b7f311e9b302e98aed0d07de.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/ff33ec355114e4b7f311e9b302e98aed0d07de.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/ff33ec355114e4b7f311e9b302e98aed0d07de.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/337fd009307f0c4166316017207a41a96cd96b.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/337fd009307f0c4166316017207a41a96cd96b.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/337fd009307f0c4166316017207a41a96cd96b.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/fe985a2df07ea4c734f23516ddc41b478bd475.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/fe985a2df07ea4c734f23516ddc41b478bd475.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/fe985a2df07ea4c734f23516ddc41b478bd475.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0765f3d6e1fe900d289d743073a335e3839d81.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0765f3d6e1fe900d289d743073a335e3839d81.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0765f3d6e1fe900d289d743073a335e3839d81.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/20bed5f56b550cd6fdd32ccda126d98af4d6b6.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/20bed5f56b550cd6fdd32ccda126d98af4d6b6.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/20bed5f56b550cd6fdd32ccda126d98af4d6b6.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e45f95fa13768c65999b6845072dfa89635d42.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e45f95fa13768c65999b6845072dfa89635d42.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e45f95fa13768c65999b6845072dfa89635d42.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/448724a7a8ee985f158f2f70f7e23a69e57d28.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/448724a7a8ee985f158f2f70f7e23a69e57d28.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/448724a7a8ee985f158f2f70f7e23a69e57d28.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/e57f229ed20a727ddc43f18ad9b63cb7b731b8.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/e57f229ed20a727ddc43f18ad9b63cb7b731b8.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/e57f229ed20a727ddc43f18ad9b63cb7b731b8.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/3d48b0e9408e66262530a8f33fc0a4d547e955.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/3d48b0e9408e66262530a8f33fc0a4d547e955.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/3d48b0e9408e66262530a8f33fc0a4d547e955.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f5904f86af42f6e94d55583816ee9d30fe933c.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f5904f86af42f6e94d55583816ee9d30fe933c.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f5904f86af42f6e94d55583816ee9d30fe933c.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/69ce477b51d888ccaccbb5c5332b1b9dc33141.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/69ce477b51d888ccaccbb5c5332b1b9dc33141.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/69ce477b51d888ccaccbb5c5332b1b9dc33141.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf
 	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_reparametrisation debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/8f34b19853e33425d699c9717d35a79d5d6ee3.debug
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/8f34b19853e33425d699c9717d35a79d5d6ee3.debug
@@ -49401,51 +49474,16 @@
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb/a08e3bcf2e720d50a480b29752cce709b89907.debug
 	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens
 	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb/a08e3bcf2e720d50a480b29752cce709b89907.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/69ce477b51d888ccaccbb5c5332b1b9dc33141.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/69ce477b51d888ccaccbb5c5332b1b9dc33141.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/97/69ce477b51d888ccaccbb5c5332b1b9dc33141.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/73dbc56660e4f0b3d6b907f0bddd5cdf336822.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/73dbc56660e4f0b3d6b907f0bddd5cdf336822.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cbflib.tst_memory
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/73dbc56660e4f0b3d6b907f0bddd5cdf336822.debug debian/python3-cctbx/usr/bin/cbflib.tst_memory
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.getting_started debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/756af332257632f65aef4388b557d7c58b01d3.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/756af332257632f65aef4388b557d7c58b01d3.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.getting_started
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/756af332257632f65aef4388b557d7c58b01d3.debug debian/python3-cctbx/usr/bin/cctbx.getting_started
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/f4911a70fdaceeda0ace8bc17fd2b4e56b3be0.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/f4911a70fdaceeda0ace8bc17fd2b4e56b3be0.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/f4911a70fdaceeda0ace8bc17fd2b4e56b3be0.debug debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/b2b39807997e5b94d075d8cccfb0cd190ec53d.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/b2b39807997e5b94d075d8cccfb0cd190ec53d.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/b2b39807997e5b94d075d8cccfb0cd190ec53d.debug debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx_blobs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/cb10ba0ca8e8a204ef6a20962b375423fa4be6.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/cb10ba0ca8e8a204ef6a20962b375423fa4be6.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx_blobs
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/cb10ba0ca8e8a204ef6a20962b375423fa4be6.debug debian/python3-cctbx/usr/bin/cctbx_blobs
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6f
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6f/a53f638d8803a1b4f094d310b3cbf3f3264be1.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6f/a53f638d8803a1b4f094d310b3cbf3f3264be1.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6f/a53f638d8803a1b4f094d310b3cbf3f3264be1.debug debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/1140c85abe26599c84926bbe66db6f5ef393e0.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/1140c85abe26599c84926bbe66db6f5ef393e0.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/43/1140c85abe26599c84926bbe66db6f5ef393e0.debug debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib
-	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2
-	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.find_distances debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/6140b3981ca232c7110e2ef88a45daed32d221.debug
-	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/6140b3981ca232c7110e2ef88a45daed32d221.debug
-	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.find_distances
-	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/6140b3981ca232c7110e2ef88a45daed32d221.debug debian/python3-cctbx/usr/bin/cctbx.find_distances
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0765f3d6e1fe900d289d743073a335e3839d81.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0765f3d6e1fe900d289d743073a335e3839d81.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0765f3d6e1fe900d289d743073a335e3839d81.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem
+	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52
+	objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/0695972152743ef620da795d41b8b365e0d9de.debug
+	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/0695972152743ef620da795d41b8b365e0d9de.debug
+	strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy
+	objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52/0695972152743ef620da795d41b8b365e0d9de.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz
 	cp --reflink=auto -a debian/python3-cctbx/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz
 	rm -fr debian/python3-cctbx/usr/lib/debug/.dwz
@@ -49481,358 +49519,358 @@
 	rm -f debian/python3-cctbx/DEBIAN/shlibs
    dh_shlibdeps -a -O--buildsystem=pybuild
 	install -m0755 -d debian/libcctbx0/DEBIAN
-	dpkg-shlibdeps -Tdebian/libcctbx0.substvars debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1
+	dpkg-shlibdeps -Tdebian/libcctbx0.substvars debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1
 	install -m0755 -d debian/python3-cctbx/DEBIAN
-	dpkg-shlibdeps -Tdebian/python3-cctbx.substvars debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.find_distances
-dpkg-shlibdeps: warning: symbol PyObject_CallFunction used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
-dpkg-shlibdeps: warning: symbol PyExc_RuntimeError used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
+	dpkg-shlibdeps -Tdebian/python3-cctbx.substvars debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
 dpkg-shlibdeps: warning: symbol _Py_Dealloc used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
+dpkg-shlibdeps: warning: symbol PyExc_IndexError used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
 dpkg-shlibdeps: warning: symbol PyObject_IsTrue used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
-dpkg-shlibdeps: warning: symbol PyErr_SetString used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
 dpkg-shlibdeps: warning: symbol _Py_NoneStruct used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
 dpkg-shlibdeps: warning: symbol PyImport_ImportModule used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
 dpkg-shlibdeps: warning: symbol PyRange_Type used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
-dpkg-shlibdeps: warning: symbol PyExc_IndexError used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin
+dpkg-shlibdeps: warning: symbol PyExc_RuntimeError used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
+dpkg-shlibdeps: warning: symbol PyObject_CallFunction used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
+dpkg-shlibdeps: warning: symbol PyErr_SetString used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin
 dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 34 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
-dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyList_Append: it's probably a plugin
-dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin
-dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin
-dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 34 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin
-dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_AsUTF8String: it's probably a plugin
-dpkg-shlibdeps: warning: 51 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin
+dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
+dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin
+dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_KeyError: it's probably a plugin
+dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
-dpkg-shlibdeps: warning: 22 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
+dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_GetItem: it's probably a plugin
+dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
+dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_GetItem: it's probably a plugin
+dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin
 dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
+dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_HasAttrString: it's probably a plugin
+dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin
+dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
-dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
+dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyComplex_FromDoubles: it's probably a plugin
+dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_AsUTF8String: it's probably a plugin
+dpkg-shlibdeps: warning: 51 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
 dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
-dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
-dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
-dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
 dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin
-dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
+dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
+dpkg-shlibdeps: warning: 22 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
-dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
 dpkg-shlibdeps: warning: diversions involved - output may be incorrect
  diversion by libc6 from: /lib64/ld-linux-x86-64.so.2
 dpkg-shlibdeps: warning: diversions involved - output may be incorrect
  diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyMem_Calloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFrame_GetCode: it's probably a plugin
 dpkg-shlibdeps: warning: 131 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyComplex_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
-dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
-dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin
 dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_Size: it's probably a plugin
+dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_TypeError: it's probably a plugin
+dpkg-shlibdeps: warning: 32 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
-dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
+dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
+dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin
 dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin
+dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
-dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
-dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _PyObject_New: it's probably a plugin
-dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin
-dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_GetItem: it's probably a plugin
 dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PySlice_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
+dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin
-dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetIter: it's probably a plugin
+dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin
 dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_HasAttrString: it's probably a plugin
+dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin
-dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin
+dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyIter_Check: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
+dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
 dpkg-shlibdeps: warning: 27 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_Size: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin
+dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
+dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
+dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
-dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBytes_FromStringAndSize: it's probably a plugin
+dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
-dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin
-dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin
-dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallFunction: it's probably a plugin
-dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin
+dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
-dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_RuntimeError: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin
+dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin
-dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
 dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
 dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_HasAttrString: it's probably a plugin
+dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
+dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallFunction: it's probably a plugin
 dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
-dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyComplex_FromDoubles: it's probably a plugin
-dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
 dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_AsLong: it's probably a plugin
-dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_TypeError: it's probably a plugin
-dpkg-shlibdeps: warning: 32 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyCapsule_GetPointer: it's probably a plugin
-dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin
 dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin
-dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
-dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin
-dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
-dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyIter_Next: it's probably a plugin
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin
 dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin
+dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin
+dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin
+dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all)
+dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin
+dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
    dh_installdeb -O--buildsystem=pybuild
 	install -m0755 -d debian/libcctbx0/DEBIAN
 	install -p -m0644 debian/.debhelper/generated/libcctbx0/triggers debian/libcctbx0/DEBIAN/triggers
@@ -49854,34 +49892,34 @@
 	echo misc:Depends= >> debian/libcctbx-dev.substvars
 	echo misc:Pre-Depends= >> debian/libcctbx-dev.substvars
 	dpkg-gencontrol -plibcctbx-dev -ldebian/changelog -Tdebian/libcctbx-dev.substvars -cdebian/control -Pdebian/libcctbx-dev
-	install -m0755 -d debian/libcctbx0/DEBIAN
-	echo misc:Depends= >> debian/libcctbx0.substvars
-	echo misc:Pre-Depends= >> debian/libcctbx0.substvars
-	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN
-	dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/.debhelper/libcctbx0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcctbx0-dbgsym "-DDepends=libcctbx0 (= \${binary:Version})" "-DDescription=debug symbols for libcctbx0" "-DBuild-Ids=05d43fd67983c38c0871490cb47c8abf6211318f 0dca604298e0d97404e92b98fd937d5b7e8528e2 25d5ebe42273136ac2ee0996deb514d6b679615f 312c143a7a5b22d4518ca06591ce84d19f009c3a 405358332e32e587444746d5af219458138b331e 4187a637a0caa6a1749389632672ab33341e611a 5c4d98b6a416b28980af40bcbd98d222d1f5f041 683c4461766a85cf5061e24fcf9085c8f4d48d1f 6f3ca9cc0c98a1104f02ce828cdb950578776846 7eccb96d9728f3ebc806cc6345e78c27025454ac 8d2462218972f5509fd357b69894ed7af4d01406 96a04081f62ef33e02b538bb8f74e9e7e444c221 96e7dd1e477e54d45e37e3609d61aa84e908939d 9beda07d595af1017d3e51b1c4e2e03d0a8ff0da a5363ce94189e7db3db73147868ae2ccd6737c72 cf57ff91ce7421294925a4c21d6d7dedb12c50cf d3d0fe33333ea8c4fc28fab6fa8b4827667cb7de e8759fd27ecd1c8e9cbd44225efbd853c91097ce f65c787573efa16d60122524da217ae742aa3d52" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
 	install -m0755 -d debian/python3-cctbx/DEBIAN
 	echo misc:Depends= >> debian/python3-cctbx.substvars
 	echo misc:Pre-Depends= >> debian/python3-cctbx.substvars
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN
 	dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/.debhelper/python3-cctbx/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-cctbx-dbgsym "-DDepends=python3-cctbx (= \${binary:Version})" "-DDescription=debug symbols for python3-cctbx" "-DBuild-Ids=006f56f85b2305d538ce42c28ac52196067e8f7c 013748c6c238002807d2170263c9bc4838bb9df4 03f416a213ab42b958a0674f3d587968af25a7d9 08b5ad6375a96361c06c81cb6299ab7eb8b7b3ac 0aad6f0364b818436fab4fb33fa4474136fdc691 0b69f2b7c69ab239d5a8f96a67e4d9d285c56f97 0c06b31b834ed1c0cde3ed66bd733067172a4b5b 0da1b4b2d5d59a2c7ab7272b773addbb42851e71 0ecb10ba0ca8e8a204ef6a20962b375423fa4be6 11ccebdadbb02b966f674e4c93454e6bd84628cf 14c498e19c975a5ddd3cac21b531507e1feaaebb 16faa2f4a217024c8778008ff8334956be904913 1a6dc48704cafb8789cf9085531843f9cdd5831b 1a83eddd96f0a1e645ea1e4d301518b1918610c5 1cb31eb83709eed7c287dbbb26a6a1886ab3786d 1cfc3274f0cb260c070f0a1ec9d2044981d5e13e 1e6da9f62f00b56978882d1682e091f80f0db888 1e80d93e8788bbe9ee891de5a5726b8ddb067185 2341bbc041aaebd09c9c1c265db4b459add8d7f3 2460669d03e3cdf300cddb521946e42abe56d16a 259a11e923ff41c42664549da9cf51d3980c8d2b 25f2d110947ec73aba311048f1759d768855a7c1 26e082b9765fa666cf54ece4c69f796cdde51fc9 29c3886dbe228c3faeae147f29204d90cc39d4fc 2ab2b39807997e5b94d075d8cccfb0cd190ec53d 2dc1143a09d1e1b74d14c756f063b9f9dccf7593 2e5549ac230ddacee72a642f183094e3fe3afd9f 2e6df91aa602cf84dd6ef642ca6df9a7bf86a0fc 318715dd8b4a6a991cd56e13f7cb5e47459744ff 32cc667e4d467af722d175bf4d47013c881d78db 32e7360ef23cdc708578ea90b7ccda3b8511ed6c 344cd5aaea1b1982d6cc9efef96020a3bed5b44f 34b768f133f2adea817965c8a946253ef0d07480 35a11e8feca49eecfdd809803faf6383760f0551 36448724a7a8ee985f158f2f70f7e23a69e57d28 36e792fc4be04ed19c77a851c92450fbcc5ed85a 3709788a1add5217f976952e99a48a6b552113a7 373a9ca53b7f8bc50cb51e938ad5fb57feee9b33 38f705365f704ce687b8e6811726cedab82b607a 39f3fd203e9d2e3dd56fc5705026aa8699e590c9 3af1a0178d97bac5964ddd739a02d968e6c5e0fe 3cd5eab4b9e9fb75aa2dd3e23c1467380e319911 3ead2221eba51201787bd4e6ff2241b038d36c1f 3f564800d16eb39028908b473a495151726d11ca 40fb346182bff20c9ff10c55bb9cbca692b488b7 42ff33ec355114e4b7f311e9b302e98aed0d07de 431140c85abe26599c84926bbe66db6f5ef393e0 4346eaf173cc4d2b45bcb063608ea93f11abbffb 45a85996f6f5f668df1ed5591ff141c4654b113b 4779a53441022ca0fb7c737951f83f6caa1c4eba 47e363c500fb9f152e60218fd533e5372e333e2f 493acd67df3349e7f163609998832e2a7e9ff3b6 4c486bd264c85ee371b89c4f870cabc8c0523c56 4da831208585baaaee88fe37254fdfa5b3d38ae9 5165c8185f58bddedcdfe8935c79a5e3099cac3a 518911080f5ee5b6943fa363fe67f0b4ad76eac5 51dde8f2940f3c72fa72e887c1a1ed41e46671f4 520695972152743ef620da795d41b8b365e0d9de 523954791df97225f6569b56a85fd8aeef9d610e 544eaadbc0874067701b3337dcff6c3753685e68 54a657af3eebe71f65a21832d204eeb1de1033b7 569732b660416bf8e530d096c1010fe51b9355bc 56b214969e2e5b3dc57eadb7f9baeca58a5d48d5 56e4c1ba799eea1cf2aded0f76cb596b6d7d82da 57ed74750a75c88ac7e17724558b8442e0199389 5d262a6fe0ccf1442818186433748b8d2685aa79 5f953ce1a11e9c7656ca0fc5e2c62fdda240d70a 60e1218d8e8e9783af83fe6e7ef2b3339f93d7de 638fa1bca49fb83ddf841fc12fa8f033a9ecd347 63b96400cdd4c9c21db0b6c1472767a69627e7ca 64701b503c6af55982902d6f51f2de46e406b46d 66de1b6b506db4eb92c7ea11fb33d48fc2e20222 6899e48331515c2dfaee1e16397cdb3a92dad00f 6af4911a70fdaceeda0ace8bc17fd2b4e56b3be0 6ba53107a8c8c0205970162f00792f28cfdf8a8d 6db99fec1ce4a26a4956777fbff25ec5ebc45655 6dbd57d51e76974d26362b867c16c96e5221b8cb 6de0213a16c9e4e5edee90d2171aa39b297ce144 6fa53f638d8803a1b4f094d310b3cbf3f3264be1 76e7b80af8cd1c0513a05eebf00b37c73f108c52 7800a1d9ba84f895beaaa1bb7f28cd4d30416d30 818975d01e1be7513882242364b29a796e955f2b 82fe985a2df07ea4c734f23516ddc41b478bd475 84261f93771cfd13195debb332ff3e61637c7960 8488cec3bffdcd2f0965654850022f3a67f856d1 8535bb8b619dc11597a83cdb47292dad42463901 85a157c21b9930822f0e86081fa4fcf1b3abc212 87424ec1b4f5f97bcc28b7bfd7c6a2199fd3c32e 87f6cd4a0ef8d2873ed951a9a1ce086cb3d51b95 88c14ddc21a4d2a2b3ec2eea0317f6121381fce8 8952b40a86dd51ddcfeed8d09208fa71b9718112 8b7adc1849ca2e81c566ec5367dccdd77bd7c2f3 8bf6a482f01b788f17164c79e3868151469ce07f 8d4b972959cf569340c7e66be0f2d0692605dd15 8f9400c016e669376606f8488fb70e30d157a981 8fb99b46515d73ae5035be4c759cd19fb5c09e94 900765f3d6e1fe900d289d743073a335e3839d81 9134c805d3a896946c66117d240177adf9048a98 9136c27299c4d191c3a9177fa4e9ed262c723a96 9143d95631e03f416cd052dd94d8bdf3148e6409 919f9750350895283ed2e4aa3e0a907364ee915a 91f40d77549b3bdadb0e6ca2513e7c9b076561c8 9214ee787c5b920fcd2a318b5bcb12dd09954fcb 922a514e3af7eba120b63860345873df42a33511 9377db996deffe0edef0a591f936b4d39fc25f69 93aad590fa945fd4ea77238503d60d2495a60a94 93b3c0b2eb7389bf1a0222b5c4f33d29c4759e36 945744ce8e135e95d2c1c02e94f3b6985e4edf9c 960826e74cdf9f457dc6c526abbfa2bae01ccb71 960f3b25ac7067db90727695c97be1c9a516e0bc 9769ce477b51d888ccaccbb5c5332b1b9dc33141 976a047cb94ef45c0f5a175e999ad7ee6d1a3ca2 9931a25060d74902d4763e4930aba47d31b197fa 9c11bce9d64e4ffe59c0b022fe2530416ff2245c 9c80c13525f1b7313a6ed1915401365dd05dae7c 9cb9546bebae815004b166f750b8dc5ca3fc75dc 9e4b10bc75641c8d06eeb599ba09b03231e23b24 9f51caafcdae65998c0d8b638fc2dfb7aa236866 9fcb9c76ddc7832cdd6d03f4c1ea7d4896844829 a0e45f95fa13768c65999b6845072dfa89635d42 a211c9b655f1558082e8de88071fe9da146a94e7 a514c74c2295ddd21b93a8d94891087564e21f96 a5653f93ae5bf18d0ba55f06b37928b30d3dc12d a6ed91f3596cc5e63e26ef35da968136e788f7c7 a80a69d11a709846bdb08e663a002b025e97b020 a9ff8290f134166a078c8e1a30c5ca666e428b0f aa53410686b2bcedc0079bc6acc636649f0ead2b aaf6f3eaf765acf4b1d189aad61f627a1614b665 ab2badf3cfb4ec057f47eeda9e8dd32d12e72a77 abbc79d35969e9b5d2adb51c043be626283fee99 ac377cf8c7a389446d0b7a6104d1ef6630c2f1a3 ace94d532584dff4c160382a947563e2ba489510 aeaa938034d58edbbabb5dbdf2c311b55481aa8f b14a4afc2f1a1896d4227ab465197ed59075f932 b226ce632960af4d4362ea13fb8417e21280b598 b234196d736cafb73ff2a405fa9ead2814473435 b26140b3981ca232c7110e2ef88a45daed32d221 b37fcff47b45c7005bbd2dc276f86713134fbe4d b4337fd009307f0c4166316017207a41a96cd96b b4ab3f2378df6f73513f576d4d4600ecf310d8a9 b4d473c343380814b42a94eef8d2a955b9ee7247 b4dadbcd98521b705342b62517acf913a43cc356 b56703a7c8559a679dd0b966dd55bf7807fc40bb b6cfe6f8af238d870592e9c25d66676da57f9165 b86e075dffd22ca747eecf1760a2e2f9bbc93ed6 b8b79aaecff27cdd25325b3072e6353695204754 b93a3e38d25cb9381d4bc62be575a5505ab4cfa8 bafeafb45ab9e68dd114f77cf1c1204045f36566 bb5e0da477482b768238768c98bdf191fa13b5b0 bc8232b2cbc70f37bcc7cf911b82353297b01cc9 bd275fa6cca4ad1288f19cdc769fd0f2f4b92e03 be9b2290cf824d8837e02c8b64e4a6e0bce16707 bf8f34b19853e33425d699c9717d35a79d5d6ee3 bfc6b16f0a6e10166d660e9dfe1d76517e45a672 c0cc7959eb21798b0c6403ef6113a3d7ef69d0f6 c192eeef22df97f9fb1bf1165d513dd740edbb00 c1c2a9e2849fc8afaef0a583d5f21a8a1de1482a c1d5e266ce732b727090117a86104c8fc307ef73 c338ff968198b81be89ac9a2538b6be0a35c3cc7 c4bad405b0c0a48f07984023049db016f4a0d050 c5e80be1a8346e7ff78955856f455346b58824e0 c72a194a2c0ecd5117d45a906c93df060110331b caad3ea7290c0a3926b21adb3b3cf4dc073ee2fb cb8a22961b631ecbcaae22e7993fa61963d913ec cbf09f7ef12d04bc074feafe20c6bbdb4ceb1060 cc97a4cedad1ff459f593b444a7ae079860a153a cd0838f779054aa294a97529aa96a723e65e8d35 cdc08951ea27fdaed6cacafa20a6bbab8c0ad7a3 ce8032ca2d3a0734ea3c1047e2f1be7c6930505b cf73dbc56660e4f0b3d6b907f0bddd5cdf336822 d2aedde69b49a2f95839003dc3866ba7dc8d1b6b d2f5904f86af42f6e94d55583816ee9d30fe933c d420bed5f56b550cd6fdd32ccda126d98af4d6b6 d78ea428b700b003727faae1c375d251b4d464aa d818fe76f681ddb8efc5cf210ec8a41455b8ebfe d8ee4bcfd96c847a1a69b2c2bebb939fed4e9ccf da9d89b7d5807aed76e424d446d7a0db9da76c64 dbb461dae722daa0cff80819f9f89c13ba37d281 e0faa06ad1954ecaca621cb41cb8d1b12ca19385 e2cd76170cc52e04a6f0c9b383735c85dacb6d2a e2eaed8e6a9b7f210f5cb400423832dfa039b8fb e3793e175dcef9c4b32200dcba6064e93166fc15 e423adf86db5b5604897241070224bcab457c905 e5abfdfb842e50d22f753b8752f4d42b2b6669f0 e85c3b615a1a71e68982cc3aff4d66a13ce44aa6 e89ae8c9ba1bae216a5598fa2edb51948e9320f9 ea1120436ecdca9927199af2d3aeadd33d43f65e eba08e3bcf2e720d50a480b29752cce709b89907 ee3f3f8574074b3a87804b8fc8fdfb480cbd90ef f15211efd5ef83c0f2a216855bcf5aa2f74374fc f23d48b0e9408e66262530a8f33fc0a4d547e955 f2f29e8370a510b52813cce17eaa797ca59a8c8d f37345c223c591ad19904bb7dc6920de25dff2a7 f43e36a79552675417dea5fce4d93700716d1881 f48cf2505fc360a32e000fbe2ebe4691d56fe014 f57b81a0e9f7ffc84bc2144e69d71712c96804a1 f7b00ff63bea70e81794853f7ba6e36ef1341a7f f8756af332257632f65aef4388b557d7c58b01d3 fa1396331f8b5707b63763f6509eb1b077c85589 fae57f229ed20a727ddc43f18ad9b63cb7b731b8 fb1ef0e564f288853e2268fa2d6fe872df6c464c feecfadd0f5ad6066c936ff1c365bcfcc04c79bb" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
+	install -m0755 -d debian/libcctbx0/DEBIAN
+	echo misc:Depends= >> debian/libcctbx0.substvars
+	echo misc:Pre-Depends= >> debian/libcctbx0.substvars
+	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN
+	dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/.debhelper/libcctbx0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcctbx0-dbgsym "-DDepends=libcctbx0 (= \${binary:Version})" "-DDescription=debug symbols for libcctbx0" "-DBuild-Ids=05d43fd67983c38c0871490cb47c8abf6211318f 0dca604298e0d97404e92b98fd937d5b7e8528e2 25d5ebe42273136ac2ee0996deb514d6b679615f 312c143a7a5b22d4518ca06591ce84d19f009c3a 405358332e32e587444746d5af219458138b331e 4187a637a0caa6a1749389632672ab33341e611a 5c4d98b6a416b28980af40bcbd98d222d1f5f041 683c4461766a85cf5061e24fcf9085c8f4d48d1f 6f3ca9cc0c98a1104f02ce828cdb950578776846 7eccb96d9728f3ebc806cc6345e78c27025454ac 8d2462218972f5509fd357b69894ed7af4d01406 96a04081f62ef33e02b538bb8f74e9e7e444c221 96e7dd1e477e54d45e37e3609d61aa84e908939d 9beda07d595af1017d3e51b1c4e2e03d0a8ff0da a5363ce94189e7db3db73147868ae2ccd6737c72 cf57ff91ce7421294925a4c21d6d7dedb12c50cf d3d0fe33333ea8c4fc28fab6fa8b4827667cb7de e8759fd27ecd1c8e9cbd44225efbd853c91097ce f65c787573efa16d60122524da217ae742aa3d52" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
+	chmod 0644 -- debian/libcctbx-dev/DEBIAN/control
 	chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/control
 	dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/python3-cctbx
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/control
 	dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/libcctbx0
-	chmod 0644 -- debian/libcctbx-dev/DEBIAN/control
 	chmod 0644 -- debian/libcctbx0/DEBIAN/control
 	chmod 0644 -- debian/python3-cctbx/DEBIAN/control
    dh_md5sums -O--buildsystem=pybuild
+	install -m0755 -d debian/python3-cctbx/DEBIAN
 	install -m0755 -d debian/libcctbx0/DEBIAN
 	install -m0755 -d debian/libcctbx-dev/DEBIAN
-	install -m0755 -d debian/python3-cctbx/DEBIAN
 	cd debian/libcctbx0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
 	cd debian/libcctbx-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
 	cd debian/python3-cctbx >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
 	chmod 0644 -- debian/libcctbx0/DEBIAN/md5sums
 	install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN
-	cd debian/.debhelper/libcctbx0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
 	chmod 0644 -- debian/libcctbx-dev/DEBIAN/md5sums
+	cd debian/.debhelper/libcctbx0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
 	chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/md5sums
 	chmod 0644 -- debian/python3-cctbx/DEBIAN/md5sums
 	install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN
@@ -49896,8 +49934,8 @@
 dpkg-deb: building package 'libcctbx0' in '../libcctbx0_2024.10+ds2+~3.22.1+ds1-5_amd64.deb'.
 dpkg-deb: building package 'libcctbx0-dbgsym' in '../libcctbx0-dbgsym_2024.10+ds2+~3.22.1+ds1-5_amd64.deb'.
 dpkg-deb: building package 'libcctbx-dev' in '../libcctbx-dev_2024.10+ds2+~3.22.1+ds1-5_amd64.deb'.
-dpkg-deb: building package 'python3-cctbx-dbgsym' in '../python3-cctbx-dbgsym_2024.10+ds2+~3.22.1+ds1-5_amd64.deb'.
 dpkg-deb: building package 'python3-cctbx' in '../python3-cctbx_2024.10+ds2+~3.22.1+ds1-5_amd64.deb'.
+dpkg-deb: building package 'python3-cctbx-dbgsym' in '../python3-cctbx-dbgsym_2024.10+ds2+~3.22.1+ds1-5_amd64.deb'.
  dpkg-genbuildinfo --build=binary -O../cctbx_2024.10+ds2+~3.22.1+ds1-5_amd64.buildinfo
  dpkg-genchanges --build=binary -O../cctbx_2024.10+ds2+~3.22.1+ds1-5_amd64.changes
 dpkg-genchanges: info: binary-only upload (no source code included)
@@ -49905,12 +49943,14 @@
 dpkg-buildpackage: info: binary-only upload (no source included)
 dpkg-genchanges: info: not including original source code in upload
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/2558029/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/2558029/tmp/hooks/B01_cleanup finished
 I: unmounting dev/ptmx filesystem
 I: unmounting dev/pts filesystem
 I: unmounting dev/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/4083414 and its subdirectories
-I: Current time: Thu Sep  3 22:19:28 -12 2026
-I: pbuilder-time-stamp: 1788517168
+I: removing directory /srv/workspace/pbuilder/2558029 and its subdirectories
+I: Current time: Sat Aug  2 18:27:21 +14 2025
+I: pbuilder-time-stamp: 1754108841